Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.0e-64 248.1 136 100.0
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 7.8e-60 233.8 131 96.9
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 4.8e-49 198.0 129 82.2
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 4.8e-49 198.0 129 81.4
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.1e-48 196.8 129 80.6
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 1.4e-48 196.4 129 80.6
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 1.8e-48 196.1 129 80.6
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 3.1e-48 195.3 129 79.8
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 5.3e-48 194.5 129 79.8
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 6.9e-48 194.1 129 79.8
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 9.0e-48 193.7 129 81.4
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 9.0e-48 193.7 129 79.8
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 1.5e-47 193.0 129 79.8
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 1.5e-47 193.0 127 80.3
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 2.6e-47 192.2 129 79.8
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 3.4e-47 191.8 127 80.3
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 4.5e-47 191.4 129 79.8
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 4.5e-47 191.4 129 79.8
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 4.5e-47 191.4 125 80.8
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 7.6e-47 190.7 127 79.5
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 7.6e-47 190.7 125 80.8
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 9.9e-47 190.3 129 78.3
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.3e-46 189.9 127 79.5
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.3e-46 189.9 128 78.1
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 1.3e-46 189.9 129 78.3
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 1.7e-46 189.5 128 78.1
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 1.7e-46 189.5 129 79.1
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.2e-46 189.1 127 79.5
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.2e-46 189.1 127 79.5
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 2.2e-46 189.1 125 79.2
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.9e-46 188.7 127 79.5
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 2.9e-46 188.7 127 78.7
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 4.9e-46 188.0 129 78.3
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 4.9e-46 188.0 127 77.2
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 6.4e-46 187.6 127 78.0
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 8.4e-46 187.2 129 75.2
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 8.4e-46 187.2 129 76.7
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 8.4e-46 187.2 125 79.2
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 8.4e-46 187.2 127 78.7
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 8.4e-46 187.2 127 77.2
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 1.1e-45 186.8 129 75.2
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.1e-45 186.8 125 79.2
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 1.1e-45 186.8 127 78.7
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.1e-45 186.8 127 77.2
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.1e-45 186.8 127 78.0
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 1.1e-45 186.8 127 76.4
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 1.1e-45 186.8 129 74.4
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.1e-45 186.8 129 74.4
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 1.4e-45 186.4 127 77.2
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.9e-45 186.0 129 76.0
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 2.4e-45 185.7 129 76.0
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.4e-45 185.7 127 78.7
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 2.4e-45 185.7 127 78.0
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 7.1e-45 184.1 129 76.0
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 7.1e-45 184.1 127 78.0
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 7.1e-45 184.1 125 78.4
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 7.1e-45 184.1 129 76.7
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 9.3e-45 183.7 125 76.8
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 9.3e-45 183.7 129 75.2
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 1.2e-44 183.3 129 74.4
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 1.2e-44 183.3 138 73.9
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 1.6e-44 183.0 127 74.8
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 1.6e-44 183.0 124 77.4
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 3.5e-44 181.8 128 77.3
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 4.6e-44 181.4 123 76.4
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.3e-43 179.9 127 77.2
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.7e-43 177.6 127 74.0
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 8.7e-43 177.2 127 72.4
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 8.7e-43 177.2 127 72.4
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 1.1e-42 176.8 129 70.5
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 1.1e-42 176.8 129 70.5
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 1.1e-42 176.8 129 70.5
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 1.1e-42 176.8 127 77.2
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 1.9e-42 176.0 129 70.5
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 1.9e-42 176.0 129 70.5
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 1.9e-42 176.0 121 75.2
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 7.4e-42 174.1 134 70.1
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 7.4e-42 174.1 132 71.2
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 1.6e-41 172.9 129 70.5
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.1e-41 170.6 142 67.6
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 8.1e-41 170.6 126 72.2
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 1.1e-40 170.2 106 84.0
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.1e-40 170.2 113 77.9
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.4e-40 169.9 127 72.4
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 6.9e-40 167.5 125 68.8
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 2.6e-39 165.6 113 77.0
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 5.8e-39 164.5 120 75.8
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 7.6e-39 164.1 104 82.7
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 1.3e-38 163.3 111 75.7
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.3e-38 163.3 128 68.8
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 2.9e-38 162.2 103 82.5
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 3.8e-38 161.8 103 83.5
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 3.8e-38 161.8 184 53.8
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 3.8e-38 161.8 113 74.3
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 4.9e-38 161.4 131 68.7
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 4.9e-38 161.4 120 74.2
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 4.9e-38 161.4 122 71.3
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 6.4e-38 161.0 111 73.9
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 8.4e-38 160.6 122 73.8
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 8.4e-38 160.6 109 78.0
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.4e-37 159.8 111 74.8
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 2.4e-37 159.1 112 78.6
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 7.1e-37 157.5 129 63.6
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.2e-36 156.8 103 78.6
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 4.6e-36 154.8 130 67.7
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 6.0e-36 154.5 113 70.8
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.8e-35 152.9 110 70.9
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 2.3e-35 152.5 129 65.9
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 3.0e-35 152.1 107 73.8
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 6.7e-35 151.0 128 67.2
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 1.9e-34 149.4 116 69.0
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 3.3e-34 148.7 92 83.7
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 4.3e-34 148.3 120 67.5
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 9.6e-34 147.1 92 82.6
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 1.8e-32 142.9 92 81.5
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 2.4e-32 142.5 92 78.3
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 3.1e-32 142.1 92 78.3
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 4.0e-32 141.7 131 61.8
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 1.2e-31 140.2 120 65.0
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 2.0e-31 139.4 159 52.8
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 3.4e-31 138.7 87 81.6
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 4.5e-31 138.3 92 77.2
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.0e-30 137.1 89 77.5
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 1.0e-30 137.1 87 81.6
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.8e-30 135.2 84 81.0
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 6.5e-30 134.4 117 66.7
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 6.5e-30 134.4 90 77.8
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 1.9e-29 132.9 95 71.6
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 5.5e-29 131.3 86 79.1
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 5.5e-29 131.3 85 81.2
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.1e-28 129.4 129 60.5
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.6e-28 128.3 100 74.0
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 7.4e-26 120.9 123 58.5
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.6e-25 119.8 93 72.0
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 2.4e-24 115.9 91 72.5
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 2.0e-23 112.8 73 80.8
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 2.0e-23 112.8 92 67.4
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 2.5e-21 105.9 77 74.0
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 1.8e-19 99.8 112 50.9
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 1.5e-18 96.7 63 77.8
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 3.3e-18 95.5 61 80.3
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.8e-16 89.7 121 40.5
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 1.8e-16 89.7 67 67.2
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 4.1e-16 88.6 64 68.8
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.2e-15 87.0 64 67.2
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 2.6e-15 85.9 78 57.7
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 5.9e-15 84.7 66 65.2
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.0e-14 84.0 64 67.2
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 3.8e-14 82.0 111 48.6
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 8.5e-14 80.9 114 36.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.1e-13 80.5 64 64.1
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 9.4e-13 77.4 51 78.4
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 1.7e-09 66.6 121 38.8
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 2.4e-08 62.8 123 33.3


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