Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0878 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 1.5e-49 199.9 158 100.0
CDE02G0064 Ceratophyllum demersum HOM05D007476 ORTHO05D006998 8.0e-40 167.5 148 94.6
TAR375G0914 Trochodendron aralioides HOM05D000137 ORTHO05D000382 6.6e-10 68.2 92 60.9
Gorai.006G177500 Gossypium raimondii HOM05D007476 ORTHO05D006998 1.9e-09 66.6 47 70.2
Gohir.A09G160400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 5.6e-09 65.1 46 71.7
Thecc.05G050900 Theobroma cacao HOM05D007476 ORTHO05D006998 7.3e-09 64.7 95 60.0
Gohir.D04G116600 Gossypium hirsutum HOM05D007476 ORTHO05D006998 9.5e-09 64.3 47 70.2
Gorai.009G421500 Gossypium raimondii HOM05D007476 ORTHO05D006998 9.5e-09 64.3 47 70.2
THA.LOC104823246 Tarenaya hassleriana HOM05D010138 ORTHO05D006998 9.5e-09 64.3 66 69.7
HanXRQChr07g0195971 Helianthus annuus HOM05D007476 ORTHO05D006998 1.2e-08 63.9 49 69.4
Duzib093G1301 Durio zibethinus HOM05D007476 ORTHO05D006998 1.6e-08 63.5 79 68.4
ECA238G2167 Erigeron canadensis HOM05D007476 ORTHO05D006998 2.8e-08 62.8 55 60.0
Nn2g12939 Nelumbo nucifera HOM05D007476 ORTHO05D006998 3.6e-08 62.4 98 58.2
Dinv35685 Davidia involucrata HOM05D007476 ORTHO05D006998 6.2e-08 61.6 46 69.6
Dinv37238 Davidia involucrata HOM05D007476 ORTHO05D006998 6.2e-08 61.6 46 69.6
Gohir.A04G077400 Gossypium hirsutum HOM05D007476 ORTHO05D006998 6.2e-08 61.6 47 68.1
AL6G12020 Arabidopsis lyrata HOM05D010138 ORTHO05D006998 1.4e-07 60.5 46 65.2
AT5G02770 Arabidopsis thaliana HOM05D010138 ORTHO05D006998 1.4e-07 60.5 46 65.2
Nitab4.5_0000754g0030 Nicotiana tabacum HOM05D007476 ORTHO05D006998 1.4e-07 60.5 46 65.2
Cc06_g03350 Coffea canephora HOM05D007476 ORTHO05D006998 2.3e-07 59.7 47 66.0
HanXRQChr14g0453431 Helianthus annuus HOM05D007476 ORTHO05D006998 2.3e-07 59.7 47 66.0
Sc20g0004220 Simmondsia chinensis HOM05D007476 ORTHO05D006998 4.0e-07 58.9 40 72.5
Carub.0006s0153 Capsella rubella HOM05D010138 ORTHO05D006998 5.2e-07 58.5 66 48.5
BolC7t43445H Brassica oleracea HOM05D001366 ORTHO05D008529 6.8e-07 58.2 53 60.4
TWI53G1272 Tripterygium wilfordii HOM05D007476 ORTHO05D006998 6.8e-07 58.2 57 57.9
EL10Ac7g17261 Beta vulgaris HOM05D007476 ORTHO05D006998 8.9e-07 57.8 56 53.6
vmacro20080 Vaccinium macrocarpon HOM05D007476 ORTHO05D006998 8.9e-07 57.8 68 52.9
Actinidia05282 Actinidia chinensis HOM05D007476 ORTHO05D006998 1.2e-06 57.4 47 63.8
Thhalv10014656m.g Eutrema salsugineum HOM05D010138 ORTHO05D006998 1.2e-06 57.4 53 58.5
Oeu060068.2 Olea europaea HOM05D007476 ORTHO05D025237 1.5e-06 57.0 44 63.6
Eucgr.A01204 Eucalyptus grandis HOM05D007476 ORTHO05D006998 2.0e-06 56.6 42 66.7
FAN05G2812 Fragaria x ananassa HOM05D007476 ORTHO05D006998 2.0e-06 56.6 44 68.2
DCAR_020869 Daucus carota HOM05D007476 ORTHO05D006998 3.4e-06 55.8 45 64.4
Peaxi162Scf00597g00826 Petunia axillaris HOM05D007476 ORTHO05D006998 3.4e-06 55.8 89 53.9
BcaC06g34403 Brassica carinata HOM05D001366 ORTHO05D003220 4.4e-06 55.5 59 55.9
PGSC0003DMG400002015 Solanum tuberosum HOM05D007476 ORTHO05D006998 4.4e-06 55.5 71 63.4
CARHR210610 Cardamine hirsuta HOM05D010138 ORTHO05D006998 5.8e-06 55.1 76 47.4
Ah.08g212030 Amaranthus hybridus HOM05D007476 ORTHO05D006998 9.9e-06 54.3 59 49.2
CiPaw.10G138800 Carya illinoinensis HOM05D007476 ORTHO05D006998 9.9e-06 54.3 36 69.4


User provided reference genes

Program Settings