Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0720 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 7.1e-141 503.8 238 100.0
CDE08G0294 Ceratophyllum demersum HOM05D006850 ORTHO05D008545 1.4e-109 399.8 220 87.7
Potri.001G275300 Populus trichocarpa HOM05D006850 ORTHO05D008545 1.4e-64 250.4 229 54.1
Hma1.2p1_0262F.1_g105345 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.6e-63 246.9 223 54.3
Hma1.2p1_3601F.1_g336990 Hydrangea macrophylla HOM05D006850 ORTHO05D008545 1.6e-63 246.9 223 54.3
SGA_v2.0_scaffold29G12238 Striga asiatica HOM05D006850 ORTHO05D008545 5.0e-62 241.9 210 56.2
TAR633G0745 Trochodendron aralioides HOM05D006850 ORTHO05D008545 5.0e-62 241.9 189 58.2
arahy.Tifrunner.gnm1.ann1.TFQN26 Arachis hypogaea HOM05D006850 ORTHO05D008545 6.6e-62 241.5 228 52.6
Cpa.g.sc157.64 Carica papaya HOM05D006850 ORTHO05D008545 6.6e-62 241.5 196 58.2
Peaxi162Scf00032g02418 Petunia axillaris HOM05D006850 ORTHO05D008545 6.6e-62 241.5 213 56.3
unitig_0.g300 Utricularia gibba HOM05D006850 ORTHO05D008545 6.6e-62 241.5 147 71.4
ATR0745G042 Amborella trichopoda HOM05D006850 ORTHO05D008545 8.6e-62 241.1 148 72.3
CSS0022862 Camellia sinensis var. sinensis HOM05D006850 ORTHO05D008545 8.6e-62 241.1 220 55.5
Gohir.D07G123600 Gossypium hirsutum HOM05D006850 ORTHO05D008545 8.6e-62 241.1 197 58.4
HanXRQChr14g0427601 Helianthus annuus HOM05D006850 ORTHO05D008545 8.6e-62 241.1 187 60.4
arahy.Tifrunner.gnm1.ann1.5G2EZD Arachis hypogaea HOM05D006850 ORTHO05D008545 1.1e-61 240.7 228 52.2
Aqoxy1G00367 Aquilegia oxysepala HOM05D006850 ORTHO05D008545 1.5e-61 240.4 213 54.0
Gohir.A07G119400 Gossypium hirsutum HOM05D006850 ORTHO05D008545 1.5e-61 240.4 185 61.1
Gorai.001G133600 Gossypium raimondii HOM05D006850 ORTHO05D008545 1.5e-61 240.4 185 61.1
GSVIVG01037285001 Vitis vinifera HOM05D006850 ORTHO05D008545 3.3e-61 239.2 192 59.4
Ciclev10016719m.g Citrus clementina HOM05D006850 ORTHO05D008545 5.6e-61 238.4 197 55.8
QL01p017096 Quercus lobata HOM05D006850 ORTHO05D008545 5.6e-61 238.4 185 59.5
CANSAT54G0445 Cannabis sativa HOM05D006850 ORTHO05D008545 7.3e-61 238.0 193 59.1
Haze_23232 Corylus avellana HOM05D006850 ORTHO05D008545 7.3e-61 238.0 191 58.6
DCAR_024408 Daucus carota HOM05D006850 ORTHO05D008545 7.3e-61 238.0 129 76.7
Lj6g0025243 Lotus japonicus HOM05D006850 ORTHO05D008545 7.3e-61 238.0 172 66.3
TWI31G0452 Tripterygium wilfordii HOM05D006850 ORTHO05D008545 7.3e-61 238.0 235 48.9
EL10Ac4g10117 Beta vulgaris HOM05D006850 ORTHO05D008545 9.5e-61 237.7 211 53.6
Eucgr.B03735 Eucalyptus grandis HOM05D006850 ORTHO05D008545 9.5e-61 237.7 228 50.9
Actinidia06966 Actinidia chinensis HOM05D006850 ORTHO05D008545 1.2e-60 237.3 221 52.5
ECA238G2187 Erigeron canadensis HOM05D006850 ORTHO05D008545 1.2e-60 237.3 122 81.1
Hund07436 Selenicereus undatus HOM05D006850 ORTHO05D008545 2.8e-60 236.1 194 57.7
Oeu030634.1 Olea europaea HOM05D006850 ORTHO05D008545 4.7e-60 235.3 223 52.5
Sabra16G0169600 Salix brachista HOM05D006850 ORTHO05D008545 4.7e-60 235.3 239 49.8
Duzib150G1265 Durio zibethinus HOM05D006850 ORTHO05D008545 6.1e-60 235.0 191 58.6
Lsat_1_v5_gn_2_3500 Lactuca sativa HOM05D006850 ORTHO05D008545 6.1e-60 235.0 183 59.6
MD03G1165500 Malus domestica HOM05D006850 ORTHO05D008545 6.1e-60 235.0 190 57.9
Cfa009858 Carpinus fangiana HOM05D006850 ORTHO05D008545 8.0e-60 234.6 191 58.1
Dinv36163 Davidia involucrata HOM05D006850 ORTHO05D008545 8.0e-60 234.6 184 59.8
vmacro04034 Vaccinium macrocarpon HOM05D006850 ORTHO05D008545 1.0e-59 234.2 123 79.7
Manes.01G178500 Manihot esculenta HOM05D006850 ORTHO05D008545 2.3e-59 233.0 223 52.5
Sc06g0004690 Simmondsia chinensis HOM05D006850 ORTHO05D008545 2.3e-59 233.0 199 56.8
Cc01_g05370 Coffea canephora HOM05D006850 ORTHO05D008545 3.1e-59 232.6 222 51.4
Prupe.4G265500 Prunus persica HOM05D006850 ORTHO05D008545 3.1e-59 232.6 192 56.8
PSO384G2311 Papaver somniferum HOM05D006850 ORTHO05D008545 5.2e-59 231.9 206 54.4
Duzib170G0642 Durio zibethinus HOM05D006850 ORTHO05D008545 6.8e-59 231.5 237 50.2
Atru.chr3.2891 Acer truncatum HOM05D006850 ORTHO05D008545 8.9e-59 231.1 128 74.2
BcaC09g51693 Brassica carinata HOM05D006850 ORTHO05D008545 1.2e-58 230.7 211 54.0
BolC1t01003H Brassica oleracea HOM05D006850 ORTHO05D008545 1.2e-58 230.7 211 54.5
Glyma.07G232000 Glycine max HOM05D006850 ORTHO05D008545 1.2e-58 230.7 191 59.2
CiPaw.14G112900 Carya illinoinensis HOM05D006850 ORTHO05D008545 2.0e-58 229.9 191 59.2
MELO3C014560.2 Cucumis melo HOM05D006850 ORTHO05D008545 2.0e-58 229.9 141 71.6
MBI07_g21930_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.0e-58 229.9 199 55.3
MBI07_g26873_MAGBIO Magnolia biondii HOM05D006850 ORTHO05D008545 2.0e-58 229.9 199 55.3
VMungo0540G1950 Vigna mungo HOM05D006850 ORTHO05D008545 2.0e-58 229.9 148 69.6
Ah.06g194580 Amaranthus hybridus HOM05D006850 ORTHO05D008545 2.6e-58 229.6 210 51.4
CsaV3_6G038970 Cucumis sativus L. HOM05D006850 ORTHO05D008545 2.6e-58 229.6 142 70.4
Migut.D00666 Erythranthe guttata HOM05D006850 ORTHO05D008545 2.6e-58 229.6 164 64.0
Manes.02G139100 Manihot esculenta HOM05D006850 ORTHO05D008545 2.6e-58 229.6 193 56.5
SalBow6G2930 Salvia bowleyana HOM05D006850 ORTHO05D008545 3.4e-58 229.2 136 72.8
Sopen01g004290 Solanum pennellii HOM05D006850 ORTHO05D008545 3.4e-58 229.2 187 60.4
BcaNung01334 Brassica carinata HOM05D004115 ORTHO05D005004 4.4e-58 228.8 214 54.2
Glyma.20G041000 Glycine max HOM05D006850 ORTHO05D008545 5.8e-58 228.4 177 60.5
PSO339G1255 Papaver somniferum HOM05D006850 ORTHO05D008545 5.8e-58 228.4 206 53.4
Thhalv10026099m.g Eutrema salsugineum HOM05D006850 ORTHO05D008545 7.5e-58 228.0 213 53.5
Lalb_Chr21g0314461 Lupinus albus HOM05D006850 ORTHO05D008545 7.5e-58 228.0 169 62.7
Solyc01g008780.3 Solanum lycopersicum HOM05D006850 ORTHO05D008545 7.5e-58 228.0 123 78.0
ClCG02G022830 Citrullus lanatus HOM05D006850 ORTHO05D008545 9.8e-58 227.6 191 57.1
Rhsim13G0209200 Rhododendron simsii HOM05D006850 ORTHO05D008545 9.8e-58 227.6 225 51.6
AL7G23370 Arabidopsis lyrata HOM05D006850 ORTHO05D008545 1.3e-57 227.3 193 57.0
CARHR236810 Cardamine hirsuta HOM05D006850 ORTHO05D008545 1.3e-57 227.3 183 59.6
AUR62000194 Chenopodium quinoa HOM05D006850 ORTHO05D008545 1.3e-57 227.3 195 55.9
PGR102G2982 Punica granatum HOM05D006850 ORTHO05D008545 1.3e-57 227.3 191 56.0
MSTRG.18462 Avicennia marina HOM05D006850 ORTHO05D008545 1.7e-57 226.9 123 79.7
RcHm_v2.0_Chr5g0050481 Rosa chinensis HOM05D006850 ORTHO05D008545 2.2e-57 226.5 175 62.3
Sed0015967 Sechium edule HOM05D006850 ORTHO05D008545 2.9e-57 226.1 144 67.4
AUR62006544 Chenopodium quinoa HOM05D006850 ORTHO05D008545 3.7e-57 225.7 188 58.0
Medtr0180s0050 Medicago truncatula HOM05D006850 ORTHO05D008545 4.9e-57 225.3 168 63.7
Phvul.006G014500 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 4.9e-57 225.3 122 77.0
Psat0s3115g0040 Pisum sativum HOM05D006850 ORTHO05D008545 6.4e-57 224.9 125 76.0
PGSC0003DMG400022716 Solanum tuberosum HOM05D006850 ORTHO05D008545 6.4e-57 224.9 191 56.5
Aa31LG2G21380 Aethionema arabicum HOM05D006850 ORTHO05D008545 8.3e-57 224.6 226 51.3
AT4G29070 Arabidopsis thaliana HOM05D006850 ORTHO05D008545 8.3e-57 224.6 136 72.8
THA.LOC104826454 Tarenaya hassleriana HOM05D006850 ORTHO05D008545 8.3e-57 224.6 185 62.2
Sp7g27010 Schrenkiella parvula HOM05D006850 ORTHO05D008545 1.1e-56 224.2 212 52.8
TPR.G16604 Trifolium pratense HOM05D006850 ORTHO05D008545 1.1e-56 224.2 125 75.2
Hund21980 Selenicereus undatus HOM05D006850 ORTHO05D008545 1.9e-56 223.4 184 57.6
BolC8t48803H Brassica oleracea HOM05D006850 ORTHO05D008545 2.4e-56 223.0 179 59.8
FAN16G3159 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.4e-56 223.0 128 74.2
FAN25G3781 Fragaria x ananassa HOM05D006850 ORTHO05D008545 2.4e-56 223.0 128 74.2
BcaC07g38376 Brassica carinata HOM05D006850 ORTHO05D008545 4.1e-56 222.2 169 61.5
C08p11310 Brassica napus HOM05D006850 ORTHO05D008545 4.1e-56 222.2 169 61.5
FvH4_3g27811 Fragaria vesca HOM05D006850 ORTHO05D008545 4.1e-56 222.2 128 74.2
Ca_03895_v3 Cicer arietinum L. HOM05D006850 ORTHO05D008545 5.4e-56 221.9 140 70.0
HPP92_025151 Vanilla planifolia HOM05D006850 ORTHO05D008545 5.4e-56 221.9 124 75.8
A08p19760 Brassica napus HOM05D004115 ORTHO05D008545 7.0e-56 221.5 201 54.2
FAN21G1525 Fragaria x ananassa HOM05D006850 ORTHO05D008545 7.0e-56 221.5 213 52.1
BraA08t33936Z Brassica rapa HOM05D004115 ORTHO05D008545 1.2e-55 220.7 179 59.2
Carub.0007s1152 Capsella rubella HOM05D006850 ORTHO05D008545 1.2e-55 220.7 124 75.8
Sed0010964 Sechium edule HOM05D006850 ORTHO05D008545 5.0e-54 215.3 216 48.6
Thecc.09G248000 Theobroma cacao HOM05D006850 ORTHO05D008545 1.9e-53 213.4 110 80.0
CAN.G64.14 Capsicum annuum HOM05D006850 ORTHO05D008545 2.5e-53 213.0 257 48.2
COL.COLO4_32765 Corchorus olitorius HOM05D006850 ORTHO05D008545 4.3e-53 212.2 111 78.4
Nn7g36731 Nelumbo nucifera HOM05D006850 ORTHO05D008545 9.5e-53 211.1 172 59.3
A01p08930 Brassica napus HOM05D004115 ORTHO05D005004 1.2e-52 210.7 176 56.8
BraA01t00839Z Brassica rapa HOM05D004115 ORTHO05D005004 1.2e-52 210.7 176 56.8
SEGI_38632 Sequoiadendron giganteum HOM05D006850 ORTHO05D008545 1.2e-52 210.7 122 69.7
Nitab4.5_0000718g0310 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.6e-52 210.3 168 62.5
Lj1P279T21 Lonicera japonica HOM05D006850 ORTHO05D008545 3.1e-51 206.1 106 78.3
Nitab4.5_0003488g0060 Nicotiana tabacum HOM05D006850 ORTHO05D008545 1.3e-49 200.7 188 54.8
Phvul.009G232900 Phaseolus vulgaris HOM05D006850 ORTHO05D008545 3.7e-49 199.1 144 61.1
SHI34292 Sapria himalayana HOM05D006850 ORTHO05D008545 3.1e-43 179.5 101 73.3
Mapoly0002s0074 Marchantia polymorpha HOM05D006850 ORTHO05D008545 4.3e-37 159.1 124 54.8
Pp3c15_13470 Physcomitrium patens HOM05D006850 ORTHO05D008545 1.1e-32 144.4 127 50.4
BcaB03g12596 Brassica carinata HOM05D006850 ORTHO05D008545 3.2e-32 142.9 179 45.8
Pp3c9_17190 Physcomitrium patens HOM05D006850 ORTHO05D008545 7.1e-32 141.7 122 51.6
SMO145G0227 Selaginella moellendorffii HOM05D006850 ORTHO05D008545 9.2e-32 141.4 86 61.6
HPP92_025149 Vanilla planifolia HOM05D006850 ORTHO05D008545 1.9e-29 133.7 81 69.1
CBR_g29725 Chara braunii HOM05D006850 ORTHO05D008545 3.1e-27 126.3 102 52.0
Actinidia13010 Actinidia chinensis HOM05D006850 ORTHO05D008545 2.7e-07 60.1 139 30.9


User provided reference genes

Program Settings