Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0708 Ceratophyllum demersum HOM05D005133 ORTHO05D006685 1.9e-154 549.3 300 100.0
Potri.014G091400 Populus trichocarpa HOM05D005133 ORTHO05D006685 2.8e-70 269.6 322 53.4
TAR375G0148 Trochodendron aralioides HOM05D005133 ORTHO05D006685 3.7e-70 269.2 320 52.8
Cpa.g.sc11.53 Carica papaya HOM05D005133 ORTHO05D006685 1.2e-68 264.2 323 50.5
Manes.01G251600 Manihot esculenta HOM05D005133 ORTHO05D006685 1.6e-68 263.8 316 51.9
Dinv43872 Davidia involucrata HOM05D005133 ORTHO05D006685 3.5e-68 262.7 320 51.9
Nitab4.5_0003501g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 1.3e-67 260.8 320 50.6
GSVIVG01027010001 Vitis vinifera HOM05D005133 ORTHO05D006685 1.3e-67 260.8 327 51.4
Gohir.D07G145800 Gossypium hirsutum HOM05D005133 ORTHO05D006685 3.8e-67 259.2 327 52.3
Gorai.001G158000 Gossypium raimondii HOM05D005133 ORTHO05D006685 3.8e-67 259.2 327 52.3
CiPaw.02G036200 Carya illinoinensis HOM05D005133 ORTHO05D006685 5.0e-67 258.8 318 49.7
Thecc.01G351000 Theobroma cacao HOM05D005133 ORTHO05D006685 5.0e-67 258.8 322 51.2
CSS0009332 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 1.5e-66 257.3 323 52.9
Peaxi162Scf00020g01713 Petunia axillaris HOM05D005133 ORTHO05D006685 1.5e-66 257.3 324 50.6
Aqoxy3G00498 Aquilegia oxysepala HOM05D005133 ORTHO05D006685 5.5e-66 255.4 318 52.5
COL.COLO4_06373 Corchorus olitorius HOM05D005133 ORTHO05D006685 7.2e-66 255.0 324 50.6
Duzib133G0222 Durio zibethinus HOM05D005133 ORTHO05D006685 1.6e-65 253.8 320 50.3
Actinidia20170 Actinidia chinensis HOM05D005133 ORTHO05D006685 2.7e-65 253.1 320 50.0
arahy.Tifrunner.gnm1.ann1.ZNWN3Y Arachis hypogaea HOM05D005133 ORTHO05D006685 2.7e-65 253.1 318 50.0
PGSC0003DMG401000198 Solanum tuberosum HOM05D005133 ORTHO05D006685 3.6e-65 252.7 321 50.5
Dinv32531 Davidia involucrata HOM05D005133 ORTHO05D006685 4.7e-65 252.3 320 51.2
Lj7C506T5 Lonicera japonica HOM05D005133 ORTHO05D006685 6.1e-65 251.9 318 50.3
Solyc01g095230.4 Solanum lycopersicum HOM05D005133 ORTHO05D006685 8.0e-65 251.5 321 50.8
arahy.Tifrunner.gnm1.ann1.YZ0HQS Arachis hypogaea HOM05D005133 ORTHO05D006685 1.0e-64 251.1 318 49.7
QL07p038619 Quercus lobata HOM05D005133 ORTHO05D006685 1.0e-64 251.1 320 49.1
Sopen01g039020 Solanum pennellii HOM05D005133 ORTHO05D006685 1.0e-64 251.1 321 50.5
arahy.Tifrunner.gnm1.ann1.JRPH7J Arachis hypogaea HOM05D005133 ORTHO05D006685 1.8e-64 250.4 318 49.4
Atru.chr5.593 Acer truncatum HOM05D005133 ORTHO05D006685 2.3e-64 250.0 322 49.1
Rhsim07G0009300 Rhododendron simsii HOM05D005133 ORTHO05D006685 6.8e-64 248.4 323 50.5
Cc06_g17440 Coffea canephora HOM05D005133 ORTHO05D006685 8.8e-64 248.1 316 49.7
Lalb_Chr19g0138411 Lupinus albus HOM05D005133 ORTHO05D006685 1.2e-63 247.7 321 49.8
Glyma.12G050200 Glycine max HOM05D005133 ORTHO05D006685 1.5e-63 247.3 318 49.1
MD07G1130200 Malus domestica HOM05D005133 ORTHO05D006685 1.5e-63 247.3 320 48.1
DCAR_025229 Daucus carota HOM05D005133 ORTHO05D006685 2.6e-63 246.5 317 49.2
ATR0626G352 Amborella trichopoda HOM05D005133 ORTHO05D006685 3.4e-63 246.1 322 50.0
CSS0040148 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 3.4e-63 246.1 320 49.7
RcHm_v2.0_Chr1g0358181 Rosa chinensis HOM05D005133 ORTHO05D006685 4.4e-63 245.7 331 48.0
MSTRG.20869 Avicennia marina HOM05D005133 ORTHO05D006685 5.7e-63 245.4 313 50.5
HanXRQChr17g0562291 Helianthus annuus HOM05D005133 ORTHO05D006685 1.3e-62 244.2 320 47.2
Cfa007878 Carpinus fangiana HOM05D005133 ORTHO05D006685 2.2e-62 243.4 322 48.1
LjContig00310g0005517 Lotus japonicus HOM05D005133 ORTHO05D006685 2.2e-62 243.4 319 48.3
Phvul.011G052300 Phaseolus vulgaris HOM05D005133 ORTHO05D006685 2.8e-62 243.0 318 48.7
VMungo1127G1104 Vigna mungo HOM05D005133 ORTHO05D006685 2.8e-62 243.0 325 48.3
Nn7g37315 Nelumbo nucifera HOM05D005133 ORTHO05D006685 3.7e-62 242.7 323 48.6
Prupe.2G179100 Prunus persica HOM05D005133 ORTHO05D006685 3.7e-62 242.7 318 49.1
TPR.G34211 Trifolium pratense HOM05D005133 ORTHO05D006685 3.7e-62 242.7 319 47.6
SalBow1G3823 Salvia bowleyana HOM05D005133 ORTHO05D006685 4.9e-62 242.3 322 49.4
Migut.B01807 Erythranthe guttata HOM05D005133 ORTHO05D006685 8.3e-62 241.5 323 49.5
Migut.H02011 Erythranthe guttata HOM05D005133 ORTHO05D006685 7.0e-61 238.4 322 48.8
Psat7g208960 Pisum sativum HOM05D005133 ORTHO05D006685 9.2e-61 238.0 317 47.6
Ca_20805_v3 Cicer arietinum L. HOM05D005133 ORTHO05D006685 1.2e-60 237.7 324 48.1
Ciclev10020434m.g Citrus clementina HOM05D005133 ORTHO05D006685 1.6e-60 237.3 327 48.3
Haze_14198 Corylus avellana HOM05D005133 ORTHO05D006685 1.6e-60 237.3 321 48.0
CSS0000155 Camellia sinensis var. sinensis HOM05D005133 ORTHO05D006685 2.0e-60 236.9 312 51.9
PSO135G0656 Papaver somniferum HOM05D005133 ORTHO05D006685 3.5e-60 236.1 318 49.4
Sabra14G0066300 Salix brachista HOM05D005133 ORTHO05D006685 3.5e-60 236.1 365 46.0
SalBow3G2243 Salvia bowleyana HOM05D005133 ORTHO05D006685 3.5e-60 236.1 350 46.0
Migut.B01808 Erythranthe guttata HOM05D005133 ORTHO05D006685 7.7e-60 235.0 322 48.4
PGR031G0061 Punica granatum HOM05D005133 ORTHO05D006685 1.0e-59 234.6 314 47.8
ClCG05G014200 Citrullus lanatus HOM05D005133 ORTHO05D006685 2.3e-59 233.4 326 48.5
SGA_v2.0_scaffold95G28800 Striga asiatica HOM05D003721 ORTHO05D004303 2.3e-59 233.4 318 49.7
unitig_0.g335 Utricularia gibba HOM05D005133 ORTHO05D006685 2.9e-59 233.0 316 46.5
Cfa003860 Carpinus fangiana HOM05D005133 ORTHO05D006685 8.6e-59 231.5 322 46.9
Sed0023612 Sechium edule HOM05D005133 ORTHO05D006685 1.1e-58 231.1 323 47.1
TWI34G1432 Tripterygium wilfordii HOM05D005133 ORTHO05D006685 1.9e-58 230.3 321 47.0
Os01g0226500 Oryza sativa ssp. japonica HOM05D005133 ORTHO05D006685 7.3e-58 228.4 327 45.3
CsaV3_3G008530 Cucumis sativus L. HOM05D005133 ORTHO05D006685 4.7e-57 225.7 328 48.5
FvH4_7g15540 Fragaria vesca HOM05D005133 ORTHO05D006685 1.8e-56 223.8 318 44.3
FAN06G1776 Fragaria x ananassa HOM05D005133 ORTHO05D006685 4.0e-56 222.6 318 44.3
FAN10G2939 Fragaria x ananassa HOM05D005133 ORTHO05D006685 4.0e-56 222.6 333 45.0
Nitab4.5_0000915g0010 Nicotiana tabacum HOM05D005133 ORTHO05D006685 8.9e-56 221.5 291 49.1
FAN10G2725 Fragaria x ananassa HOM05D005133 ORTHO05D006685 2.6e-55 219.9 332 44.6
Zm00001eb339090 Zea mays HOM05D005133 ORTHO05D006685 4.4e-55 219.2 320 45.9
ECA234G4221 Erigeron canadensis HOM05D005133 ORTHO05D006685 3.7e-54 216.1 321 46.7
MELO3C006074.2 Cucumis melo HOM05D005133 ORTHO05D006685 6.4e-54 215.3 339 45.4
EL10Ac1g00344 Beta vulgaris HOM05D005133 ORTHO05D006685 3.2e-53 213.0 316 45.3
vmacro20884 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 4.1e-53 212.6 345 45.8
Sc01g0003150 Simmondsia chinensis HOM05D005133 ORTHO05D006685 2.7e-52 209.9 317 46.7
FAN06G1340 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.3e-51 207.6 328 41.8
Lsat_1_v5_gn_4_34900 Lactuca sativa HOM05D005133 ORTHO05D006685 1.7e-51 207.2 317 43.5
CANSAT01G0674 Cannabis sativa HOM05D005133 ORTHO05D006685 2.3e-51 206.8 291 48.8
Medtr4g068010 Medicago truncatula HOM05D005133 ORTHO05D006685 5.0e-51 205.7 320 42.5
Aa31LG1G27580 Aethionema arabicum HOM05D005133 ORTHO05D006685 1.5e-50 204.1 320 41.2
Gohir.A07G140500 Gossypium hirsutum HOM05D005133 ORTHO05D006685 1.5e-50 204.1 286 50.3
AUR62022626 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.5e-50 203.4 309 44.0
BraA05t19159Z Brassica rapa HOM05D005133 ORTHO05D006685 4.3e-50 202.6 318 40.9
Hund27238 Selenicereus undatus HOM05D005133 ORTHO05D006685 7.3e-50 201.8 332 42.8
Eucgr.J01063 Eucalyptus grandis HOM05D005133 ORTHO05D006685 1.2e-49 201.1 332 41.9
A05p01630 Brassica napus HOM05D005133 ORTHO05D006685 1.6e-49 200.7 318 40.9
AUR62004420 Chenopodium quinoa HOM05D005133 ORTHO05D006685 2.1e-49 200.3 289 47.8
CAN.G78.137 Capsicum annuum HOM05D005133 ORTHO05D006685 2.8e-49 199.9 318 44.0
AL4G45460 Arabidopsis lyrata HOM05D005133 ORTHO05D006685 8.0e-49 198.4 317 42.9
Haze_15576 Corylus avellana HOM05D005133 ORTHO05D006685 2.3e-48 196.8 321 40.8
Sp5g32810 Schrenkiella parvula HOM05D005133 ORTHO05D006685 4.0e-48 196.1 313 41.9
BcaC02g12500 Brassica carinata HOM05D005133 ORTHO05D006685 8.9e-48 194.9 322 38.8
BcaC02g12707 Brassica carinata HOM05D005133 ORTHO05D006685 8.9e-48 194.9 317 40.7
C04p01840 Brassica napus HOM05D005133 ORTHO05D006685 8.9e-48 194.9 322 38.5
Oeu015214.1 Olea europaea HOM05D005133 ORTHO05D006685 4.4e-47 192.6 418 36.8
MBI16_g41624_MAGBIO Magnolia biondii HOM05D005133 ORTHO05D006685 2.2e-46 190.3 297 45.1
THA.LOC104817324 Tarenaya hassleriana HOM05D005133 ORTHO05D006685 8.3e-46 188.3 316 42.4
Thhalv10001493m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 4.1e-45 186.0 322 40.1
Thhalv10028732m.g Eutrema salsugineum HOM05D005133 ORTHO05D006685 2.7e-44 183.3 317 38.5
CARHR141470 Cardamine hirsuta HOM05D005133 ORTHO05D006685 1.7e-43 180.6 316 39.6
RcHm_v2.0_Chr1g0358091 Rosa chinensis HOM05D005133 ORTHO05D006685 2.3e-43 180.3 304 41.8
Haze_15581 Corylus avellana HOM05D005133 ORTHO05D006685 5.0e-43 179.1 291 41.6
vmacro13220 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 3.3e-42 176.4 293 45.7
Carub.0004s2888 Capsella rubella HOM05D005133 ORTHO05D006685 1.1e-40 171.4 316 38.0
vmacro22850 Vaccinium macrocarpon HOM05D005133 ORTHO05D006685 5.2e-40 169.1 291 45.4
RcHm_v2.0_Chr1g0357891 Rosa chinensis HOM05D005133 ORTHO05D006685 1.2e-39 167.9 282 42.9
Ah.05g180080 Amaranthus hybridus HOM05D005133 ORTHO05D006685 2.0e-39 167.2 288 42.0
Pp3c4_26280 Physcomitrium patens HOM05D005133 ORTHO05D006685 2.6e-39 166.8 318 38.4
AT2G46200 Arabidopsis thaliana HOM05D005133 ORTHO05D006685 7.8e-36 155.2 275 41.8
PSO478G1127 Papaver somniferum HOM05D005133 ORTHO05D006685 3.0e-35 153.3 251 45.4
HPP92_023966 Vanilla planifolia HOM05D005133 ORTHO05D006685 1.9e-34 150.6 247 42.5
RcHm_v2.0_Chr1g0358051 Rosa chinensis HOM05D005133 ORTHO05D006685 4.0e-32 142.9 331 35.6
Mapoly0001s0322 Marchantia polymorpha HOM05D005133 ORTHO05D006685 2.2e-30 137.1 326 34.7
AagrBONN_evm.TU.Sc2ySwM_344.4499 Anthoceros agrestis HOM05D005133 ORTHO05D006685 1.1e-21 108.2 310 33.2
PSO384G2230 Papaver somniferum HOM05D005133 ORTHO05D006685 2.4e-21 107.1 150 48.7
SMO239G0112 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 3.9e-19 99.8 250 33.6
FAN03G0151 Fragaria x ananassa HOM05D005133 ORTHO05D006685 1.9e-18 97.4 68 63.2
CBR_g45167 Chara braunii HOM05D005133 ORTHO05D006685 2.1e-17 94.0 292 29.1
Rhsim01G0168000 Rhododendron simsii HOM05D005133 ORTHO05D006685 1.5e-15 87.8 71 74.6
SMO117G0103 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 5.8e-15 85.9 170 38.2
Zm00001eb201120 Zea mays HOM05D005133 ORTHO05D006685 4.9e-14 82.8 152 39.5
Zm00001eb407270 Zea mays HOM05D005133 ORTHO05D006685 4.9e-14 82.8 152 39.5
arahy.Tifrunner.gnm1.ann1.Z00T6Z Arachis hypogaea HOM05D005133 ORTHO05D006685 1.1e-10 71.6 130 38.5
SMO114G0022 Selaginella moellendorffii HOM05D005133 ORTHO05D006685 2.6e-07 60.5 48 62.5


User provided reference genes

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