Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 7.3e-209 730.3 373 100.0
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 6.1e-147 524.6 367 75.5
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.1e-145 520.4 367 75.5
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 9.1e-143 510.8 327 77.4
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 3.8e-141 505.4 371 72.5
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 1.5e-140 503.4 371 69.5
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.2e-140 502.3 368 72.0
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 7.2e-140 501.1 369 71.5
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 9.4e-140 500.7 369 71.3
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 3.6e-139 498.8 368 71.5
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 6.1e-139 498.0 370 71.9
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 8.0e-139 497.7 325 79.1
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 8.0e-139 497.7 358 73.2
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 8.8e-138 494.2 344 73.8
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.2e-137 493.8 369 71.3
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.2e-137 493.8 369 71.3
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 5.7e-137 491.5 373 70.8
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 1.3e-136 490.3 369 70.2
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.3e-136 490.3 372 71.0
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.8e-136 489.2 367 71.9
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 6.3e-136 488.0 377 68.7
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 6.3e-136 488.0 372 69.6
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 4.1e-135 485.3 360 70.8
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 1.2e-134 483.8 327 74.6
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 1.6e-134 483.4 368 71.5
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 2.0e-134 483.0 327 75.8
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 3.5e-134 482.3 345 72.5
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 3.5e-134 482.3 378 68.5
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 4.5e-134 481.9 331 74.9
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 4.5e-134 481.9 360 71.9
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 7.7e-134 481.1 331 75.2
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 1.3e-133 480.3 335 75.2
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.7e-133 479.9 364 70.9
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 2.2e-133 479.6 350 74.3
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.2e-133 479.6 333 74.5
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 2.9e-133 479.2 322 77.3
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 2.9e-133 479.2 365 71.8
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 3.8e-133 478.8 330 74.2
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 3.8e-133 478.8 326 76.4
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 3.8e-133 478.8 369 69.6
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 5.0e-133 478.4 330 74.5
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 8.5e-133 477.6 364 70.9
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.1e-132 477.2 383 67.4
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 1.1e-132 477.2 325 76.6
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 1.9e-132 476.5 365 70.1
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 2.5e-132 476.1 373 68.4
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 3.2e-132 475.7 362 69.1
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 4.2e-132 475.3 370 68.9
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 5.5e-132 474.9 328 74.4
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 5.5e-132 474.9 326 74.8
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 7.2e-132 474.6 369 69.1
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 9.4e-132 474.2 331 73.4
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 9.4e-132 474.2 362 71.3
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 9.4e-132 474.2 367 70.3
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 9.4e-132 474.2 334 73.1
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 1.2e-131 473.8 336 73.2
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 1.2e-131 473.8 336 73.2
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 2.1e-131 473.0 367 68.9
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.7e-131 472.6 334 73.7
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 3.6e-131 472.2 378 66.9
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 4.7e-131 471.9 368 68.5
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 6.1e-131 471.5 328 74.4
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 8.0e-131 471.1 379 67.3
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 1.0e-130 470.7 328 74.4
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.4e-130 470.3 345 71.9
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 1.8e-130 469.9 327 74.3
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 1.8e-130 469.9 327 74.3
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 3.0e-130 469.2 330 73.6
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 6.8e-130 468.0 331 73.7
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 8.8e-130 467.6 323 74.6
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 1.5e-129 466.8 328 74.1
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 1.5e-129 466.8 322 75.2
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 1.5e-129 466.8 332 73.2
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 1.5e-129 466.8 369 67.8
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.6e-129 466.1 331 73.1
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 3.4e-129 465.7 407 62.7
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 4.4e-129 465.3 325 74.2
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 9.8e-129 464.2 329 72.3
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 1.7e-128 463.4 390 66.2
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 2.8e-128 462.6 325 74.2
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 1.1e-127 460.7 365 67.9
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 1.4e-127 460.3 333 70.3
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 4.1e-127 458.8 347 68.3
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 9.1e-127 457.6 332 70.5
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.7e-125 453.4 329 73.3
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 5.0e-125 451.8 378 64.3
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 8.6e-125 451.1 365 66.0
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 1.9e-124 449.9 367 66.5
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.5e-124 448.4 327 71.9
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.2e-123 447.2 376 64.9
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 1.8e-122 443.4 340 68.5
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 3.0e-122 442.6 337 70.0
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 6.8e-122 441.4 284 79.9
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 9.8e-121 437.6 330 70.9
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 1.7e-120 436.8 328 71.0
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 5.0e-117 425.2 276 79.3
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 8.6e-117 424.5 284 76.1
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.5e-116 423.7 335 68.4
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.6e-115 420.2 327 69.4
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 2.1e-115 419.9 288 75.3
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 2.8e-115 419.5 327 69.4
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 2.6e-113 412.9 323 68.7
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 1.2e-110 404.1 317 65.9
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.9e-108 396.7 286 68.9
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 5.8e-105 385.2 324 61.4
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 1.2e-102 377.5 233 82.8
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.5e-100 370.5 328 62.8
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 2.5e-100 369.8 291 63.2
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 5.1e-93 345.5 285 67.4
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 6.8e-90 335.1 302 59.6
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 1.5e-89 334.0 208 80.3
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 1.2e-81 307.8 289 56.4
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 6.4e-80 302.0 240 60.0
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.6e-78 295.8 229 70.3
TPR.G33976 Trifolium pratense HOM05D005463 ORTHO05D006900 1.4e-74 284.3 274 58.8
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 2.4e-74 283.5 259 54.1
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 2.1e-70 270.4 213 68.1
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 4.2e-63 246.1 186 66.7
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 1.6e-62 244.2 166 76.5
RcHm_v2.0_Chr4g0408791 Rosa chinensis HOM05D005463 ORTHO05D006900 1.9e-55 220.7 153 75.8
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 8.2e-51 205.3 176 60.2
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 5.9e-49 199.1 114 86.8
Oeu010361.1 Olea europaea HOM05D005463 ORTHO05D006900 3.2e-47 193.4 188 58.5
MSTRG.17019 Avicennia marina HOM05D005463 ORTHO05D006900 2.1e-46 190.7 148 68.9
arahy.Tifrunner.gnm1.ann1.UWT5DF Arachis hypogaea HOM05D005463 ORTHO05D006900 2.7e-46 190.3 107 88.8
Hma1.2p1_1089F.1_g255720 Hydrangea macrophylla HOM05D005463 ORTHO05D006900 2.7e-46 190.3 172 65.1
MSTRG.17060 Avicennia marina HOM05D005463 ORTHO05D006900 2.3e-45 187.2 148 68.2
RcHm_v2.0_Chr6g0260851 Rosa chinensis HOM05D005463 ORTHO05D006900 2.3e-45 187.2 133 75.2
SEGI_02284 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 6.7e-37 159.1 116 67.2
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 5.5e-31 139.4 305 33.1
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 2.0e-28 131.0 242 32.6
Nn3g19661 Nelumbo nucifera HOM05D005463 ORTHO05D006900 2.5e-23 114.0 188 43.6
Haze_27481 Corylus avellana HOM05D005463 ORTHO05D006900 2.7e-22 110.5 164 38.4
ATR0709G040 Amborella trichopoda HOM05D005463 ORTHO05D006900 4.4e-20 103.2 155 40.6
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 9.7e-20 102.1 241 29.5
RcHm_v2.0_Chr1g0375041 Rosa chinensis HOM05D005463 ORTHO05D006900 1.1e-18 98.6 50 94.0
MBI14_g30707_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.1e-18 96.7 70 68.6
CAN.G762.7 Capsicum annuum HOM05D005463 ORTHO05D006900 7.7e-17 92.4 58 81.0
CAN.G244.9 Capsicum annuum HOM05D005463 ORTHO05D006900 1.4e-13 81.6 84 52.4
RcHm_v2.0_Chr4g0408811 Rosa chinensis HOM05D005463 ORTHO05D006900 1.1e-10 72.0 117 41.9


User provided reference genes

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