Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G1004 Ceratophyllum demersum HOM05D005181 ORTHO05D034271 8.4e-149 530.4 281 100.0
CDE09G1040 Ceratophyllum demersum HOM05D005181 ORTHO05D034271 6.5e-109 397.9 237 90.7
TAR622G0602 Trochodendron aralioides HOM05D005181 ORTHO05D006086 4.6e-38 162.5 297 39.7
MBI10_g07295_MAGBIO Magnolia biondii HOM05D005181 ORTHO05D006086 5.2e-34 149.1 280 39.6
Lj5A154G68 Lonicera japonica HOM05D005181 ORTHO05D006086 7.1e-31 138.7 275 37.5
SGA_v2.0_scaffold168G38494 Striga asiatica HOM05D005181 ORTHO05D006086 7.1e-31 138.7 287 38.0
vmacro07281 Vaccinium macrocarpon HOM05D005181 ORTHO05D006086 4.6e-30 136.0 298 38.3
CiPaw.15G139300 Carya illinoinensis HOM05D005181 ORTHO05D006086 4.3e-28 129.4 295 35.6
SalBow1G8605 Salvia bowleyana HOM05D005181 ORTHO05D006086 4.7e-27 125.9 300 35.0
PSO675G7584 Papaver somniferum HOM05D005181 ORTHO05D006086 1.8e-26 124.0 292 37.0
ECA233G2213 Erigeron canadensis HOM05D005181 ORTHO05D006086 2.4e-26 123.6 282 35.8
Eucgr.B00857 Eucalyptus grandis HOM05D005181 ORTHO05D006086 5.2e-26 122.5 276 35.9
TWI60G1411 Tripterygium wilfordii HOM05D005181 ORTHO05D006086 1.5e-25 120.9 306 35.0
Nn4g24098 Nelumbo nucifera HOM05D005181 ORTHO05D006086 2.0e-25 120.6 299 37.1
Prupe.5G230100 Prunus persica HOM05D005181 ORTHO05D006086 2.6e-25 120.2 268 33.6
MD14G1233900 Malus domestica HOM05D005181 ORTHO05D006086 1.3e-24 117.9 276 33.3
Peaxi162Scf00683g00242 Petunia axillaris HOM05D005181 ORTHO05D006086 1.3e-24 117.9 239 37.7
Manes.14G168800 Manihot esculenta HOM05D005181 ORTHO05D006086 8.4e-24 115.2 276 35.5
Atru.chr9.956 Acer truncatum HOM05D005181 ORTHO05D006086 1.4e-23 114.4 302 34.8
Rhsim13G0100900 Rhododendron simsii HOM05D005181 ORTHO05D006086 4.2e-23 112.8 290 33.4
Actinidia37888 Actinidia chinensis HOM05D005181 ORTHO05D006086 7.1e-23 112.1 297 32.0
TWI81G0236 Tripterygium wilfordii HOM05D005181 ORTHO05D006086 2.7e-22 110.2 301 34.9
RcHm_v2.0_Chr7g0178781 Rosa chinensis HOM05D005181 ORTHO05D006086 3.5e-22 109.8 277 34.3
Migut.D01451 Erythranthe guttata HOM05D005181 ORTHO05D006086 7.8e-22 108.6 280 32.5
Aqoxy3G00439 Aquilegia oxysepala HOM05D005181 ORTHO05D006086 1.3e-21 107.8 289 34.3
FAN08G2561 Fragaria x ananassa HOM05D005181 ORTHO05D006086 5.1e-21 105.9 288 33.7
vmacro17791 Vaccinium macrocarpon HOM05D005181 ORTHO05D006086 1.1e-20 104.8 307 31.6
HanXRQChr05g0140931 Helianthus annuus HOM05D005181 ORTHO05D006086 1.9e-20 104.0 267 33.0
PGR083G0229 Punica granatum HOM05D005181 ORTHO05D006086 2.5e-20 103.6 291 33.3
GSVIVG01008395001 Vitis vinifera HOM05D002288 ORTHO05D006086 2.5e-20 103.6 286 32.2
FAN04G2630 Fragaria x ananassa HOM05D005181 ORTHO05D006086 7.3e-20 102.1 278 33.1
FAN13G0793 Fragaria x ananassa HOM05D005181 ORTHO05D006086 1.3e-19 101.3 288 31.9
FvH4_5g17070 Fragaria vesca HOM05D005181 ORTHO05D006086 2.1e-19 100.5 292 30.8
Solyc03g119050.4 Solanum lycopersicum HOM05D005181 ORTHO05D006086 3.6e-19 99.8 291 29.9
Cc04_g06620 Coffea canephora HOM05D002288 ORTHO05D002894 8.1e-19 98.6 282 29.4
PSO541G5122 Papaver somniferum HOM05D005181 ORTHO05D006086 2.4e-18 97.1 301 33.9
FAN18G0354 Fragaria x ananassa HOM05D005181 ORTHO05D006086 4.0e-18 96.3 281 32.4
Zm00001eb299750 Zea mays HOM05D005181 ORTHO05D006086 9.0e-18 95.1 294 31.0
Dinv24641 Davidia involucrata HOM05D005181 ORTHO05D006086 1.2e-17 94.7 158 41.1
Gohir.D12G268700 Gossypium hirsutum HOM05D005181 ORTHO05D006086 3.4e-17 93.2 274 32.1
Lsat_1_v5_gn_8_145621 Lactuca sativa HOM05D005181 ORTHO05D006086 3.4e-17 93.2 298 29.5
ATR0326G048 Amborella trichopoda HOM05D005181 ORTHO05D006086 4.5e-17 92.8 291 33.0
Gorai.008G288900 Gossypium raimondii HOM05D005181 ORTHO05D006086 5.8e-17 92.4 274 32.1
Medtr6g080360 Medicago truncatula HOM05D005181 ORTHO05D006086 7.6e-17 92.0 293 31.4
Haze_18792 Corylus avellana HOM05D005181 ORTHO05D006086 9.9e-17 91.7 268 31.3
Potri.015G041500 Populus trichocarpa HOM05D005181 ORTHO05D006086 9.9e-17 91.7 269 30.1
Duzib205G1340 Durio zibethinus HOM05D005181 ORTHO05D006086 2.2e-16 90.5 293 30.4
Lj2g0017806 Lotus japonicus HOM05D005181 ORTHO05D006086 4.9e-16 89.4 291 27.8
Cfa019696 Carpinus fangiana HOM05D005181 ORTHO05D006086 1.4e-15 87.8 271 31.7
TPR.G21383 Trifolium pratense HOM05D005181 ORTHO05D006086 1.4e-15 87.8 269 32.7
BraA01t01105Z Brassica rapa HOM05D005181 ORTHO05D006086 2.4e-15 87.0 283 31.1
Hma1.2p1_0669F.1_g200300 Hydrangea macrophylla HOM05D005181 ORTHO05D006086 3.2e-15 86.7 176 36.9
Nitab4.5_0012734g0010 Nicotiana tabacum HOM05D005181 ORTHO05D006086 3.2e-15 86.7 296 29.7
AL7G34390 Arabidopsis lyrata HOM05D005181 ORTHO05D006086 5.4e-15 85.9 269 30.1
A01p11570 Brassica napus HOM05D005181 ORTHO05D006086 5.4e-15 85.9 259 31.7
Sabra15G0055600 Salix brachista HOM05D005181 ORTHO05D006086 5.4e-15 85.9 269 29.7
CANSAT80G0160 Cannabis sativa HOM05D005181 ORTHO05D006086 7.1e-15 85.5 272 29.4
QL10p027571 Quercus lobata HOM05D005181 ORTHO05D006086 9.3e-15 85.1 266 31.2
CANSAT80G2311 Cannabis sativa HOM05D005181 ORTHO05D006086 1.2e-14 84.7 272 29.4
unitig_736.g22463 Utricularia gibba HOM05D005181 ORTHO05D006086 1.6e-14 84.3 278 30.6
Nitab4.5_0001158g0050 Nicotiana tabacum HOM05D005181 ORTHO05D006086 3.9e-13 79.7 305 28.9
SEGI_11728 Sequoiadendron giganteum HOM05D005181 ORTHO05D006086 3.9e-13 79.7 301 29.2
VMungo0464G1729 Vigna mungo HOM05D005181 ORTHO05D006086 3.9e-13 79.7 300 28.7
Aa31LG8G4950 Aethionema arabicum HOM05D005181 ORTHO05D006086 4.3e-12 76.3 339 24.8
BcaC09g51390 Brassica carinata HOM05D005181 ORTHO05D006086 5.6e-12 75.9 257 29.6
C01p13650 Brassica napus HOM05D005181 ORTHO05D006086 5.6e-12 75.9 254 29.9
Thhalv10020020m.g Eutrema salsugineum HOM05D005181 ORTHO05D006086 5.6e-12 75.9 294 25.2
VMungo0251G3066 Vigna mungo HOM05D001910 ORTHO05D006086 7.4e-12 75.5 281 29.2
BolC1t01339H Brassica oleracea HOM05D005181 ORTHO05D006086 9.6e-12 75.1 254 29.1
HPP92_001896 Vanilla planifolia HOM05D005181 ORTHO05D006086 1.6e-11 74.3 309 25.6
CAN.G1129.29 Capsicum annuum HOM05D005181 ORTHO05D006086 2.8e-11 73.6 285 27.7
Cpa.g.sc3.430 Carica papaya HOM05D005181 ORTHO05D006086 4.8e-11 72.8 327 28.1
Sc06g0002030 Simmondsia chinensis HOM05D005181 ORTHO05D006086 6.2e-11 72.4 84 47.6
THA.LOC104821834 Tarenaya hassleriana HOM05D005181 ORTHO05D006086 8.1e-11 72.0 324 28.4
TPR.G22856 Trifolium pratense HOM05D005181 ORTHO05D006086 1.1e-10 71.6 83 50.6
AL7G46060 Arabidopsis lyrata HOM05D005181 ORTHO05D006086 1.4e-10 71.2 260 28.8
BraA05t22002Z Brassica rapa HOM05D005181 ORTHO05D006086 3.1e-10 70.1 296 27.4
A05p31690 Brassica napus HOM05D005181 ORTHO05D006086 5.3e-10 69.3 296 27.0
Ciclev10007362m.g Citrus clementina HOM05D005181 ORTHO05D006086 5.3e-10 69.3 144 38.9
Lalb_Chr22g0353341 Lupinus albus HOM05D005181 ORTHO05D006086 6.9e-10 68.9 236 30.5
HanXRQChr07g0206911 Helianthus annuus HOM05D005181 ORTHO05D006086 9.0e-10 68.6 260 27.3
arahy.Tifrunner.gnm1.ann1.UX5VDV Arachis hypogaea HOM05D005181 ORTHO05D006086 1.2e-09 68.2 181 34.8
Oeu040446.1 Olea europaea HOM05D005181 ORTHO05D006086 1.2e-09 68.2 321 28.7
AUR62037061 Chenopodium quinoa HOM05D005181 ORTHO05D006086 1.5e-09 67.8 84 44.0
Sopen03g037940 Solanum pennellii HOM05D005181 ORTHO05D006086 1.5e-09 67.8 295 26.8
BolC5t33549H Brassica oleracea HOM05D005181 ORTHO05D006086 2.6e-09 67.0 222 28.8
MELO3C016456.2 Cucumis melo HOM05D005181 ORTHO05D006086 2.6e-09 67.0 286 29.0
Glyma.09G178000 Glycine max HOM05D005181 ORTHO05D006086 3.4e-09 66.6 284 26.8
Sed0017978 Sechium edule HOM05D005181 ORTHO05D006086 3.4e-09 66.6 291 28.5
BcaNung01760 Brassica carinata HOM05D005181 ORTHO05D006086 4.5e-09 66.2 228 29.8
BolC5t33518H Brassica oleracea HOM05D005181 ORTHO05D006086 1.3e-08 64.7 300 25.7
AUR62036514 Chenopodium quinoa HOM05D005181 ORTHO05D006086 1.3e-08 64.7 84 42.9
Sp7g18220 Schrenkiella parvula HOM05D005181 ORTHO05D006086 1.3e-08 64.7 293 27.3
arahy.Tifrunner.gnm1.ann1.QZK539 Arachis hypogaea HOM05D005181 ORTHO05D006086 1.7e-08 64.3 280 28.6
vmacro09848 Vaccinium macrocarpon HOM05D005181 ORTHO05D045129 1.7e-08 64.3 236 30.5
Ah.12g061970 Amaranthus hybridus HOM05D005181 ORTHO05D006086 3.8e-08 63.2 289 27.3
CsaV3_3G006700 Cucumis sativus L. HOM05D005181 ORTHO05D006086 4.9e-08 62.8 273 29.3
ClCG05G014580 Citrullus lanatus HOM05D005181 ORTHO05D006086 8.4e-08 62.0 292 29.1
Phvul.003G004600 Phaseolus vulgaris HOM05D005181 ORTHO05D006086 8.4e-08 62.0 136 35.3
Sed0027815 Sechium edule HOM05D005181 ORTHO05D044585 8.4e-08 62.0 201 30.8
DCAR_028712 Daucus carota HOM05D005181 ORTHO05D006086 3.2e-07 60.1 106 38.7
Phvul.004G151600 Phaseolus vulgaris HOM05D005181 ORTHO05D006086 7.1e-07 58.9 302 26.5
Os07g0139500 Oryza sativa ssp. japonica HOM05D005181 ORTHO05D034271 2.1e-06 57.4 114 36.8
C05p48090 Brassica napus HOM05D005181 ORTHO05D006086 2.7e-06 57.0 224 26.8
Psat1g033720 Pisum sativum HOM05D005181 ORTHO05D006086 7.9e-06 55.5 311 25.7


User provided reference genes

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