Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0757 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 5.9e-112 407.5 203 100.0
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 6.6e-79 297.7 178 84.3
CDE09G0455 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 2.1e-77 292.7 156 92.9
CDE04G1779 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 5.3e-36 155.2 82 91.5
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 9.1e-12 74.7 127 38.6
MBI07_g44810_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.5e-11 73.9 129 39.5
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 7.7e-11 71.6 139 34.5
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 2.2e-10 70.1 124 37.1
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 2.9e-10 69.7 124 37.1
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 2.9e-10 69.7 124 37.1
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 2.9e-10 69.7 132 35.6
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 2.9e-10 69.7 140 34.3
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 3.8e-10 69.3 178 34.3
QL07p001298 Quercus lobata HOM05D004345 ORTHO05D005192 5.0e-10 68.9 140 34.3
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 6.5e-10 68.6 142 33.8
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 1.4e-09 67.4 127 37.0
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.9e-09 67.0 144 34.7
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 3.2e-09 66.2 123 37.4
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 4.2e-09 65.9 125 34.4
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 4.2e-09 65.9 127 33.9
Sp3g16450 Schrenkiella parvula HOM05D004345 ORTHO05D005192 7.2e-09 65.1 124 36.3
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 1.2e-08 64.3 184 29.9
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 1.2e-08 64.3 130 37.7
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 1.6e-08 63.9 102 40.2
A05p31330 Brassica napus HOM05D004345 ORTHO05D005192 2.1e-08 63.5 127 33.9
BraA05t21971Z Brassica rapa HOM05D004345 ORTHO05D005192 2.1e-08 63.5 127 33.9
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 2.7e-08 63.2 129 34.9
THA.LOC104807021 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 3.6e-08 62.8 122 34.4
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 6.1e-08 62.0 79 40.5
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 6.1e-08 62.0 178 32.6
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 7.9e-08 61.6 191 28.3
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 7.9e-08 61.6 191 28.3
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 7.9e-08 61.6 127 35.4
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 7.9e-08 61.6 98 35.7
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 1.0e-07 61.2 127 36.2
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 1.4e-07 60.8 127 33.9
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.4e-07 60.8 127 35.4
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 2.3e-07 60.1 127 33.9
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 2.3e-07 60.1 111 35.1
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 3.9e-07 59.3 117 33.3
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 5.1e-07 58.9 120 31.7
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 5.1e-07 58.9 145 33.8
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 6.7e-07 58.5 124 34.7
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 6.7e-07 58.5 86 39.5
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.1e-06 57.8 139 30.9
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 1.1e-06 57.8 140 31.4
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 1.5e-06 57.4 125 36.0
Thhalv10003730m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 2.0e-06 57.0 120 33.3
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 2.0e-06 57.0 131 29.0
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 2.0e-06 57.0 124 33.1
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 2.0e-06 57.0 128 30.5
Zm00001eb399070 Zea mays HOM05D004345 ORTHO05D005192 2.0e-06 57.0 113 31.9
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 3.3e-06 56.2 128 32.0
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 4.4e-06 55.8 132 31.8
ECA238G4368 Erigeron canadensis HOM05D004345 ORTHO05D005192 4.4e-06 55.8 100 37.0
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 5.7e-06 55.5 96 35.4
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 7.4e-06 55.1 133 31.6
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 7.4e-06 55.1 185 27.6


User provided reference genes

Program Settings