Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0858 Ceratophyllum demersum HOM05D005360 ORTHO05D006501 1.4e-153 546.2 274 100.0
TAR633G1180 Trochodendron aralioides HOM05D005360 ORTHO05D006501 1.1e-92 344.0 272 62.9
Nn6g35157 Nelumbo nucifera HOM05D005360 ORTHO05D006501 2.3e-90 336.3 263 65.4
Hma1.2p1_0051F.1_g029700 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 1.4e-87 327.0 267 63.7
MBI01_g19099_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 1.4e-87 327.0 280 62.9
Rhsim13G0102900 Rhododendron simsii HOM05D005360 ORTHO05D006501 3.0e-87 325.9 269 63.6
Dinv29396 Davidia involucrata HOM05D005360 ORTHO05D006501 1.5e-86 323.6 242 66.5
CSS0014580 Camellia sinensis var. sinensis HOM05D005360 ORTHO05D006501 2.0e-86 323.2 238 66.8
Thecc.09G295200 Theobroma cacao HOM05D005360 ORTHO05D006501 2.0e-86 323.2 271 59.8
vmacro03239 Vaccinium macrocarpon HOM05D005360 ORTHO05D006501 1.3e-85 320.5 249 65.1
GSVIVG01031434001 Vitis vinifera HOM05D005360 ORTHO05D006501 1.3e-85 320.5 234 67.1
Ciclev10029076m.g Citrus clementina HOM05D005360 ORTHO05D006501 2.9e-85 319.3 268 60.1
Nitab4.5_0000442g0050 Nicotiana tabacum HOM05D005360 ORTHO05D006501 4.1e-84 315.5 267 59.2
ATR0665G582 Amborella trichopoda HOM05D005360 ORTHO05D006501 1.2e-83 313.9 236 63.1
QL01p014311 Quercus lobata HOM05D005360 ORTHO05D006501 1.2e-83 313.9 235 66.0
Aqoxy1G01027 Aquilegia oxysepala HOM05D005360 ORTHO05D006501 2.0e-83 313.2 242 62.8
Lj1A216T24 Lonicera japonica HOM05D005360 ORTHO05D006501 2.0e-83 313.2 271 60.5
Manes.11G154700 Manihot esculenta HOM05D005360 ORTHO05D006501 2.0e-83 313.2 235 66.8
TWI31G0773 Tripterygium wilfordii HOM05D005360 ORTHO05D006501 2.7e-83 312.8 274 59.9
Actinidia24162 Actinidia chinensis HOM05D005360 ORTHO05D006501 6.6e-82 308.1 253 61.7
Hund07728 Selenicereus undatus HOM05D005360 ORTHO05D006501 1.1e-81 307.4 237 63.3
CiPaw.14G105400 Carya illinoinensis HOM05D005360 ORTHO05D006501 3.3e-81 305.8 235 62.6
MBI01_g31369_MAGBIO Magnolia biondii HOM05D005360 ORTHO05D006501 4.3e-81 305.4 280 60.7
HanXRQChr13g0403531 Helianthus annuus HOM05D005360 ORTHO05D006501 9.5e-81 304.3 265 57.4
Potri.009G002000 Populus trichocarpa HOM05D005360 ORTHO05D006501 1.2e-80 303.9 234 64.5
RcHm_v2.0_Chr5g0056101 Rosa chinensis HOM05D005360 ORTHO05D006501 1.6e-80 303.5 275 56.7
CAN.G546.64 Capsicum annuum HOM05D005360 ORTHO05D006501 2.1e-80 303.1 265 57.7
Cc04_g14880 Coffea canephora HOM05D005360 ORTHO05D006501 2.1e-80 303.1 235 63.0
Ah.01g016120 Amaranthus hybridus HOM05D005360 ORTHO05D006501 3.6e-80 302.4 242 62.4
Eucgr.B03910 Eucalyptus grandis HOM05D005360 ORTHO05D006501 4.7e-80 302.0 274 56.6
Atru.chr3.3432 Acer truncatum HOM05D005360 ORTHO05D006501 6.2e-80 301.6 234 64.5
Haze_23502 Corylus avellana HOM05D005360 ORTHO05D006501 6.2e-80 301.6 243 62.6
PSO339G5504 Papaver somniferum HOM05D005360 ORTHO05D006501 6.2e-80 301.6 237 62.0
MD11G1152100 Malus domestica HOM05D005360 ORTHO05D006501 1.4e-79 300.4 275 56.4
PSO063G2369 Papaver somniferum HOM05D005360 ORTHO05D006501 1.4e-79 300.4 237 62.0
SGA_v2.0_scaffold193G40720 Striga asiatica HOM05D005360 ORTHO05D006501 1.4e-79 300.4 240 62.1
MSTRG.21078 Avicennia marina HOM05D005360 ORTHO05D006501 3.1e-79 299.3 242 61.2
Sc21g0004290 Simmondsia chinensis HOM05D005360 ORTHO05D006501 4.0e-79 298.9 269 57.2
Sabra09G0000500 Salix brachista HOM05D005360 ORTHO05D006501 1.5e-78 297.0 234 62.8
FvH4_3g30230 Fragaria vesca HOM05D005360 ORTHO05D006501 2.0e-78 296.6 245 58.4
Gorai.001G118400 Gossypium raimondii HOM05D005360 ORTHO05D006501 1.3e-77 293.9 270 55.2
Ca_01695_v3 Cicer arietinum L. HOM05D005360 ORTHO05D006501 2.2e-77 293.1 231 60.6
AT1G08220 Arabidopsis thaliana HOM05D005360 ORTHO05D006501 2.9e-77 292.7 247 57.9
PGSC0003DMG400000427 Solanum tuberosum HOM05D005360 ORTHO05D006501 2.9e-77 292.7 262 56.9
CANSAT64G2904 Cannabis sativa HOM05D005360 ORTHO05D006501 3.7e-77 292.4 271 53.5
Gohir.D07G110200 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.7e-77 292.4 270 54.8
Glyma.13G219600 Glycine max HOM05D005360 ORTHO05D006501 4.9e-77 292.0 233 59.7
CANSAT64G2995 Cannabis sativa HOM05D005360 ORTHO05D006501 6.4e-77 291.6 271 53.5
Sopen11g026340 Solanum pennellii HOM05D005360 ORTHO05D006501 1.1e-76 290.8 239 59.0
MD03G1130500 Malus domestica HOM05D005360 ORTHO05D006501 3.2e-76 289.3 276 55.1
THA.LOC104826399 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 4.1e-76 288.9 251 57.4
EL10Ac9g21036 Beta vulgaris HOM05D005360 ORTHO05D006501 7.0e-76 288.1 276 54.7
C08p50100 Brassica napus HOM05D005360 ORTHO05D006501 7.0e-76 288.1 265 55.1
BolC8t52540H Brassica oleracea HOM05D005360 ORTHO05D006501 7.0e-76 288.1 265 55.1
Solyc11g066610.2 Solanum lycopersicum HOM05D005360 ORTHO05D006501 1.6e-75 287.0 239 58.2
TPR.G32397 Trifolium pratense HOM05D005360 ORTHO05D006501 2.0e-75 286.6 231 60.2
DCAR_015495 Daucus carota HOM05D005360 ORTHO05D006501 2.7e-75 286.2 237 59.1
Migut.D02306 Erythranthe guttata HOM05D005360 ORTHO05D006501 4.6e-75 285.4 236 59.3
C08p03560 Brassica napus HOM05D005360 ORTHO05D006501 6.0e-75 285.0 250 55.6
Carub.0001s0758 Capsella rubella HOM05D005360 ORTHO05D006501 1.3e-74 283.9 247 55.9
Sp1g06870 Schrenkiella parvula HOM05D005360 ORTHO05D006501 1.3e-74 283.9 247 56.7
BolC8t47160H Brassica oleracea HOM05D005360 ORTHO05D006501 1.7e-74 283.5 250 55.6
A08p35270 Brassica napus HOM05D005360 ORTHO05D006501 5.0e-74 282.0 247 55.9
CARHR008050 Cardamine hirsuta HOM05D005360 ORTHO05D006501 5.0e-74 282.0 244 54.5
BraA08t35436Z Brassica rapa HOM05D005360 ORTHO05D006501 8.6e-74 281.2 247 55.9
Lj3g0014716 Lotus japonicus HOM05D005360 ORTHO05D006501 8.6e-74 281.2 273 54.2
AL1G18630 Arabidopsis lyrata HOM05D005360 ORTHO05D006501 1.1e-73 280.8 247 55.9
BcaC07g42518 Brassica carinata HOM05D005360 ORTHO05D006501 1.1e-73 280.8 249 57.0
Lalb_Chr24g0395031 Lupinus albus HOM05D005360 ORTHO05D006501 3.3e-73 279.3 252 53.6
Phvul.006G166300 Phaseolus vulgaris HOM05D005360 ORTHO05D006501 3.3e-73 279.3 233 58.4
Thhalv10008429m.g Eutrema salsugineum HOM05D005360 ORTHO05D006501 1.2e-72 277.3 247 54.7
Lsat_1_v5_gn_6_42160 Lactuca sativa HOM05D005360 ORTHO05D006501 1.4e-71 273.9 265 53.6
Psat5g252440 Pisum sativum HOM05D005360 ORTHO05D006501 1.8e-71 273.5 230 57.0
THA.LOC104800565 Tarenaya hassleriana HOM05D005360 ORTHO05D006501 1.8e-71 273.5 252 56.0
PGR102G1574 Punica granatum HOM05D005360 ORTHO05D006501 3.1e-71 272.7 264 54.5
Aa31LG1G18020 Aethionema arabicum HOM05D005360 ORTHO05D006501 9.9e-70 267.7 236 55.9
FAN11G3336 Fragaria x ananassa HOM05D005360 ORTHO05D006501 1.7e-69 266.9 245 54.3
FAN21G0874 Fragaria x ananassa HOM05D005360 ORTHO05D006501 1.7e-69 266.9 245 54.3
Medtr2g084545 Medicago truncatula HOM05D005360 ORTHO05D006501 1.7e-69 266.9 225 55.1
Sed0004275 Sechium edule HOM05D005360 ORTHO05D006501 2.9e-69 266.2 207 62.3
Gohir.A07G106300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.2e-68 262.7 209 60.8
AUR62031793 Chenopodium quinoa HOM05D005360 ORTHO05D006501 1.6e-67 260.4 250 55.2
TAR633G1639 Trochodendron aralioides HOM05D005360 ORTHO05D006501 7.8e-67 258.1 223 57.4
CsaV3_6G014530 Cucumis sativus L. HOM05D005360 ORTHO05D006501 8.6e-66 254.6 206 62.1
Peaxi162Scf00150g00315 Petunia axillaris HOM05D005360 ORTHO05D006501 2.5e-65 253.1 226 57.1
MELO3C021472.2 Cucumis melo HOM05D005360 ORTHO05D006501 1.6e-64 250.4 206 62.1
Os05g0176500 Oryza sativa ssp. japonica HOM05D005360 ORTHO05D006501 8.1e-64 248.1 246 52.0
BcaB03g13345 Brassica carinata HOM05D005360 ORTHO05D006501 1.1e-63 247.7 267 48.7
Zm00001eb345720 Zea mays HOM05D005360 ORTHO05D006501 1.4e-63 247.3 232 53.9
COL.COLO4_19249 Corchorus olitorius HOM05D000737 ORTHO05D000581 2.4e-63 246.5 262 48.9
Duzib168G1167 Durio zibethinus HOM05D005360 ORTHO05D006501 4.0e-63 245.7 270 49.6
HPP92_015033 Vanilla planifolia HOM05D005360 ORTHO05D006501 4.4e-62 242.3 274 47.4
arahy.Tifrunner.gnm1.ann1.9X9VA5 Arachis hypogaea HOM05D005360 ORTHO05D006501 1.3e-61 240.7 221 53.8
unitig_899.g14961 Utricularia gibba HOM05D005360 ORTHO05D006501 2.2e-61 240.0 247 50.6
SalBow6G0303 Salvia bowleyana HOM05D005360 ORTHO05D006501 7.1e-60 235.0 255 47.1
arahy.Tifrunner.gnm1.ann1.E5WW1G Arachis hypogaea HOM05D005360 ORTHO05D004899 5.6e-57 225.3 195 55.9
SHI06160 Sapria himalayana HOM05D005360 ORTHO05D006501 7.3e-57 224.9 221 50.7
HPP92_015112 Vanilla planifolia HOM05D005360 ORTHO05D006501 1.4e-55 220.7 272 44.9
Gohir.A07G000166 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.4e-54 216.1 187 57.2
Gohir.1Z049633 Gossypium hirsutum HOM05D005360 ORTHO05D006501 3.2e-52 209.5 183 56.3
Gohir.A05G054800 Gossypium hirsutum HOM05D005360 ORTHO05D006501 4.9e-45 185.7 231 45.0
Prupe.6G115300 Prunus persica HOM05D005360 ORTHO05D006501 8.4e-45 184.9 161 57.1
Hma1.2p1_0051F.1_g029710 Hydrangea macrophylla HOM05D005360 ORTHO05D006501 2.5e-41 173.3 125 66.4
Gohir.A02G097303 Gossypium hirsutum HOM05D005360 ORTHO05D006501 4.3e-41 172.6 221 47.1
VMungo0540G0253 Vigna mungo HOM05D005360 ORTHO05D006501 4.5e-38 162.5 137 58.4
SMO116G0134 Selaginella moellendorffii HOM05D005360 ORTHO05D006501 3.8e-37 159.5 223 39.5
Oeu026987.1 Olea europaea HOM05D005360 ORTHO05D006501 5.5e-36 155.6 123 61.0
Gohir.A10G063101 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.5e-33 147.5 171 46.2
Cpa.g.sc2403.1 Carica papaya HOM05D005360 ORTHO05D006501 5.3e-31 139.0 144 52.8
Gohir.A09G043650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 4.9e-29 132.5 123 55.3
Gohir.A11G191650 Gossypium hirsutum HOM05D005360 ORTHO05D006501 6.0e-27 125.6 250 37.2
CiPaw.13G142900 Carya illinoinensis HOM05D005360 ORTHO05D006501 1.6e-24 117.5 116 47.4
Gohir.A06G034300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 5.0e-21 105.9 104 51.0
CiPaw.13G143100 Carya illinoinensis HOM05D005360 ORTHO05D006501 8.5e-21 105.1 118 44.9
AUR62023988 Chenopodium quinoa HOM05D005360 ORTHO05D006501 2.7e-19 100.1 87 56.3
FAN09G1017 Fragaria x ananassa HOM05D005360 ORTHO05D006501 2.7e-19 100.1 81 59.3
Gohir.A06G100002 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.4e-18 97.8 72 63.9
FAN09G0332 Fragaria x ananassa HOM05D005360 ORTHO05D006501 1.5e-17 94.4 75 60.0
Gohir.A05G334300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 5.7e-17 92.4 117 47.0
Zm00001eb137350 Zea mays HOM05D005360 ORTHO05D006501 4.1e-15 86.3 83 47.0
SEGI_40723 Sequoiadendron giganteum HOM05D005360 ORTHO05D006501 5.3e-15 85.9 91 50.5
Gohir.A06G038884 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.5e-14 84.3 129 41.1
Gohir.A11G000150 Gossypium hirsutum HOM05D005360 ORTHO05D026494 4.5e-14 82.8 107 43.9
BcaC07g37801 Brassica carinata HOM05D005360 ORTHO05D006501 1.7e-13 80.9 99 44.4
Gohir.A06G133300 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.9e-12 77.4 100 42.0
Gohir.1Z049508 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.4e-10 71.2 89 43.8
Gohir.A02G089101 Gossypium hirsutum HOM05D005360 ORTHO05D006501 1.4e-10 71.2 82 46.3
FAN04G1623 Fragaria x ananassa HOM05D005360 ORTHO05D006501 6.7e-10 68.9 70 44.3
Actinidia07196 Actinidia chinensis HOM05D005360 ORTHO05D006501 2.4e-07 60.5 191 27.2
Eucgr.L03607 Eucalyptus grandis HOM05D005360 ORTHO05D006501 6.9e-07 58.9 55 43.6
Cfa022886 Carpinus fangiana HOM05D005360 ORTHO05D006501 4.5e-06 56.2 212 28.3


User provided reference genes

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