Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1017 Ceratophyllum demersum HOM05D006791 ORTHO05D008221 9.1e-107 390.2 190 100.0
CDE09G0276 Ceratophyllum demersum HOM05D006791 ORTHO05D008221 1.9e-48 196.4 106 90.6
Nn2g10715 Nelumbo nucifera HOM05D006791 ORTHO05D008221 8.2e-31 137.9 94 71.3
Manes.07G103500 Manihot esculenta HOM05D006791 ORTHO05D008221 1.1e-30 137.5 106 65.1
Actinidia03042 Actinidia chinensis HOM05D006791 ORTHO05D008221 1.8e-30 136.7 93 68.8
Lj8A97G46 Lonicera japonica HOM05D006791 ORTHO05D008221 1.8e-30 136.7 93 71.0
Haze_16919 Corylus avellana HOM05D006791 ORTHO05D008221 3.1e-30 136.0 93 67.7
CSS0049359 Camellia sinensis var. sinensis HOM05D006791 ORTHO05D008221 4.1e-30 135.6 91 68.1
GSVIVG01016310001 Vitis vinifera HOM05D006791 ORTHO05D008221 4.1e-30 135.6 93 71.0
Sed0012525 Sechium edule HOM05D006791 ORTHO05D008221 6.9e-30 134.8 127 52.8
CSS0037701 Camellia sinensis var. sinensis HOM05D006791 ORTHO05D008221 9.0e-30 134.4 91 67.0
Ca_10581_v3 Cicer arietinum L. HOM05D006791 ORTHO05D008221 9.0e-30 134.4 93 66.7
CAN.G131.1 Capsicum annuum HOM05D006791 ORTHO05D008221 1.2e-29 134.0 93 67.7
Nitab4.5_0000233g0130 Nicotiana tabacum HOM05D006791 ORTHO05D008221 1.2e-29 134.0 93 67.7
PGR142G3028 Punica granatum HOM05D006791 ORTHO05D008221 1.5e-29 133.7 94 66.0
Dinv31358 Davidia involucrata HOM05D006791 ORTHO05D008221 2.0e-29 133.3 93 67.7
Nitab4.5_0004081g0030 Nicotiana tabacum HOM05D006791 ORTHO05D008221 2.0e-29 133.3 93 67.7
CiPaw.01G274700 Carya illinoinensis HOM05D006791 ORTHO05D008221 2.6e-29 132.9 120 55.8
Sopen02g013520 Solanum pennellii HOM05D006791 ORTHO05D008221 3.4e-29 132.5 93 66.7
Oeu033855.1 Olea europaea HOM05D006791 ORTHO05D008221 4.5e-29 132.1 93 71.0
Sc20g0001960 Simmondsia chinensis HOM05D006791 ORTHO05D008221 4.5e-29 132.1 93 65.6
ATR0759G009 Amborella trichopoda HOM05D006791 ORTHO05D008221 5.9e-29 131.7 92 66.3
MBI14_g40667_MAGBIO Magnolia biondii HOM05D006791 ORTHO05D008221 5.9e-29 131.7 93 66.7
Medtr1g095580 Medicago truncatula HOM05D006791 ORTHO05D008221 5.9e-29 131.7 93 64.5
Psat6g185200 Pisum sativum HOM05D006791 ORTHO05D008221 5.9e-29 131.7 93 64.5
TAR633G1431 Trochodendron aralioides HOM05D006791 ORTHO05D008221 5.9e-29 131.7 93 67.7
ClCG09G020610 Citrullus lanatus HOM05D006791 ORTHO05D008221 7.6e-29 131.3 93 63.4
Sp5g10000 Schrenkiella parvula HOM05D006791 ORTHO05D008221 7.6e-29 131.3 93 67.7
THA.LOC104802594 Tarenaya hassleriana HOM05D006791 ORTHO05D008221 7.6e-29 131.3 93 68.8
MD07G1176900 Malus domestica HOM05D006791 ORTHO05D008221 1.0e-28 131.0 93 65.6
Solyc02g062520.3 Solanum lycopersicum HOM05D006791 ORTHO05D008221 1.0e-28 131.0 93 65.6
Thecc.10G070300 Theobroma cacao HOM05D006791 ORTHO05D008221 1.3e-28 130.6 93 65.6
TPR.G1805 Trifolium pratense HOM05D006791 ORTHO05D008221 1.3e-28 130.6 93 64.5
Peaxi162Scf00108g00912 Petunia axillaris HOM05D006791 ORTHO05D008221 2.2e-28 129.8 92 65.2
Ciclev10033672m.g Citrus clementina HOM05D006791 ORTHO05D008221 2.9e-28 129.4 92 65.2
Duzib106G0039 Durio zibethinus HOM05D006791 ORTHO05D008221 2.9e-28 129.4 91 67.0
Cpa.g.sc466.9 Carica papaya HOM05D006791 ORTHO05D008221 3.8e-28 129.0 104 59.6
Thhalv10010446m.g Eutrema salsugineum HOM05D006791 ORTHO05D008221 3.8e-28 129.0 93 66.7
RcHm_v2.0_Chr1g0363851 Rosa chinensis HOM05D006791 ORTHO05D008221 3.8e-28 129.0 93 64.5
MELO3C002896.2 Cucumis melo HOM05D006791 ORTHO05D008221 5.0e-28 128.6 93 63.4
Potri.008G042000 Populus trichocarpa HOM05D006791 ORTHO05D008221 5.0e-28 128.6 93 65.6
SalBow3G2210 Salvia bowleyana HOM05D006791 ORTHO05D008221 5.0e-28 128.6 93 66.7
arahy.Tifrunner.gnm1.ann1.7LH3TR Arachis hypogaea HOM05D002197 ORTHO05D008221 8.4e-28 127.9 93 62.4
Sabra08G0028900 Salix brachista HOM05D006791 ORTHO05D008221 8.4e-28 127.9 93 64.5
Aa31LG10G7360 Aethionema arabicum HOM05D006791 ORTHO05D008221 1.1e-27 127.5 93 67.7
BraA03t13977Z Brassica rapa HOM05D006791 ORTHO05D008221 1.1e-27 127.5 93 65.6
Glyma.20G178400 Glycine max HOM05D006791 ORTHO05D008221 1.1e-27 127.5 93 60.2
SEGI_28811 Sequoiadendron giganteum HOM05D006791 ORTHO05D008221 1.1e-27 127.5 94 67.0
arahy.Tifrunner.gnm1.ann1.86UM3X Arachis hypogaea HOM05D006791 ORTHO05D008221 1.4e-27 127.1 93 62.4
EL10Ac2g03590 Beta vulgaris HOM05D006791 ORTHO05D008221 1.4e-27 127.1 111 58.6
CANSAT56G4374 Cannabis sativa HOM05D006791 ORTHO05D008221 1.4e-27 127.1 93 66.7
Carub.0005s1862 Capsella rubella HOM05D006791 ORTHO05D008221 1.9e-27 126.7 93 66.7
Cc02_g11450 Coffea canephora HOM05D006791 ORTHO05D008221 1.9e-27 126.7 93 64.5
VMungo0720G1069 Vigna mungo HOM05D006791 ORTHO05D008221 1.9e-27 126.7 93 63.4
CsaV3_5G025780 Cucumis sativus L. HOM05D006791 ORTHO05D008221 2.5e-27 126.3 93 62.4
ECA233G0118 Erigeron canadensis HOM05D000058 ORTHO05D008221 3.2e-27 125.9 93 66.7
FvH4_7g19860 Fragaria vesca HOM05D006791 ORTHO05D008221 3.2e-27 125.9 93 64.5
FAN06G1214 Fragaria x ananassa HOM05D006791 ORTHO05D008221 3.2e-27 125.9 93 64.5
PSO339G2849 Papaver somniferum HOM05D006791 ORTHO05D008221 3.2e-27 125.9 93 65.6
PSO384G4004 Papaver somniferum HOM05D006791 ORTHO05D008221 3.2e-27 125.9 93 65.6
QL08p056563 Quercus lobata HOM05D006791 ORTHO05D008221 3.2e-27 125.9 93 64.5
AUR62027952 Chenopodium quinoa HOM05D006791 ORTHO05D008221 4.2e-27 125.6 93 61.3
FAN03G2469 Fragaria x ananassa HOM05D006791 ORTHO05D008221 4.2e-27 125.6 93 64.5
FAN10G1968 Fragaria x ananassa HOM05D006791 ORTHO05D008221 4.2e-27 125.6 117 53.0
Lj5g0025337 Lotus japonicus HOM05D006791 ORTHO05D008221 4.2e-27 125.6 93 63.4
Aqoxy7G02243 Aquilegia oxysepala HOM05D006791 ORTHO05D008221 5.5e-27 125.2 97 62.9
Lalb_Chr06g0162211 Lupinus albus HOM05D006791 ORTHO05D008221 5.5e-27 125.2 93 62.4
Ah.10g032870 Amaranthus hybridus HOM05D006791 ORTHO05D008221 7.2e-27 124.8 93 62.4
AL5G32850 Arabidopsis lyrata HOM05D006791 ORTHO05D008221 7.2e-27 124.8 95 63.2
AT3G52260 Arabidopsis thaliana HOM05D006791 ORTHO05D008221 7.2e-27 124.8 93 65.6
SGA_v2.0_scaffold341G49357 Striga asiatica HOM05D006791 ORTHO05D008221 7.2e-27 124.8 93 65.6
TWI15G0354 Tripterygium wilfordii HOM05D006791 ORTHO05D008221 9.3e-27 124.4 105 57.1
DCAR_019128 Daucus carota HOM05D006791 ORTHO05D008221 1.2e-26 124.0 92 67.4
C07p46860 Brassica napus HOM05D006791 ORTHO05D008221 1.6e-26 123.6 93 63.4
BolC7t45202H Brassica oleracea HOM05D006791 ORTHO05D008221 1.6e-26 123.6 93 63.4
Phvul.007G093000 Phaseolus vulgaris HOM05D006791 ORTHO05D008221 1.6e-26 123.6 93 61.3
FAN01G2861 Fragaria x ananassa HOM05D002197 ORTHO05D008221 2.1e-26 123.2 91 64.8
AUR62020760 Chenopodium quinoa HOM05D006791 ORTHO05D008221 2.7e-26 122.9 93 61.3
HanXRQChr08g0219631 Helianthus annuus HOM05D006791 ORTHO05D008221 2.7e-26 122.9 93 62.4
Eucgr.G02814 Eucalyptus grandis HOM05D006791 ORTHO05D008221 3.5e-26 122.5 92 64.1
Gohir.A06G178100 Gossypium hirsutum HOM05D006791 ORTHO05D008221 4.6e-26 122.1 90 64.4
Gohir.D06G176900 Gossypium hirsutum HOM05D006791 ORTHO05D008221 4.6e-26 122.1 90 64.4
Gorai.010G204900 Gossypium raimondii HOM05D006791 ORTHO05D008221 4.6e-26 122.1 90 64.4
Hund22514 Selenicereus undatus HOM05D006791 ORTHO05D008221 6.1e-26 121.7 93 59.1
Migut.F01766 Erythranthe guttata HOM05D006791 ORTHO05D008221 1.0e-25 120.9 93 62.4
RcHm_v2.0_Chr5g0046841 Rosa chinensis HOM05D006791 ORTHO05D008221 1.0e-25 120.9 93 63.4
A03p48770 Brassica napus HOM05D006791 ORTHO05D008221 2.3e-25 119.8 93 62.4
Os03g0288500 Oryza sativa ssp. japonica HOM05D006791 ORTHO05D008221 5.1e-25 118.6 93 62.4
Zm00001eb013230 Zea mays HOM05D006791 ORTHO05D008221 1.1e-24 117.5 91 62.6
MSTRG.371 Avicennia marina HOM05D006791 ORTHO05D008221 1.5e-24 117.1 93 61.3
Pp3c20_1270 Physcomitrium patens HOM05D006791 ORTHO05D008221 1.5e-24 117.1 100 58.0
Prupe.2G215700 Prunus persica HOM05D006791 ORTHO05D008221 1.5e-24 117.1 84 66.7
SMO347G0025 Selaginella moellendorffii HOM05D006791 ORTHO05D008221 1.9e-24 116.7 93 59.1
unitig_747.g21478 Utricularia gibba HOM05D006791 ORTHO05D008221 9.7e-24 114.4 104 58.7
AagrBONN_evm.TU.Sc2ySwM_344.689 Anthoceros agrestis HOM05D006791 ORTHO05D008221 2.2e-23 113.2 91 58.2
Mapoly0002s0246 Marchantia polymorpha HOM05D006791 ORTHO05D008221 1.1e-22 110.9 94 58.5
Lsat_1_v5_gn_8_20021 Lactuca sativa HOM05D006791 ORTHO05D008221 1.4e-22 110.5 93 60.2
HPP92_001044 Vanilla planifolia HOM05D006791 ORTHO05D008221 2.7e-18 96.3 73 61.6
Atru.chr12.724 Acer truncatum HOM05D006791 ORTHO05D008221 1.1e-16 90.9 72 62.5
RcHm_v2.0_Chr2g0110391 Rosa chinensis HOM05D006791 ORTHO05D008221 1.8e-14 83.6 93 48.4
CARHR162020 Cardamine hirsuta HOM05D006791 ORTHO05D008221 2.0e-13 80.1 63 66.7
COL.COLO4_23714 Corchorus olitorius HOM05D006791 ORTHO05D008221 2.0e-13 80.1 62 66.1
Cre16.g689100 Chlamydomonas reinhardtii HOM05D006791 ORTHO05D008221 1.1e-11 74.3 68 48.5
RcHm_v2.0_Chr2g0104231 Rosa chinensis HOM05D006791 ORTHO05D008221 1.1e-11 74.3 63 61.9
Zm00001eb333930 Zea mays HOM05D006791 ORTHO05D008221 5.5e-11 72.0 64 59.4
Zm00001eb364040 Zea mays HOM05D006791 ORTHO05D008221 7.9e-10 68.2 64 57.8


User provided reference genes

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