Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0959 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 1.5e-156 556.2 291 100.0
Manes.13G059900 Manihot esculenta HOM05D005155 ORTHO05D006266 5.9e-65 251.9 292 51.4
Actinidia20603 Actinidia chinensis HOM05D005155 ORTHO05D006266 3.6e-62 242.7 283 50.9
Actinidia20617 Actinidia chinensis HOM05D005155 ORTHO05D006266 4.7e-62 242.3 283 50.9
Potri.014G170500 Populus trichocarpa HOM05D005155 ORTHO05D006266 5.2e-61 238.8 299 49.5
MELO3C024180.2 Cucumis melo HOM05D005155 ORTHO05D006266 1.2e-60 237.7 294 50.7
CSS0035525 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 1.5e-60 237.3 290 52.1
Glyma.19G235800 Glycine max HOM05D005155 ORTHO05D006266 3.4e-60 236.1 303 48.8
Dinv21322 Davidia involucrata HOM05D005155 ORTHO05D006266 4.4e-60 235.7 291 51.5
CsaV3_7G002370 Cucumis sativus L. HOM05D005155 ORTHO05D006266 9.8e-60 234.6 289 51.6
THA.LOC104802634 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 1.3e-59 234.2 292 49.0
Nitab4.5_0003086g0050 Nicotiana tabacum HOM05D005155 ORTHO05D006266 2.9e-59 233.0 298 49.0
Glyma.03G238300 Glycine max HOM05D005155 ORTHO05D006266 3.7e-59 232.6 304 48.7
Nitab4.5_0004941g0060 Nicotiana tabacum HOM05D005155 ORTHO05D006266 4.9e-59 232.3 304 48.0
MBI04_g26115_MAGBIO Magnolia biondii HOM05D005155 ORTHO05D006266 8.3e-59 231.5 312 48.7
Rhsim04G0007200 Rhododendron simsii HOM05D005155 ORTHO05D006266 1.4e-58 230.7 309 49.2
TPR.G3861 Trifolium pratense HOM05D005155 ORTHO05D006266 4.1e-58 229.2 312 48.7
ClCG02G003040 Citrullus lanatus HOM05D005155 ORTHO05D006266 5.4e-58 228.8 292 51.4
Dinv05324 Davidia involucrata HOM05D005155 ORTHO05D006266 9.2e-58 228.0 302 48.7
Lj4g0024217 Lotus japonicus HOM05D005155 ORTHO05D006266 1.6e-57 227.3 321 47.4
Prupe.3G194600 Prunus persica HOM05D005155 ORTHO05D006266 2.0e-57 226.9 286 51.7
CDE11G1110 Ceratophyllum demersum HOM05D005155 ORTHO05D006266 2.7e-57 226.5 216 65.7
Actinidia24711 Actinidia chinensis HOM05D005155 ORTHO05D006266 7.8e-57 224.9 261 51.0
Sed0007088 Sechium edule HOM05D005155 ORTHO05D006266 2.3e-56 223.4 293 49.8
Haze_24928 Corylus avellana HOM05D005155 ORTHO05D006266 3.9e-56 222.6 305 48.5
Oeu022053.1 Olea europaea HOM05D005155 ORTHO05D006266 5.0e-56 222.2 298 49.0
Ah.08g210400 Amaranthus hybridus HOM05D005155 ORTHO05D006266 8.6e-56 221.5 277 50.2
CiPaw.04G197900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.1e-55 221.1 299 49.2
Lalb_Chr21g0315451 Lupinus albus HOM05D005155 ORTHO05D006266 1.5e-55 220.7 296 47.6
Phvul.006G092400 Phaseolus vulgaris HOM05D005155 ORTHO05D006266 1.5e-55 220.7 310 48.1
Gohir.D11G154600 Gossypium hirsutum HOM05D005155 ORTHO05D006266 1.9e-55 220.3 281 49.1
PGR044G0745 Punica granatum HOM05D005155 ORTHO05D006266 2.5e-55 219.9 289 50.5
Ciclev10015959m.g Citrus clementina HOM05D005155 ORTHO05D006266 3.3e-55 219.5 303 48.8
GSVIVG01030126001 Vitis vinifera HOM05D005155 ORTHO05D006266 3.3e-55 219.5 264 51.9
Gorai.007G164700 Gossypium raimondii HOM05D005155 ORTHO05D006266 4.3e-55 219.2 281 48.8
Hma1.2p1_0629F.1_g192150 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 4.3e-55 219.2 303 48.5
TWI75G0909 Tripterygium wilfordii HOM05D005155 ORTHO05D006266 1.6e-54 217.2 289 47.4
Atru.chr6.3431 Acer truncatum HOM05D005155 ORTHO05D006266 2.1e-54 216.9 283 51.9
VMungo0540G1824 Vigna mungo HOM05D005155 ORTHO05D006266 2.8e-54 216.5 312 46.5
Cpa.g.sc136.55 Carica papaya HOM05D005155 ORTHO05D006266 3.6e-54 216.1 299 48.5
Gorai.001G190100 Gossypium raimondii HOM05D005155 ORTHO05D006266 8.0e-54 214.9 280 49.3
Sc20g0004590 Simmondsia chinensis HOM05D005155 ORTHO05D006266 8.0e-54 214.9 314 47.5
Psat7g043480 Pisum sativum HOM05D005155 ORTHO05D006266 1.1e-53 214.5 305 47.2
Eucgr.K01388 Eucalyptus grandis HOM05D005155 ORTHO05D006266 1.4e-53 214.2 289 49.1
Gohir.D07G170200 Gossypium hirsutum HOM05D005155 ORTHO05D006266 3.1e-53 213.0 280 49.3
TPR.G35685 Trifolium pratense HOM05D005155 ORTHO05D006266 3.1e-53 213.0 301 44.9
HPP92_009941 Vanilla planifolia HOM05D005155 ORTHO05D006266 3.1e-53 213.0 287 47.4
Aqoxy3G04181 Aquilegia oxysepala HOM05D005155 ORTHO05D006266 1.5e-52 210.7 297 47.8
CSS0023894 Camellia sinensis var. sinensis HOM05D005155 ORTHO05D006266 2.6e-52 209.9 293 49.1
Solyc05g005730.4 Solanum lycopersicum HOM05D005155 ORTHO05D006266 4.4e-52 209.1 329 44.7
Sopen05g001730 Solanum pennellii HOM05D005155 ORTHO05D006266 4.4e-52 209.1 321 44.2
PGSC0003DMG400004112 Solanum tuberosum HOM05D005155 ORTHO05D006266 4.4e-52 209.1 320 42.5
Gohir.A07G163100 Gossypium hirsutum HOM05D005155 ORTHO05D006266 5.8e-52 208.8 253 50.6
Sp2g18610 Schrenkiella parvula HOM05D005155 ORTHO05D006266 5.8e-52 208.8 281 47.7
Duzib211G0098 Durio zibethinus HOM05D005155 ORTHO05D006266 1.7e-51 207.2 285 47.0
MD09G1131700 Malus domestica HOM05D005155 ORTHO05D006266 1.7e-51 207.2 298 46.6
Cfa014201 Carpinus fangiana HOM05D005155 ORTHO05D006266 3.7e-51 206.1 309 46.3
Thhalv10004636m.g Eutrema salsugineum HOM05D005155 ORTHO05D006266 6.4e-51 205.3 284 47.2
Aa31LG4G7530 Aethionema arabicum HOM05D005155 ORTHO05D006266 1.1e-50 204.5 282 47.9
A09p04360 Brassica napus HOM05D005155 ORTHO05D006266 1.4e-50 204.1 292 46.2
AUR62030994 Chenopodium quinoa HOM05D005155 ORTHO05D006266 1.9e-50 203.8 254 50.4
AL8G20970 Arabidopsis lyrata HOM05D005155 ORTHO05D006266 3.2e-50 203.0 288 46.9
Ah.08g219720 Amaranthus hybridus HOM05D005155 ORTHO05D006266 4.1e-50 202.6 279 47.3
Cc02_g33980 Coffea canephora HOM05D005155 ORTHO05D006266 4.1e-50 202.6 260 49.6
Haze_12586 Corylus avellana HOM05D005155 ORTHO05D006266 5.4e-50 202.2 203 57.1
Thecc.01G199500 Theobroma cacao HOM05D005155 ORTHO05D006266 5.4e-50 202.2 284 47.5
TAR629G2368 Trochodendron aralioides HOM05D005155 ORTHO05D006266 9.2e-50 201.4 323 45.5
CAN.G1447.4 Capsicum annuum HOM05D005155 ORTHO05D006266 1.2e-49 201.1 316 41.8
AT5G48240 Arabidopsis thaliana HOM05D005155 ORTHO05D006266 1.6e-49 200.7 286 46.5
Duzib138G0133 Durio zibethinus HOM05D005155 ORTHO05D006266 1.6e-49 200.7 253 48.6
C09p04670 Brassica napus HOM05D005155 ORTHO05D006266 2.1e-49 200.3 289 46.7
THA.LOC104819027 Tarenaya hassleriana HOM05D005155 ORTHO05D006266 2.7e-49 199.9 281 45.9
ATR0225G032 Amborella trichopoda HOM05D005155 ORTHO05D006266 6.0e-49 198.7 291 47.1
DCAR_021083 Daucus carota HOM05D005155 ORTHO05D006266 7.8e-49 198.4 318 43.4
Carub.0008s0781 Capsella rubella HOM05D005155 ORTHO05D006266 1.0e-48 198.0 286 46.5
PSO210G0096 Papaver somniferum HOM05D005155 ORTHO05D006266 1.0e-48 198.0 274 44.9
PSO782G4695 Papaver somniferum HOM05D005155 ORTHO05D006266 1.0e-48 198.0 268 44.0
CAN.G715.5 Capsicum annuum HOM05D005155 ORTHO05D006266 1.3e-48 197.6 283 44.2
Peaxi162Scf00359g00214 Petunia axillaris HOM05D005155 ORTHO05D006266 1.7e-48 197.2 297 44.1
arahy.Tifrunner.gnm1.ann1.ZBS9GV Arachis hypogaea HOM05D005155 ORTHO05D006266 2.3e-48 196.8 299 46.2
arahy.Tifrunner.gnm1.ann1.FV1RU3 Arachis hypogaea HOM05D005155 ORTHO05D006266 5.1e-48 195.7 299 46.2
C07p38970 Brassica napus HOM05D005155 ORTHO05D006266 6.6e-48 195.3 299 44.5
unitig_26.g9470 Utricularia gibba HOM05D003767 ORTHO05D004507 1.9e-47 193.7 260 47.7
A06p39310 Brassica napus HOM05D005155 ORTHO05D006266 2.5e-47 193.4 219 51.6
EL10Ac5g10791 Beta vulgaris HOM05D005155 ORTHO05D006266 3.3e-47 193.0 287 45.6
CANSAT64G2107 Cannabis sativa HOM05D005155 ORTHO05D006266 5.6e-47 192.2 272 48.2
BraA09t36073Z Brassica rapa HOM05D005155 ORTHO05D006266 9.5e-47 191.4 317 42.3
BolC9t53395H Brassica oleracea HOM05D005155 ORTHO05D006266 1.6e-46 190.7 312 42.3
CARHR286520 Cardamine hirsuta HOM05D005155 ORTHO05D006266 6.2e-46 188.7 302 44.7
FAN09G4460 Fragaria x ananassa HOM05D005155 ORTHO05D006266 6.2e-46 188.7 299 44.1
CARHR218550 Cardamine hirsuta HOM05D005155 ORTHO05D006266 1.4e-45 187.6 266 47.7
Ca_02017_v3 Cicer arietinum L. HOM05D005155 ORTHO05D006266 1.4e-45 187.6 297 43.1
BcaB04g19566 Brassica carinata HOM05D005155 ORTHO05D006266 1.2e-44 184.5 292 43.8
FAN02G4414 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.6e-44 183.3 298 43.6
SGA_v2.0_scaffold181G39700 Striga asiatica HOM05D005155 ORTHO05D006266 4.4e-44 182.6 364 41.2
BcaC04g23785 Brassica carinata HOM05D005155 ORTHO05D006266 5.8e-44 182.2 291 44.0
RcHm_v2.0_Chr2g0155591 Rosa chinensis HOM05D005155 ORTHO05D006266 7.5e-44 181.8 297 42.8
BraA06t26845Z Brassica rapa HOM05D005155 ORTHO05D006266 9.9e-44 181.4 249 46.6
Migut.M00065 Erythranthe guttata HOM05D005155 ORTHO05D006266 1.3e-43 181.0 320 42.2
HanXRQChr01g0006811 Helianthus annuus HOM05D005155 ORTHO05D006266 2.9e-43 179.9 316 41.5
Lsat_1_v5_gn_0_13881 Lactuca sativa HOM05D005155 ORTHO05D006266 1.1e-42 177.9 265 46.0
SalBow7G0407 Salvia bowleyana HOM05D005155 ORTHO05D006266 1.9e-42 177.2 283 43.1
Nn3g19477 Nelumbo nucifera HOM05D005155 ORTHO05D006266 7.1e-42 175.3 298 40.9
FAN05G3842 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.1e-41 173.7 297 41.4
FvH4_6g40390 Fragaria vesca HOM05D005155 ORTHO05D006266 3.5e-41 172.9 297 41.4
Psat5g216800 Pisum sativum HOM05D005155 ORTHO05D006266 4.6e-41 172.6 240 46.2
COL.COLO4_19654 Corchorus olitorius HOM05D005155 ORTHO05D006266 6.0e-41 172.2 153 60.1
SEGI_31719 Sequoiadendron giganteum HOM05D005155 ORTHO05D006266 1.7e-40 170.6 200 52.0
MSTRG.6620 Avicennia marina HOM05D005155 ORTHO05D006266 2.3e-40 170.2 226 51.8
Gohir.A11G147700 Gossypium hirsutum HOM05D005155 ORTHO05D006266 2.5e-39 166.8 247 45.3
BcaC06g30816 Brassica carinata HOM05D005155 ORTHO05D006266 5.6e-39 165.6 284 42.3
MD17G1119200 Malus domestica HOM05D005155 ORTHO05D006266 8.1e-38 161.8 229 48.5
Zm00001eb298370 Zea mays HOM05D005155 ORTHO05D006266 3.1e-37 159.8 181 50.8
Os11g0266000 Oryza sativa ssp. japonica HOM05D005155 ORTHO05D006266 2.0e-36 157.1 250 40.8
ECA248G0062 Erigeron canadensis HOM05D005155 ORTHO05D006266 7.6e-36 155.2 344 36.0
FAN14G3535 Fragaria x ananassa HOM05D005155 ORTHO05D006266 2.9e-35 153.3 320 37.5
BolC7t44418H Brassica oleracea HOM05D005155 ORTHO05D006266 5.4e-34 149.1 177 54.2
Nn1g02050 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.0e-32 144.8 303 39.6
QL04p067008 Quercus lobata HOM05D005155 ORTHO05D006266 6.6e-32 142.1 249 43.0
Cc00_g18660 Coffea canephora HOM05D005155 ORTHO05D006266 6.2e-30 135.6 124 62.9
PSO782G5585 Papaver somniferum HOM05D005155 ORTHO05D006266 1.1e-29 134.8 237 41.4
CiPaw.03G283900 Carya illinoinensis HOM05D005155 ORTHO05D006266 1.4e-29 134.4 270 39.3
Lj1A800T38 Lonicera japonica HOM05D005155 ORTHO05D006266 1.4e-29 134.4 295 38.3
Cc00_g14350 Coffea canephora HOM05D005155 ORTHO05D006266 4.0e-29 132.9 114 64.9
PSO782G0752 Papaver somniferum HOM05D005155 ORTHO05D006266 4.2e-26 122.9 196 41.8
Cc07_g20190 Coffea canephora HOM05D005155 ORTHO05D006266 3.5e-25 119.8 111 61.3
AUR62008242 Chenopodium quinoa HOM05D005155 ORTHO05D006266 4.6e-25 119.4 108 58.3
AagrBONN_evm.TU.Sc2ySwM_368.2873 Anthoceros agrestis HOM05D005155 ORTHO05D006266 4.8e-22 109.4 222 36.9
Nn1g02049 Nelumbo nucifera HOM05D005155 ORTHO05D006266 1.5e-20 104.4 185 43.8
Mapoly0148s0006 Marchantia polymorpha HOM05D005155 ORTHO05D006266 2.2e-19 100.5 198 37.4
Pp3c22_320 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.8e-19 99.8 179 38.0
Pp3c22_322 Physcomitrium patens HOM05D005155 ORTHO05D006266 3.8e-19 99.8 179 38.0
CBR_g23113 Chara braunii HOM05D005155 ORTHO05D006266 2.7e-17 93.6 195 38.5
Hma1.2p1_1388F.1_g279940 Hydrangea macrophylla HOM05D005155 ORTHO05D006266 1.6e-14 84.3 68 63.2
QL01p014609 Quercus lobata HOM05D005155 ORTHO05D006266 3.7e-14 83.2 97 52.6
Cc07_g20180 Coffea canephora HOM05D005155 ORTHO05D006266 6.5e-11 72.4 88 47.7
PRCOL_00000835 Prasinoderma coloniale HOM05D005155 ORTHO05D006266 3.0e-08 63.5 152 34.2


User provided reference genes

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