Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 9.7e-135 483.4 232 100.0
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 2.7e-113 412.1 203 95.1
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 6.6e-91 337.8 229 70.7
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 5.7e-87 324.7 208 72.6
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 9.8e-87 323.9 214 71.5
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 1.4e-85 320.1 213 70.4
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 2.3e-83 312.8 219 66.7
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 2.3e-83 312.8 220 66.4
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 5.0e-83 311.6 219 68.5
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 1.1e-82 310.5 214 68.7
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.5e-82 310.1 221 65.6
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.5e-82 310.1 221 65.6
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 1.9e-82 309.7 222 64.9
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 3.3e-82 308.9 223 63.2
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 4.3e-82 308.5 203 70.4
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 7.3e-82 307.8 221 66.1
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 7.3e-82 307.8 207 68.6
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 8.0e-81 304.3 208 65.9
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 1.8e-80 303.1 208 64.9
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 2.3e-80 302.8 220 65.0
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.3e-80 302.8 212 68.4
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 2.3e-80 302.8 222 64.9
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 2.3e-80 302.8 216 65.7
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 4.0e-80 302.0 208 68.3
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 4.0e-80 302.0 211 66.4
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 4.0e-80 302.0 204 69.1
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 5.2e-80 301.6 220 63.6
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 5.2e-80 301.6 205 67.8
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 6.8e-80 301.2 209 68.4
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 6.8e-80 301.2 215 66.0
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 8.9e-80 300.8 208 65.4
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 8.9e-80 300.8 237 62.9
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 1.5e-79 300.1 210 68.1
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 1.5e-79 300.1 207 65.2
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 2.0e-79 299.7 208 66.3
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 2.6e-79 299.3 209 67.0
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 2.6e-79 299.3 207 67.1
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 2.6e-79 299.3 203 67.5
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 2.6e-79 299.3 209 67.5
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 2.6e-79 299.3 212 66.0
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 3.4e-79 298.9 209 66.0
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.4e-79 298.9 227 60.8
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 3.4e-79 298.9 206 68.9
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 7.5e-79 297.7 198 70.2
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 9.8e-79 297.4 212 67.5
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 9.8e-79 297.4 220 64.5
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 2.2e-78 296.2 202 67.3
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 2.2e-78 296.2 217 65.4
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 2.2e-78 296.2 208 66.3
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 8.3e-78 294.3 215 62.3
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 8.3e-78 294.3 198 69.2
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 8.3e-78 294.3 214 63.1
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.1e-77 293.9 198 69.2
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 1.1e-77 293.9 207 67.1
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.1e-77 293.9 214 63.1
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 1.1e-77 293.9 205 66.3
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 1.1e-77 293.9 208 65.9
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 2.4e-77 292.7 202 67.3
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 3.2e-77 292.4 231 59.3
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 3.2e-77 292.4 204 65.7
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 3.2e-77 292.4 174 75.9
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 4.1e-77 292.0 212 64.6
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 4.1e-77 292.0 205 66.8
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 4.1e-77 292.0 201 66.2
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 7.0e-77 291.2 198 69.2
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 7.0e-77 291.2 221 63.3
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 9.2e-77 290.8 213 64.3
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 9.2e-77 290.8 227 61.2
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 2.0e-76 289.7 213 62.9
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 3.5e-76 288.9 200 66.0
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 4.6e-76 288.5 207 64.7
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.0e-76 288.1 207 65.2
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 7.8e-76 287.7 200 67.0
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.0e-75 287.3 197 66.5
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 1.7e-75 286.6 200 66.5
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 3.0e-75 285.8 180 73.3
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.5e-74 283.5 195 67.7
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 4.3e-74 282.0 227 60.4
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 8.1e-73 277.7 168 73.8
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 4.9e-70 268.5 169 73.4
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 5.4e-69 265.0 166 71.7
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 7.8e-68 261.2 203 64.0
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 5.1e-67 258.5 168 70.2
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 5.1e-67 258.5 171 69.0
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 4.3e-66 255.4 177 67.8
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 4.3e-66 255.4 192 61.5
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 5.2e-64 248.4 201 56.7
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 7.6e-63 244.6 209 54.5
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 1.7e-62 243.4 192 56.2
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 2.4e-61 239.6 193 56.0
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 3.2e-61 239.2 143 75.5
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 1.0e-59 234.2 133 78.2
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 3.9e-59 232.3 150 72.7
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 3.3e-58 229.2 147 70.1
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 2.1e-57 226.5 168 64.3
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 8.1e-57 224.6 165 65.5
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 4.0e-48 195.7 199 49.2
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 4.5e-47 192.2 116 75.0
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 4.3e-42 175.6 121 66.1
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 1.8e-40 170.2 210 43.3
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.0e-40 169.1 215 46.0
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 2.6e-39 166.4 213 42.7
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 2.1e-36 156.8 102 67.6
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 5.8e-31 138.7 95 63.2
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 5.8e-31 138.7 81 76.5
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 2.6e-23 113.2 94 55.3
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 6.5e-22 108.6 90 57.8
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 1.3e-17 94.4 54 77.8
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 6.3e-17 92.0 53 77.4
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 6.9e-16 88.6 91 49.5
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 4.5e-15 85.9 54 68.5
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 1.3e-14 84.3 65 60.0
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 3.8e-14 82.8 68 55.9
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.3e-11 73.6 67 47.8
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 5.7e-10 68.9 91 41.8
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 5.7e-10 68.9 91 41.8
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 5.7e-10 68.9 91 41.8
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 5.7e-10 68.9 91 41.8
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.7e-09 67.4 90 41.1
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 4.5e-07 59.3 54 51.9
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 2.9e-06 56.6 33 72.7


User provided reference genes

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