Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0806 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 5.7e-98 360.9 182 100.0
CDE02G4674 Ceratophyllum demersum HOM05D005478 ORTHO05D006426 1.2e-84 316.6 182 89.0
QL02p074001 Quercus lobata HOM05D005478 ORTHO05D006426 1.4e-27 127.1 185 40.5
COL.COLO4_30424 Corchorus olitorius HOM05D005478 ORTHO05D006426 6.9e-27 124.8 192 37.5
Cpa.g.sc108.77 Carica papaya HOM05D005478 ORTHO05D006426 1.2e-26 124.0 187 40.1
Ciclev10016916m.g Citrus clementina HOM05D005478 ORTHO05D006426 2.9e-25 119.4 174 39.7
GSVIVG01032384001 Vitis vinifera HOM05D005478 ORTHO05D006426 3.8e-25 119.0 177 39.5
Prupe.3G293900 Prunus persica HOM05D005478 ORTHO05D006426 1.4e-24 117.1 192 34.9
TWI56G0849 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 5.4e-24 115.2 170 38.2
CiPaw.03G045600 Carya illinoinensis HOM05D005478 ORTHO05D006426 1.2e-23 114.0 185 40.0
Hma1.2p1_0818F.1_g223270 Hydrangea macrophylla HOM05D005478 ORTHO05D006426 1.2e-23 114.0 175 33.7
TPR.G31952 Trifolium pratense HOM05D005478 ORTHO05D006426 1.6e-23 113.6 176 36.4
VMungo0464G1533 Vigna mungo HOM05D005478 ORTHO05D006426 1.6e-23 113.6 175 33.7
Medtr6g004420 Medicago truncatula HOM05D005478 ORTHO05D006426 2.1e-23 113.2 175 36.0
THA.LOC104825319 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 2.1e-23 113.2 182 37.9
Duzib160G0719 Durio zibethinus HOM05D005478 ORTHO05D006426 2.7e-23 112.8 175 37.7
TAR371G0105 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.7e-23 112.8 183 37.2
TWI36G1604 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 3.5e-23 112.5 170 37.1
CiPaw.04G029700 Carya illinoinensis HOM05D005478 ORTHO05D006426 4.6e-23 112.1 175 39.4
Aa31LG2G5140 Aethionema arabicum HOM05D005478 ORTHO05D006426 7.8e-23 111.3 196 35.7
Duzib235G1061 Durio zibethinus HOM05D005478 ORTHO05D006426 2.3e-22 109.8 177 37.9
Glyma.05G002400 Glycine max HOM05D005478 ORTHO05D006426 2.3e-22 109.8 173 37.0
PGR142G0633 Punica granatum HOM05D005478 ORTHO05D006426 3.9e-22 109.0 191 30.9
MD09G1022900 Malus domestica HOM05D005478 ORTHO05D006426 5.1e-22 108.6 192 33.3
Sp2g16690 Schrenkiella parvula HOM05D005478 ORTHO05D006426 5.1e-22 108.6 181 35.9
ATR0824G160 Amborella trichopoda HOM05D005478 ORTHO05D006426 1.5e-21 107.1 169 35.5
Ca_04142_v3 Cicer arietinum L. HOM05D005478 ORTHO05D006426 1.5e-21 107.1 175 32.6
Thecc.06G091700 Theobroma cacao HOM05D005478 ORTHO05D006426 1.9e-21 106.7 187 34.2
ClCG10G013780 Citrullus lanatus HOM05D005478 ORTHO05D006426 2.5e-21 106.3 185 33.5
TAR629G3442 Trochodendron aralioides HOM05D005478 ORTHO05D006426 2.5e-21 106.3 176 34.1
Gorai.006G097900 Gossypium raimondii HOM05D005478 ORTHO05D006426 3.3e-21 105.9 180 33.3
Thhalv10027961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 1.3e-20 104.0 177 35.0
MD17G1022200 Malus domestica HOM05D005478 ORTHO05D006426 1.3e-20 104.0 191 30.9
Gohir.A09G082300 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.6e-20 103.6 178 33.7
Potri.001G343200 Populus trichocarpa HOM05D005478 ORTHO05D006426 1.6e-20 103.6 174 36.2
CsaV3_3G042880 Cucumis sativus L. HOM05D005478 ORTHO05D006426 2.1e-20 103.2 187 32.6
PGSC0003DMG400012636 Solanum tuberosum HOM05D005478 ORTHO05D006426 2.1e-20 103.2 175 34.3
Duzib192G0894 Durio zibethinus HOM05D005478 ORTHO05D006426 2.8e-20 102.8 176 35.8
Glyma.19G002600 Glycine max HOM05D005478 ORTHO05D006426 2.8e-20 102.8 170 35.3
Lsat_1_v5_gn_0_18280 Lactuca sativa HOM05D005478 ORTHO05D006426 2.8e-20 102.8 176 37.5
MSTRG.15534 Avicennia marina HOM05D005478 ORTHO05D006426 4.8e-20 102.1 169 35.5
Carub.0005s0595 Capsella rubella HOM05D005478 ORTHO05D006426 6.2e-20 101.7 185 33.5
Solyc02g093450.3 Solanum lycopersicum HOM05D005478 ORTHO05D006426 6.2e-20 101.7 175 33.1
TWI12G0237 Tripterygium wilfordii HOM05D005478 ORTHO05D006426 8.1e-20 101.3 185 35.7
Sopen02g038220 Solanum pennellii HOM05D005478 ORTHO05D006426 1.1e-19 100.9 175 33.1
Gohir.D09G082100 Gossypium hirsutum HOM05D005478 ORTHO05D006426 1.4e-19 100.5 175 33.1
Nn3g16686 Nelumbo nucifera HOM05D005478 ORTHO05D006426 1.4e-19 100.5 178 32.0
Cfa007338 Carpinus fangiana HOM05D005478 ORTHO05D006426 2.4e-19 99.8 184 35.9
Atru.chr6.2431 Acer truncatum HOM05D005478 ORTHO05D006426 3.1e-19 99.4 168 33.9
Lj2g0025845 Lotus japonicus HOM05D005478 ORTHO05D006426 3.1e-19 99.4 171 33.9
Sabra16G0222600 Salix brachista HOM05D005478 ORTHO05D006426 3.1e-19 99.4 177 35.0
Haze_14759 Corylus avellana HOM05D005478 ORTHO05D006426 4.0e-19 99.0 190 34.7
MELO3C026588.2 Cucumis melo HOM05D005478 ORTHO05D006426 4.0e-19 99.0 185 31.4
unitig_88.g27693 Utricularia gibba HOM05D000631 ORTHO05D000524 4.0e-19 99.0 171 33.9
HPP92_006182 Vanilla planifolia HOM05D005478 ORTHO05D006426 6.9e-19 98.2 170 33.5
Actinidia36124 Actinidia chinensis HOM05D005478 ORTHO05D006426 9.0e-19 97.8 182 31.3
BcaC06g30982 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-18 97.4 177 33.9
Sed0022021 Sechium edule HOM05D005478 ORTHO05D006426 1.2e-18 97.4 176 29.5
Hund15527 Selenicereus undatus HOM05D005478 ORTHO05D006426 1.2e-18 97.4 180 35.0
FAN02G1690 Fragaria x ananassa HOM05D005478 ORTHO05D006426 1.5e-18 97.1 190 36.3
AL5G16940 Arabidopsis lyrata HOM05D005478 ORTHO05D006426 2.0e-18 96.7 187 32.6
Lalb_Chr22g0360721 Lupinus albus HOM05D005478 ORTHO05D006426 2.0e-18 96.7 187 34.8
FAN05G2721 Fragaria x ananassa HOM05D005478 ORTHO05D006426 2.6e-18 96.3 190 35.8
PSO478G1356 Papaver somniferum HOM05D005478 ORTHO05D006426 2.6e-18 96.3 187 29.4
CARHR148890 Cardamine hirsuta HOM05D005478 ORTHO05D006426 3.4e-18 95.9 178 32.6
AUR62028419 Chenopodium quinoa HOM05D005478 ORTHO05D006426 3.4e-18 95.9 180 33.9
Migut.K01412 Erythranthe guttata HOM05D005478 ORTHO05D006426 3.4e-18 95.9 169 34.9
Thhalv10004961m.g Eutrema salsugineum HOM05D005478 ORTHO05D006426 3.4e-18 95.9 181 30.9
BcaB04g19441 Brassica carinata HOM05D005478 ORTHO05D006426 4.5e-18 95.5 179 36.9
AUR62041940 Chenopodium quinoa HOM05D005478 ORTHO05D006426 4.5e-18 95.5 180 32.2
arahy.Tifrunner.gnm1.ann1.47572L Arachis hypogaea HOM05D005478 ORTHO05D006426 5.8e-18 95.1 173 31.8
MSTRG.3284 Avicennia marina HOM05D005478 ORTHO05D006426 9.9e-18 94.4 188 33.5
Oeu033728.1 Olea europaea HOM05D005478 ORTHO05D006426 9.9e-18 94.4 181 32.6
PSO754G0087 Papaver somniferum HOM05D005478 ORTHO05D006426 9.9e-18 94.4 175 33.7
Psat1g053440 Pisum sativum HOM05D005478 ORTHO05D006426 1.3e-17 94.0 178 30.9
AT3G27520 Arabidopsis thaliana HOM05D005478 ORTHO05D006426 1.7e-17 93.6 191 30.9
FvH4_6g51790 Fragaria vesca HOM05D005478 ORTHO05D006426 1.7e-17 93.6 187 34.8
SEGI_00200 Sequoiadendron giganteum HOM05D005478 ORTHO05D006426 2.2e-17 93.2 163 32.5
Actinidia05981 Actinidia chinensis HOM05D005478 ORTHO05D006426 2.9e-17 92.8 176 31.8
FAN14G4849 Fragaria x ananassa HOM05D005478 ORTHO05D006426 3.8e-17 92.4 187 34.2
PSO017G4510 Papaver somniferum HOM05D005478 ORTHO05D006426 3.8e-17 92.4 186 29.0
PSO063G0871 Papaver somniferum HOM05D005478 ORTHO05D006426 3.8e-17 92.4 173 32.4
SGA_v2.0_scaffold47G17517 Striga asiatica HOM05D005478 ORTHO05D006426 3.8e-17 92.4 180 33.9
C07p36630 Brassica napus HOM05D005478 ORTHO05D006426 4.9e-17 92.0 177 32.2
DCAR_011260 Daucus carota HOM05D005478 ORTHO05D006426 4.9e-17 92.0 166 33.1
Manes.17G111100 Manihot esculenta HOM05D005478 ORTHO05D006426 4.9e-17 92.0 183 33.3
Actinidia18441 Actinidia chinensis HOM05D005478 ORTHO05D006426 6.4e-17 91.7 171 29.2
BcaC06g33809 Brassica carinata HOM05D005478 ORTHO05D006426 8.4e-17 91.3 177 32.8
FAN09G1593 Fragaria x ananassa HOM05D005478 ORTHO05D006426 8.4e-17 91.3 187 34.2
BolC7t44179H Brassica oleracea HOM05D005478 ORTHO05D006426 1.4e-16 90.5 177 32.2
Eucgr.I01730 Eucalyptus grandis HOM05D005478 ORTHO05D006426 1.9e-16 90.1 183 28.4
Oeu048609.1 Olea europaea HOM05D005478 ORTHO05D006426 3.2e-16 89.4 170 32.9
CANSAT64G0255 Cannabis sativa HOM05D005478 ORTHO05D006426 4.2e-16 89.0 170 34.1
RcHm_v2.0_Chr2g0173291 Rosa chinensis HOM05D005478 ORTHO05D006426 4.2e-16 89.0 142 38.7
BraA09t35982Z Brassica rapa HOM05D005478 ORTHO05D006426 9.3e-16 87.8 178 30.9
ECA238G3024 Erigeron canadensis HOM05D005478 ORTHO05D006426 9.3e-16 87.8 176 32.4
BcaC04g23900 Brassica carinata HOM05D005478 ORTHO05D006426 1.2e-15 87.4 178 31.5
C09p03650 Brassica napus HOM05D005478 ORTHO05D006426 1.2e-15 87.4 178 31.5
MBI14_g36718_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 1.2e-15 87.4 175 32.6
Peaxi162Scf00700g00430 Petunia axillaris HOM05D005478 ORTHO05D006426 1.2e-15 87.4 170 30.0
Sc07g0003180 Simmondsia chinensis HOM05D005478 ORTHO05D006426 1.6e-15 87.0 171 30.4
A09p03440 Brassica napus HOM05D005478 ORTHO05D006426 2.1e-15 86.7 178 30.9
Phvul.004G004600 Phaseolus vulgaris HOM05D005478 ORTHO05D006426 2.1e-15 86.7 175 29.1
CSS0007505 Camellia sinensis var. sinensis HOM05D005478 ORTHO05D006426 2.7e-15 86.3 176 29.5
Aqoxy5G03740 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 6.0e-15 85.1 184 28.3
A06p41110 Brassica napus HOM05D005478 ORTHO05D006426 7.9e-15 84.7 175 32.0
BraA06t27034Z Brassica rapa HOM05D005478 ORTHO05D006426 7.9e-15 84.7 175 32.0
BolC9t53284H Brassica oleracea HOM05D005478 ORTHO05D006426 1.0e-14 84.3 180 31.1
Rhsim10G0014600 Rhododendron simsii HOM05D005478 ORTHO05D006426 3.9e-14 82.4 178 28.7
SGA_v2.0_scaffold30G12408 Striga asiatica HOM05D005478 ORTHO05D006426 1.1e-13 80.9 180 31.1
THA.LOC104825211 Tarenaya hassleriana HOM05D005478 ORTHO05D006426 1.1e-13 80.9 148 35.8
arahy.Tifrunner.gnm1.ann1.WAXE9D Arachis hypogaea HOM05D005478 ORTHO05D006426 1.5e-13 80.5 199 28.1
Lalb_Chr24g0403571 Lupinus albus HOM05D005478 ORTHO05D006426 1.5e-13 80.5 186 29.0
HanXRQChr14g0451171 Helianthus annuus HOM05D005478 ORTHO05D006426 2.5e-13 79.7 171 30.4
Lsat_1_v5_gn_2_91160 Lactuca sativa HOM05D005478 ORTHO05D006426 2.5e-13 79.7 171 29.8
HanXRQChr07g0199031 Helianthus annuus HOM05D005478 ORTHO05D006426 4.3e-13 79.0 174 29.3
vmacro05877 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.1e-12 76.6 208 26.4
Aqoxy1G02464 Aquilegia oxysepala HOM05D005478 ORTHO05D006426 7.6e-10 68.2 161 27.3
Nn3g16214 Nelumbo nucifera HOM05D005478 ORTHO05D006426 2.9e-09 66.2 68 42.6
Cc07_g01510 Coffea canephora HOM05D005478 ORTHO05D006426 5.5e-08 62.0 61 42.6
Nitab4.5_0005593g0050 Nicotiana tabacum HOM05D005478 ORTHO05D006426 1.2e-07 60.8 163 28.2
vmacro18294 Vaccinium macrocarpon HOM05D005478 ORTHO05D006426 2.1e-07 60.1 213 22.5
Ah.02g128220 Amaranthus hybridus HOM05D005478 ORTHO05D006426 2.7e-07 59.7 184 25.5
Os02g0595300 Oryza sativa ssp. japonica HOM05D005478 ORTHO05D006426 2.7e-07 59.7 182 25.3
MBI10_g11211_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 3.5e-07 59.3 51 51.0
Nitab4.5_0000326g0190 Nicotiana tabacum HOM05D006502 ORTHO05D007704 2.3e-06 56.6 50 48.0
Dinv33426 Davidia involucrata HOM05D005478 ORTHO05D006426 3.0e-06 56.2 49 51.0
MBI07_g39476_MAGBIO Magnolia biondii HOM05D005478 ORTHO05D006426 5.1e-06 55.5 49 51.0


User provided reference genes

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