Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0709 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 1.6e-288 995.3 490 100.0
TAR374G1237 Trochodendron aralioides HOM05D003867 ORTHO05D004593 3.0e-271 937.9 487 93.6
Nn3g16522 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.2e-270 936.0 487 92.6
Nn4g22382 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.3e-270 934.5 487 93.2
Gohir.D12G152000 Gossypium hirsutum HOM05D003867 ORTHO05D004593 2.2e-269 931.8 486 91.4
Gohir.A12G147700 Gossypium hirsutum HOM05D003867 ORTHO05D004593 4.8e-269 930.6 486 89.9
Gorai.008G164400 Gossypium raimondii HOM05D003867 ORTHO05D004593 1.1e-268 929.5 484 91.7
COL.COLO4_12823 Corchorus olitorius HOM05D003867 ORTHO05D004593 1.6e-267 925.6 486 91.4
Gorai.001G109800 Gossypium raimondii HOM05D003867 ORTHO05D004593 3.5e-267 924.5 486 90.9
MBI11_g06772_MAGBIO Magnolia biondii HOM05D003867 ORTHO05D004593 1.0e-266 922.9 487 90.6
Thecc.02G275800 Theobroma cacao HOM05D003867 ORTHO05D004593 1.3e-266 922.5 486 91.4
Duzib251G0884 Durio zibethinus HOM05D003867 ORTHO05D004593 1.7e-266 922.2 486 90.7
Duzib268G1394 Durio zibethinus HOM05D003867 ORTHO05D004593 1.7e-266 922.2 486 91.2
Gohir.D07G101900 Gossypium hirsutum HOM05D003867 ORTHO05D004593 8.5e-266 919.8 486 90.5
PSO063G4816 Papaver somniferum HOM05D003867 ORTHO05D004593 1.5e-265 919.1 488 91.8
Cpa.g.sc257.6 Carica papaya HOM05D003867 ORTHO05D004593 3.2e-265 917.9 486 90.1
CSS0021164 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 4.2e-265 917.5 486 90.3
Prupe.1G231900 Prunus persica HOM05D003867 ORTHO05D004593 5.5e-265 917.1 486 90.9
Gohir.A07G097600 Gossypium hirsutum HOM05D003867 ORTHO05D004593 9.4e-265 916.4 486 89.5
Manes.12G014300 Manihot esculenta HOM05D003867 ORTHO05D004593 1.2e-264 916.0 486 90.3
CSS0008021 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 1.6e-264 915.6 486 90.1
Migut.E00031 Erythranthe guttata HOM05D003867 ORTHO05D004593 1.6e-264 915.6 487 90.6
PSO782G1516 Papaver somniferum HOM05D003867 ORTHO05D004593 1.6e-264 915.6 488 91.6
Duzib248G0225 Durio zibethinus HOM05D003867 ORTHO05D004593 2.1e-264 915.2 486 90.5
CANSAT64G1093 Cannabis sativa HOM05D003867 ORTHO05D004593 2.7e-264 914.8 483 90.9
MELO3C009702.2 Cucumis melo HOM05D003867 ORTHO05D004593 4.7e-264 914.1 486 89.9
TWI36G0688 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 4.7e-264 914.1 486 90.3
Haze_12379 Corylus avellana HOM05D003867 ORTHO05D004593 6.1e-264 913.7 484 91.1
Oeu020305.1 Olea europaea HOM05D003867 ORTHO05D004593 8.0e-264 913.3 487 90.8
CsaV3_3G039600 Cucumis sativus L. HOM05D003867 ORTHO05D004593 1.0e-263 912.9 486 89.9
CiPaw.05G113400 Carya illinoinensis HOM05D003867 ORTHO05D004593 1.4e-263 912.5 486 90.3
Hund25446 Selenicereus undatus HOM05D003867 ORTHO05D004593 3.0e-263 911.4 481 91.5
Rhsim12G0153900 Rhododendron simsii HOM05D003867 ORTHO05D004593 4.0e-263 911.0 486 89.9
MD13G1115400 Malus domestica HOM05D003867 ORTHO05D004593 5.2e-263 910.6 486 90.5
QL03p054504 Quercus lobata HOM05D003867 ORTHO05D004593 5.2e-263 910.6 486 91.4
Solyc02g087240.4 Solanum lycopersicum HOM05D003867 ORTHO05D004593 6.8e-263 910.2 487 89.3
Sopen02g031980 Solanum pennellii HOM05D003867 ORTHO05D004593 6.8e-263 910.2 487 89.3
DCAR_007011 Daucus carota HOM05D003867 ORTHO05D004593 8.8e-263 909.8 487 89.5
RcHm_v2.0_Chr4g0430891 Rosa chinensis HOM05D003867 ORTHO05D004593 8.8e-263 909.8 486 91.2
Sed0026140 Sechium edule HOM05D003867 ORTHO05D004593 8.8e-263 909.8 486 90.1
ATR0564G372 Amborella trichopoda HOM05D003867 ORTHO05D004593 2.0e-262 908.7 485 90.1
FvH4_4g24110 Fragaria vesca HOM05D003867 ORTHO05D004593 2.0e-262 908.7 486 90.7
MD16G1115300 Malus domestica HOM05D003867 ORTHO05D004593 2.0e-262 908.7 486 90.9
Hund06074 Selenicereus undatus HOM05D003867 ORTHO05D004593 3.4e-262 907.9 484 90.7
Potri.010G057400 Populus trichocarpa HOM05D003867 ORTHO05D004593 4.4e-262 907.5 486 89.3
vmacro15114 Vaccinium macrocarpon HOM05D003867 ORTHO05D004593 4.4e-262 907.5 483 89.4
Aqoxy3G01483 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 5.7e-262 907.1 486 89.7
DCAR_031187 Daucus carota HOM05D003867 ORTHO05D004593 9.8e-262 906.4 485 89.5
PGSC0003DMG400001292 Solanum tuberosum HOM05D003867 ORTHO05D004593 9.8e-262 906.4 487 88.9
THA.LOC104819362 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 1.7e-261 905.6 486 89.9
arahy.Tifrunner.gnm1.ann1.VZW0IR Arachis hypogaea HOM05D003867 ORTHO05D004593 2.2e-261 905.2 483 89.9
Oeu019042.1 Olea europaea HOM05D003867 ORTHO05D004593 2.2e-261 905.2 487 89.9
Ca_12000_v3 Cicer arietinum L. HOM05D003867 ORTHO05D004593 2.8e-261 904.8 482 89.6
Peaxi162Scf00128g01017 Petunia axillaris HOM05D003867 ORTHO05D004593 2.8e-261 904.8 485 89.1
Thhalv10013394m.g Eutrema salsugineum HOM05D003867 ORTHO05D004593 3.7e-261 904.4 486 90.5
HanXRQChr09g0255191 Helianthus annuus HOM05D003867 ORTHO05D004593 3.7e-261 904.4 480 90.2
Peaxi162Scf00449g00825 Petunia axillaris HOM05D003867 ORTHO05D004593 3.7e-261 904.4 480 89.6
Nitab4.5_0000271g0190 Nicotiana tabacum HOM05D003867 ORTHO05D004593 4.8e-261 904.0 485 88.5
Lalb_Chr03g0037281 Lupinus albus HOM05D003867 ORTHO05D004593 6.3e-261 903.7 483 89.4
TWI75G1178 Tripterygium wilfordii HOM05D003867 ORTHO05D004593 6.3e-261 903.7 486 87.9
MSTRG.7988 Avicennia marina HOM05D003867 ORTHO05D004593 8.3e-261 903.3 487 89.7
ECA232G3717 Erigeron canadensis HOM05D003867 ORTHO05D004593 1.1e-260 902.9 483 89.2
Lalb_Chr01g0021001 Lupinus albus HOM05D003867 ORTHO05D004593 1.4e-260 902.5 483 89.2
ATR0665G595 Amborella trichopoda HOM05D003867 ORTHO05D004593 1.8e-260 902.1 485 89.7
ClCG02G006860 Citrullus lanatus HOM05D003867 ORTHO05D004593 2.4e-260 901.7 486 88.9
PGR119G1061 Punica granatum HOM05D003867 ORTHO05D004593 2.4e-260 901.7 491 88.8
CARHR204460 Cardamine hirsuta HOM05D003867 ORTHO05D004593 3.1e-260 901.4 486 89.9
Ah.03g133960 Amaranthus hybridus HOM05D003867 ORTHO05D004593 4.1e-260 901.0 481 90.6
Lj6g0022289 Lotus japonicus HOM05D003867 ORTHO05D004593 4.1e-260 901.0 482 90.2
Medtr1g042300 Medicago truncatula HOM05D003867 ORTHO05D004593 4.1e-260 901.0 482 89.2
Aa31LG3G18010 Aethionema arabicum HOM05D003867 ORTHO05D004593 7.0e-260 900.2 486 89.5
A10p28200 Brassica napus HOM05D003867 ORTHO05D004593 9.1e-260 899.8 486 89.9
Lsat_1_v5_gn_4_184020 Lactuca sativa HOM05D003867 ORTHO05D004593 9.1e-260 899.8 485 89.7
Zm00001eb110430 Zea mays HOM05D003867 ORTHO05D004593 9.1e-260 899.8 460 95.4
Carub.0006s0748 Capsella rubella HOM05D003867 ORTHO05D004593 1.6e-259 899.0 486 89.7
Rhsim12G0103900 Rhododendron simsii HOM05D003867 ORTHO05D004593 1.6e-259 899.0 472 90.9
EL10Ac6g13463 Beta vulgaris HOM05D003867 ORTHO05D004593 2.0e-259 898.7 482 90.2
CAN.G206.61 Capsicum annuum HOM05D003867 ORTHO05D004593 2.0e-259 898.7 485 89.1
HanXRQChr15g0486841 Helianthus annuus HOM05D003867 ORTHO05D004593 2.0e-259 898.7 480 90.0
TPR.G25178 Trifolium pratense HOM05D003867 ORTHO05D004593 2.0e-259 898.7 482 88.6
Sabra10G0047900 Salix brachista HOM05D003867 ORTHO05D004593 2.7e-259 898.3 484 88.8
AT5G08530 Arabidopsis thaliana HOM05D003867 ORTHO05D004593 3.5e-259 897.9 486 89.7
BraA10t44869Z Brassica rapa HOM05D003867 ORTHO05D004593 4.5e-259 897.5 484 90.1
Zm00001eb329270 Zea mays HOM05D003867 ORTHO05D004593 4.5e-259 897.5 460 95.0
BolC9t59588H Brassica oleracea HOM05D003867 ORTHO05D004593 5.9e-259 897.1 484 90.1
SGA_v2.0_scaffold63G21760 Striga asiatica HOM05D003867 ORTHO05D004593 5.9e-259 897.1 487 89.1
BcaB08g37249 Brassica carinata HOM05D003867 ORTHO05D004593 7.7e-259 896.7 486 90.3
Os07g0645400 Oryza sativa ssp. japonica HOM05D003867 ORTHO05D004593 7.7e-259 896.7 462 94.6
C03p04400 Brassica napus HOM05D003867 ORTHO05D004593 1.0e-258 896.3 486 89.7
AL6G19230 Arabidopsis lyrata HOM05D003867 ORTHO05D004593 1.3e-258 896.0 486 89.7
SGA_v2.0_scaffold347G49568 Striga asiatica HOM05D003867 ORTHO05D004593 1.3e-258 896.0 487 88.9
Sp6g34370 Schrenkiella parvula HOM05D003867 ORTHO05D004593 1.7e-258 895.6 486 89.5
C09p68410 Brassica napus HOM05D003867 ORTHO05D004593 2.9e-258 894.8 488 89.5
Psat6g040120 Pisum sativum HOM05D003867 ORTHO05D004593 8.6e-258 893.3 482 88.4
A03p03890 Brassica napus HOM05D003867 ORTHO05D004593 1.5e-257 892.5 487 88.7
BcaB01g05588 Brassica carinata HOM05D003867 ORTHO05D004593 1.9e-257 892.1 486 89.1
Glyma.10G005500 Glycine max HOM05D003867 ORTHO05D004593 4.2e-257 891.0 478 88.7
THA.LOC104818400 Tarenaya hassleriana HOM05D003867 ORTHO05D004593 4.2e-257 891.0 488 88.9
BolC3t12971H Brassica oleracea HOM05D003867 ORTHO05D004593 5.5e-257 890.6 459 93.7
Phvul.007G274700 Phaseolus vulgaris HOM05D003867 ORTHO05D004593 9.5e-257 889.8 474 90.7
BraA03t09737Z Brassica rapa HOM05D003867 ORTHO05D004593 2.1e-256 888.6 462 93.1
Eucgr.H04659 Eucalyptus grandis HOM05D003867 ORTHO05D004593 2.8e-256 888.3 460 93.0
Glyma.02G003300 Glycine max HOM05D003867 ORTHO05D004593 2.8e-256 888.3 478 88.5
VMungo0720G1468 Vigna mungo HOM05D003867 ORTHO05D004593 4.7e-256 887.5 487 89.3
Sc04g0010000 Simmondsia chinensis HOM05D003867 ORTHO05D004593 8.0e-256 886.7 465 92.3
Ciclev10033600m.g Citrus clementina HOM05D003867 ORTHO05D004593 1.5e-254 882.5 436 94.0
SEGI_02035 Sequoiadendron giganteum HOM05D003867 ORTHO05D004593 1.4e-252 875.9 483 88.2
CDE02G4050 Ceratophyllum demersum HOM05D003867 ORTHO05D004593 8.6e-250 866.7 490 88.4
Cc11_g16710 Coffea canephora HOM05D003867 ORTHO05D004593 1.5e-249 865.9 460 90.4
Pp3c12_4050 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.0e-247 859.8 485 87.2
SMO141G0212 Selaginella moellendorffii HOM05D003867 ORTHO05D004593 1.4e-247 859.4 438 91.6
Pp3c4_17990 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.8e-247 859.0 438 92.5
AagrBONN_evm.TU.Sc2ySwM_117.2067 Anthoceros agrestis HOM05D003867 ORTHO05D004593 3.7e-245 851.3 437 91.1
Mapoly0052s0094 Marchantia polymorpha HOM05D003867 ORTHO05D004593 5.4e-244 847.4 477 86.4
HanXRQChr15g0475281 Helianthus annuus HOM05D003867 ORTHO05D004593 2.0e-243 845.5 434 90.1
CBR_g4558 Chara braunii HOM05D003867 ORTHO05D004593 5.0e-242 840.9 432 90.0
CiPaw.06G100100 Carya illinoinensis HOM05D003867 ORTHO05D004593 3.1e-239 831.6 407 95.1
arahy.Tifrunner.gnm1.ann1.IM3BGM Arachis hypogaea HOM05D003867 ORTHO05D004593 4.4e-238 827.8 407 94.6
Lsat_1_v5_gn_0_47760 Lactuca sativa HOM05D003867 ORTHO05D004593 5.8e-238 827.4 431 88.4
AUR62024144 Chenopodium quinoa HOM05D003867 ORTHO05D004593 6.4e-237 823.9 405 95.1
AUR62005586 Chenopodium quinoa HOM05D003867 ORTHO05D004593 1.9e-236 822.4 404 95.0
unitig_21.g20878 Utricularia gibba HOM05D003867 ORTHO05D004593 1.6e-235 819.3 408 93.4
MCO16G634 Micromonas commoda HOM05D003867 ORTHO05D004593 1.7e-229 799.3 429 86.2
Dinv37748 Davidia involucrata HOM05D003867 ORTHO05D004593 3.0e-226 788.5 385 96.1
CBR_g30767 Chara braunii HOM05D003867 ORTHO05D004593 1.2e-222 776.5 421 83.6
Cre10.g422600 Chlamydomonas reinhardtii HOM05D003867 ORTHO05D004593 1.7e-218 762.7 435 81.4
PRCOL_00003927 Prasinoderma coloniale HOM05D003867 ORTHO05D004593 1.7e-218 762.7 427 81.7
Dinv39063 Davidia involucrata HOM05D003867 ORTHO05D004593 1.4e-212 743.0 409 87.5
Sed0024813 Sechium edule HOM05D003867 ORTHO05D004593 3.1e-207 725.3 479 77.0
Actinidia08082 Actinidia chinensis HOM05D003867 ORTHO05D004593 1.3e-205 719.9 393 88.8
Nn7g37842 Nelumbo nucifera HOM05D003867 ORTHO05D004593 8.2e-192 674.1 346 91.6
SGA_v2.0_scaffold1484G53963 Striga asiatica HOM05D003867 ORTHO05D004593 1.5e-190 669.8 369 88.3
Haze_26697 Corylus avellana HOM05D003867 ORTHO05D004593 2.8e-184 649.0 393 75.1
HPP92_000985 Vanilla planifolia HOM05D003867 ORTHO05D004593 2.2e-181 639.4 316 95.3
FAN17G1814 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.2e-180 635.2 486 68.9
FAN12G0392 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.6e-171 605.5 486 66.9
FAN22G0799 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.4e-170 603.6 486 66.7
FAN07G1251 Fragaria x ananassa HOM05D003867 ORTHO05D004593 2.2e-168 596.3 486 66.3
unitig_744.g24299 Utricularia gibba HOM05D003867 ORTHO05D004593 7.0e-167 591.3 331 88.2
Nn3g20865 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.3e-149 533.9 279 90.0
Actinidia20690 Actinidia chinensis HOM05D003867 ORTHO05D004593 9.1e-143 511.1 382 69.4
Haze_26928 Corylus avellana HOM05D003867 ORTHO05D004593 1.0e-125 454.5 293 72.0
TAR629G2520 Trochodendron aralioides HOM05D003867 ORTHO05D004593 2.1e-115 420.2 203 97.0
Actinidia09668 Actinidia chinensis HOM05D003867 ORTHO05D004593 2.4e-98 363.6 222 79.7
Aqoxy3G01811 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 2.0e-97 360.5 177 92.1
TAR629G2231 Trochodendron aralioides HOM05D003867 ORTHO05D004593 6.0e-94 349.0 173 94.2
CSS0023173 Camellia sinensis var. sinensis HOM05D003867 ORTHO05D004593 5.6e-92 342.4 170 92.9
Nitab4.5_0000581g0020 Nicotiana tabacum HOM05D003867 ORTHO05D004593 4.0e-82 309.7 485 40.6
Atru.chr11.2286 Acer truncatum HOM05D003867 ORTHO05D004593 6.7e-77 292.4 146 92.5
Lj6P823T18 Lonicera japonica HOM05D003867 ORTHO05D004593 1.8e-69 267.7 146 87.0
HPP92_000984 Vanilla planifolia HOM05D003867 ORTHO05D004593 7.4e-68 262.3 165 83.6
unitig_744.g24298 Utricularia gibba HOM05D003867 ORTHO05D004593 2.9e-64 250.4 128 91.4
MD16G1114900 Malus domestica HOM05D003867 ORTHO05D004593 6.5e-64 249.2 127 89.8
GSVIVG01020401001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.5e-60 238.0 147 85.0
Aqoxy84s003 Aquilegia oxysepala HOM05D003867 ORTHO05D004593 5.0e-56 223.0 259 45.6
MD16G1114800 Malus domestica HOM05D003867 ORTHO05D004593 9.7e-52 208.8 100 95.0
Nn8g40622 Nelumbo nucifera HOM05D003867 ORTHO05D004593 3.1e-50 203.8 102 93.1
Actinidia09669 Actinidia chinensis HOM05D003867 ORTHO05D004593 3.6e-46 190.3 127 75.6
BcaC03g13233 Brassica carinata HOM05D003155 ORTHO05D012487 3.7e-35 153.7 102 73.5
C02p03650 Brassica napus HOM05D003867 ORTHO05D004593 3.1e-34 150.6 76 90.8
BolC2t06324H Brassica oleracea HOM05D003867 ORTHO05D004593 3.1e-34 150.6 76 90.8
Potri.008G177801 Populus trichocarpa HOM05D003867 ORTHO05D004593 9.5e-31 139.0 108 63.0
BcaC03g13232 Brassica carinata HOM05D003867 ORTHO05D004593 2.0e-28 131.3 68 91.2
Duzib128G1406 Durio zibethinus HOM05D003867 ORTHO05D004593 2.6e-28 131.0 196 37.2
FAN03G1235 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.4e-28 130.6 70 85.7
FAN15G0422 Fragaria x ananassa HOM05D003867 ORTHO05D004593 1.1e-26 125.6 69 82.6
Nn1g01167 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.8e-26 124.8 65 87.7
Nn1g01168 Nelumbo nucifera HOM05D003867 ORTHO05D004593 1.8e-26 124.8 65 87.7
FAN07G1961 Fragaria x ananassa HOM05D003867 ORTHO05D004593 3.5e-25 120.6 65 84.6
FAN08G0425 Fragaria x ananassa HOM05D003867 ORTHO05D004593 4.5e-25 120.2 65 84.6
GSVIVG01013345001 Vitis vinifera HOM05D003867 ORTHO05D004593 1.0e-21 109.0 67 71.6
Pp3c3_8640 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.8e-21 108.2 65 78.5
Atru.chr11.2285 Acer truncatum HOM05D003867 ORTHO05D004593 3.0e-21 107.5 67 73.1
Pp3c13_10840 Physcomitrium patens HOM05D003867 ORTHO05D004593 1.2e-17 95.5 48 91.7
Hund25436 Selenicereus undatus HOM05D000424 ORTHO05D008586 2.5e-15 87.8 168 35.7
FvH4_1g23805 Fragaria vesca HOM05D000280 ORTHO05D000632 1.8e-13 81.6 71 59.2
FvH4_3g23161 Fragaria vesca HOM05D011771 ORTHO05D014214 5.2e-13 80.1 72 58.3
FvH4_3g31747 Fragaria vesca HOM05D011771 ORTHO05D014214 1.2e-12 79.0 72 58.3
FvH4_7g28392 Fragaria vesca HOM05D003867 ORTHO05D196806 9.2e-10 69.3 61 59.0


User provided reference genes

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