Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.5e-181 638.6 328 100.0
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 3.6e-34 149.8 168 54.8
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 5.2e-33 146.0 202 46.5
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.2e-32 144.8 132 58.3
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.5e-32 144.4 132 59.8
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 2.6e-32 143.7 177 50.3
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 3.4e-32 143.3 197 48.2
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 4.4e-32 142.9 139 56.1
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 7.5e-32 142.1 138 58.0
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 1.3e-31 141.4 135 57.0
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.3e-31 141.4 107 68.2
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.7e-31 141.0 138 57.2
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.2e-31 140.6 135 54.8
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.2e-31 140.6 135 54.8
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 4.8e-31 139.4 194 46.9
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 4.8e-31 139.4 133 56.4
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 6.3e-31 139.0 135 54.8
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 8.3e-31 138.7 135 54.8
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 1.1e-30 138.3 104 64.4
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 1.8e-30 137.5 183 47.5
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 3.1e-30 136.7 133 56.4
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.4e-30 136.0 133 54.1
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 5.4e-30 136.0 107 66.4
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 7.0e-30 135.6 133 54.9
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 7.0e-30 135.6 101 67.3
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 7.0e-30 135.6 101 66.3
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 9.1e-30 135.2 101 67.3
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 1.2e-29 134.8 166 49.4
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.2e-29 134.8 101 67.3
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.2e-29 134.8 101 67.3
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 1.2e-29 134.8 99 69.7
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.2e-29 134.8 114 60.5
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.6e-29 134.4 135 54.1
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 1.6e-29 134.4 133 54.1
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 2.0e-29 134.0 156 53.8
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.7e-29 133.7 135 52.6
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 3.5e-29 133.3 145 51.0
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 4.5e-29 132.9 162 48.8
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 5.9e-29 132.5 100 66.0
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 5.9e-29 132.5 129 55.0
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.0e-28 131.7 133 54.9
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.0e-28 131.7 107 59.8
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 1.0e-28 131.7 145 54.5
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.3e-28 131.3 127 52.0
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 1.7e-28 131.0 107 62.6
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 2.2e-28 130.6 102 63.7
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 2.2e-28 130.6 155 52.9
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 2.2e-28 130.6 173 46.8
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 2.2e-28 130.6 138 52.2
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 3.8e-28 129.8 155 50.3
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 5.0e-28 129.4 133 54.9
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 6.5e-28 129.0 128 55.5
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 6.5e-28 129.0 132 53.0
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 8.5e-28 128.6 136 54.4
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 8.5e-28 128.6 157 49.7
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 8.5e-28 128.6 133 54.1
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 1.1e-27 128.3 266 38.3
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 1.5e-27 127.9 164 47.6
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.9e-27 127.5 189 40.7
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 2.5e-27 127.1 129 55.8
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 3.2e-27 126.7 127 55.1
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 3.2e-27 126.7 133 54.9
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 4.2e-27 126.3 109 57.8
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 4.2e-27 126.3 155 49.0
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 7.2e-27 125.6 109 60.6
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 9.5e-27 125.2 151 51.7
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.2e-26 124.8 109 56.9
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.1e-26 124.0 142 52.8
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 2.1e-26 124.0 125 50.4
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 2.8e-26 123.6 139 51.1
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 2.8e-26 123.6 128 51.6
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 4.7e-26 122.9 139 51.1
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 4.7e-26 122.9 139 51.1
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 4.7e-26 122.9 139 51.1
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 1.0e-25 121.7 99 57.6
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 1.0e-25 121.7 197 43.1
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 1.4e-25 121.3 97 62.9
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.8e-25 120.9 141 46.1
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 4.0e-25 119.8 125 56.0
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.2e-24 118.2 154 44.8
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 2.6e-24 117.1 118 54.2
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 5.7e-24 115.9 105 56.2
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 7.5e-24 115.5 139 51.1
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 1.7e-23 114.4 97 56.7
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 2.8e-23 113.6 102 56.9
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 8.3e-23 112.1 139 46.8
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 1.8e-22 110.9 85 64.7
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 2.4e-22 110.5 125 51.2
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 4.1e-22 109.8 198 37.9
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 2.3e-17 94.0 102 46.1
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 6.8e-17 92.4 129 45.7
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 1.5e-16 91.3 176 36.4
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.7e-15 86.7 46 84.8
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 3.7e-15 86.7 118 47.5
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 8.3e-15 85.5 159 43.4
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.8e-14 84.3 119 41.2
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.2e-13 81.6 97 51.5
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 3.3e-11 73.6 49 65.3
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 7.3e-11 72.4 59 59.3
CAN.G2262.2 Capsicum annuum HOM05D000099 ORTHO05D002060 1.6e-10 71.2 53 62.3
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 2.8e-10 70.5 121 41.3
Sopen00g002300 Solanum pennellii HOM05D000099 ORTHO05D002060 3.6e-10 70.1 81 50.6
Sopen00g004820 Solanum pennellii HOM05D001819 ORTHO05D002060 3.6e-10 70.1 81 50.6
Sopen00g007440 Solanum pennellii HOM05D000099 ORTHO05D002060 3.6e-10 70.1 81 50.6
Sopen00g014360 Solanum pennellii HOM05D000099 ORTHO05D002060 3.6e-10 70.1 81 50.6
Sopen00g014400 Solanum pennellii HOM05D000099 ORTHO05D000205 3.6e-10 70.1 81 50.6
Sopen06g010040 Solanum pennellii HOM05D001819 ORTHO05D001730 3.6e-10 70.1 81 50.6
Sopen07g009380 Solanum pennellii HOM05D000099 ORTHO05D000205 3.6e-10 70.1 81 50.6
unitig_797.g34470 Utricularia gibba HOM05D001819 ORTHO05D002060 4.7e-10 69.7 142 38.7
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.4e-09 68.2 85 44.7
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 1.8e-09 67.8 116 46.6
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 1.8e-09 67.8 116 46.6
CAN.G2428.1 Capsicum annuum HOM05D000099 ORTHO05D000205 1.2e-08 65.1 108 38.0
HPP92_007155 Vanilla planifolia HOM05D000099 ORTHO05D002060 1.5e-08 64.7 37 81.1
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 2.0e-08 64.3 227 30.0
Oeu008744.3 Olea europaea HOM05D000099 ORTHO05D000205 2.0e-08 64.3 151 32.5
unitig_885.g34256 Utricularia gibba HOM05D001819 ORTHO05D001730 2.6e-08 63.9 89 42.7
Potri.008G224093 Populus trichocarpa HOM05D010346 ORTHO05D003742 3.4e-08 63.5 52 63.5
unitig_102.g31710 Utricularia gibba HOM05D000099 ORTHO05D002060 3.4e-08 63.5 77 48.1
unitig_146.g30239 Utricularia gibba HOM05D000099 ORTHO05D002060 3.4e-08 63.5 77 48.1
unitig_670.g34681 Utricularia gibba HOM05D001819 ORTHO05D001730 3.4e-08 63.5 77 48.1
unitig_682.g30146 Utricularia gibba HOM05D000099 ORTHO05D002060 3.4e-08 63.5 77 48.1
unitig_683.g34675 Utricularia gibba HOM05D001819 ORTHO05D001730 3.4e-08 63.5 77 48.1
unitig_813.g34381 Utricularia gibba HOM05D000099 ORTHO05D002060 3.4e-08 63.5 77 48.1
unitig_99.g29797 Utricularia gibba HOM05D000099 ORTHO05D000205 3.4e-08 63.5 77 48.1
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 5.8e-08 62.8 156 39.1
unitig_218.g35412 Utricularia gibba HOM05D000099 ORTHO05D002060 5.8e-08 62.8 77 48.1
arahy.Tifrunner.gnm1.ann1.1C5B46 Arachis hypogaea HOM05D000099 ORTHO05D000205 9.8e-08 62.0 37 78.4
FAN28G2699 Fragaria x ananassa HOM05D000099 ORTHO05D002060 9.8e-08 62.0 37 78.4
CAN.G208.82 Capsicum annuum HOM05D000099 ORTHO05D000205 1.3e-07 61.6 44 65.9
CAN.G1991.4 Capsicum annuum HOM05D000099 ORTHO05D002060 1.7e-07 61.2 52 55.8
CAN.G2147.3 Capsicum annuum HOM05D000099 ORTHO05D002060 2.2e-07 60.8 53 52.8
Sed0006145 Sechium edule HOM05D001819 ORTHO05D001730 2.2e-07 60.8 88 43.2
unitig_203.g33387 Utricularia gibba HOM05D001819 ORTHO05D002060 2.2e-07 60.8 40 70.0
unitig_644.g34720 Utricularia gibba HOM05D001819 ORTHO05D001730 2.2e-07 60.8 40 70.0
unitig_654.g34703 Utricularia gibba HOM05D000099 ORTHO05D002060 2.2e-07 60.8 40 70.0
unitig_668.g29652 Utricularia gibba HOM05D001819 ORTHO05D001730 2.2e-07 60.8 40 70.0
unitig_678.g33161 Utricularia gibba HOM05D000099 ORTHO05D002060 2.2e-07 60.8 40 70.0
unitig_789.g33558 Utricularia gibba HOM05D000099 ORTHO05D002060 2.2e-07 60.8 40 70.0
unitig_124.g30887 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_130.g30072 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_144.g31411 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_165.g34178 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_165.g34189 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_172.g35466 Utricularia gibba HOM05D001819 ORTHO05D001730 2.9e-07 60.5 37 75.7
unitig_200.g30601 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_548.g34894 Utricularia gibba HOM05D001819 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_550.g34864 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_556.g34858 Utricularia gibba HOM05D001819 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_579.g34815 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_631.g33679 Utricularia gibba HOM05D001819 ORTHO05D001730 2.9e-07 60.5 37 75.7
unitig_631.g33691 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_631.g33703 Utricularia gibba HOM05D001819 ORTHO05D001730 2.9e-07 60.5 37 75.7
unitig_635.g33657 Utricularia gibba HOM05D001819 ORTHO05D001730 2.9e-07 60.5 37 75.7
unitig_722.g33123 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_814.g34349 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_833.g29497 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_833.g29505 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_838.g29061 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_881.g33019 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
unitig_893.g29390 Utricularia gibba HOM05D000099 ORTHO05D002060 2.9e-07 60.5 37 75.7
arahy.Tifrunner.gnm1.ann1.7L9DG2 Arachis hypogaea HOM05D000099 ORTHO05D002060 3.7e-07 60.1 37 73.0
arahy.Tifrunner.gnm1.ann1.00KTF5 Arachis hypogaea HOM05D000099 ORTHO05D000205 4.9e-07 59.7 37 75.7
Sopen00g006320 Solanum pennellii HOM05D003742 ORTHO05D002060 4.9e-07 59.7 42 66.7
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 8.3e-07 58.9 149 36.2
arahy.Tifrunner.gnm1.ann1.I66GUF Arachis hypogaea HOM05D000099 ORTHO05D000205 1.1e-06 58.5 35 77.1
BcaNung04858 Brassica carinata HOM05D000099 ORTHO05D002060 1.1e-06 58.5 36 75.0
CAN.G208.83 Capsicum annuum HOM05D001819 ORTHO05D002060 1.1e-06 58.5 53 52.8
CAN.G2390.3 Capsicum annuum HOM05D000099 ORTHO05D000205 3.2e-06 57.0 46 56.5
BolC8t47672H Brassica oleracea HOM05D000099 ORTHO05D002060 4.1e-06 56.6 37 73.0
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.1e-06 56.6 162 35.2
Oeu039691.1 Olea europaea HOM05D001819 ORTHO05D001730 7.0e-06 55.8 36 69.4
Sopen00g002230 Solanum pennellii HOM05D000099 ORTHO05D002060 9.2e-06 55.5 76 46.1


User provided reference genes

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