Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0622 Ceratophyllum demersum HOM05D007035 ORTHO05D008774 2.3e-119 432.2 206 100.0
CiPaw.07G005600 Carya illinoinensis HOM05D007035 ORTHO05D008774 1.8e-79 299.7 206 68.0
TAR628G1604 Trochodendron aralioides HOM05D007035 ORTHO05D008774 3.0e-79 298.9 202 69.8
QL06p052348 Quercus lobata HOM05D007035 ORTHO05D008774 5.1e-79 298.1 207 67.1
Gohir.A02G175400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 6.7e-79 297.7 204 67.6
Cfa015701 Carpinus fangiana HOM05D007035 ORTHO05D008774 1.1e-78 297.0 208 67.8
Rhsim08G0078500 Rhododendron simsii HOM05D007035 ORTHO05D008774 1.5e-78 296.6 203 70.0
Gorai.003G004700 Gossypium raimondii HOM05D007035 ORTHO05D008774 1.9e-78 296.2 204 67.2
Actinidia17600 Actinidia chinensis HOM05D007035 ORTHO05D008774 2.5e-78 295.8 203 69.0
Thecc.01G009700 Theobroma cacao HOM05D007035 ORTHO05D008774 4.3e-78 295.0 204 67.6
vmacro18445 Vaccinium macrocarpon HOM05D007035 ORTHO05D008774 9.7e-78 293.9 203 69.0
Nn6g31845 Nelumbo nucifera HOM05D007035 ORTHO05D008774 1.6e-77 293.1 202 68.3
Psat4g103040 Pisum sativum HOM05D007035 ORTHO05D008774 4.8e-77 291.6 208 65.9
Gohir.D03G004400 Gossypium hirsutum HOM05D007035 ORTHO05D008774 8.2e-77 290.8 204 65.7
Ca_03644_v3 Cicer arietinum L. HOM05D007035 ORTHO05D008774 4.1e-76 288.5 208 63.9
Manes.02G111400 Manihot esculenta HOM05D007035 ORTHO05D008774 5.3e-76 288.1 202 66.8
CSS0018213 Camellia sinensis var. sinensis HOM05D007035 ORTHO05D008774 6.9e-76 287.7 203 66.5
Atru.chr3.931 Acer truncatum HOM05D007035 ORTHO05D008774 1.2e-75 287.0 204 67.6
Ciclev10026505m.g Citrus clementina HOM05D007035 ORTHO05D008774 1.2e-75 287.0 203 65.5
Medtr8g074720 Medicago truncatula HOM05D007035 ORTHO05D008774 3.4e-75 285.4 208 63.9
Phvul.003G267600 Phaseolus vulgaris HOM05D007035 ORTHO05D008774 3.4e-75 285.4 208 63.5
Lj4g0012539 Lotus japonicus HOM05D007035 ORTHO05D008774 3.8e-74 282.0 208 62.5
Hma1.2p1_0315F.1_g122740 Hydrangea macrophylla HOM05D007035 ORTHO05D008774 5.0e-74 281.6 204 65.7
Potri.005G105500 Populus trichocarpa HOM05D007035 ORTHO05D008774 6.5e-74 281.2 202 64.9
PGR102G2581 Punica granatum HOM05D007035 ORTHO05D008774 8.5e-74 280.8 204 63.7
Eucgr.J02513 Eucalyptus grandis HOM05D007035 ORTHO05D008774 1.1e-73 280.4 206 63.6
Lsat_1_v5_gn_2_75101 Lactuca sativa HOM05D007035 ORTHO05D008774 1.4e-73 280.0 203 64.5
EL10Ac9g22991 Beta vulgaris HOM05D007035 ORTHO05D008774 1.9e-73 279.6 203 62.6
Lalb_Chr05g0229721 Lupinus albus HOM05D007035 ORTHO05D008774 3.2e-73 278.9 208 61.5
MD02G1242600 Malus domestica HOM05D007035 ORTHO05D008774 3.2e-73 278.9 208 62.5
Prupe.7G176600 Prunus persica HOM05D007035 ORTHO05D008774 3.2e-73 278.9 202 64.4
Sed0013381 Sechium edule HOM05D007035 ORTHO05D008774 7.2e-73 277.7 208 61.5
Ah.10g032510 Amaranthus hybridus HOM05D007035 ORTHO05D008774 9.3e-73 277.3 203 62.6
MBI05_g35104_MAGBIO Magnolia biondii HOM05D007035 ORTHO05D008774 9.3e-73 277.3 208 63.5
FvH4_1g10900 Fragaria vesca HOM05D007035 ORTHO05D008774 1.2e-72 276.9 202 64.4
TPR.G32013 Trifolium pratense HOM05D007035 ORTHO05D008774 1.2e-72 276.9 196 66.8
FAN26G0170 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.1e-72 276.2 202 64.4
FAN28G2890 Fragaria x ananassa HOM05D007035 ORTHO05D008774 2.1e-72 276.2 202 64.4
HanXRQChr07g0192541 Helianthus annuus HOM05D007035 ORTHO05D008774 2.7e-72 275.8 203 63.1
CsaV3_6G047600 Cucumis sativus L. HOM05D007035 ORTHO05D008774 3.6e-72 275.4 209 61.2
CANSAT25G1910 Cannabis sativa HOM05D007035 ORTHO05D008774 4.6e-72 275.0 208 63.9
FAN19G1923 Fragaria x ananassa HOM05D007035 ORTHO05D008774 4.6e-72 275.0 202 63.9
PSO541G4772 Papaver somniferum HOM05D007035 ORTHO05D008774 6.1e-72 274.6 205 65.4
ClCG01G020680 Citrullus lanatus HOM05D007035 ORTHO05D008774 7.9e-72 274.2 208 61.1
PSO675G7652 Papaver somniferum HOM05D007035 ORTHO05D008774 7.9e-72 274.2 205 64.9
AT2G17695 Arabidopsis thaliana HOM05D007035 ORTHO05D008774 1.0e-71 273.9 202 61.9
Nitab4.5_0001696g0080 Nicotiana tabacum HOM05D007035 ORTHO05D008774 1.0e-71 273.9 204 63.2
arahy.Tifrunner.gnm1.ann1.JN68AD Arachis hypogaea HOM05D007035 ORTHO05D008774 3.0e-71 272.3 207 60.9
arahy.Tifrunner.gnm1.ann1.Y2NACG Arachis hypogaea HOM05D007035 ORTHO05D008774 3.0e-71 272.3 207 60.9
TWI59G1021 Tripterygium wilfordii HOM05D007035 ORTHO05D008774 3.0e-71 272.3 204 63.7
A06p33710 Brassica napus HOM05D007035 ORTHO05D008774 3.9e-71 271.9 205 61.5
BraA06t26305Z Brassica rapa HOM05D007035 ORTHO05D008774 3.9e-71 271.9 207 60.9
Carub.0003s3179 Capsella rubella HOM05D007035 ORTHO05D008774 3.9e-71 271.9 202 61.4
DCAR_027629 Daucus carota HOM05D007035 ORTHO05D008774 3.9e-71 271.9 206 62.6
FAN23G2784 Fragaria x ananassa HOM05D007035 ORTHO05D008774 3.9e-71 271.9 202 63.9
PGSC0003DMG400001578 Solanum tuberosum HOM05D007035 ORTHO05D008774 3.9e-71 271.9 202 62.4
THA.LOC104807437 Tarenaya hassleriana HOM05D007035 ORTHO05D008774 5.1e-71 271.6 202 63.4
BcaB08g34751 Brassica carinata HOM05D007035 ORTHO05D008774 6.7e-71 271.2 207 60.9
MELO3C007951.2 Cucumis melo HOM05D007035 ORTHO05D008774 8.7e-71 270.8 208 61.1
Oeu008100.1 Olea europaea HOM05D007035 ORTHO05D008774 8.7e-71 270.8 203 63.5
C03p58600 Brassica napus HOM05D007035 ORTHO05D008774 1.1e-70 270.4 207 60.4
GSVIVG01006258001 Vitis vinifera HOM05D007035 ORTHO05D008774 1.1e-70 270.4 203 62.1
AL3G50680 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 1.9e-70 269.6 202 60.9
Solyc02g083180.4 Solanum lycopersicum HOM05D007035 ORTHO05D008774 1.9e-70 269.6 202 61.9
Sopen02g027940 Solanum pennellii HOM05D007035 ORTHO05D008774 1.9e-70 269.6 202 61.9
CAN.G890.13 Capsicum annuum HOM05D007035 ORTHO05D008774 5.7e-70 268.1 204 63.7
Sp3g31080 Schrenkiella parvula HOM05D007035 ORTHO05D008774 5.7e-70 268.1 202 61.4
BcaC01g02899 Brassica carinata HOM05D007035 ORTHO05D008774 7.4e-70 267.7 207 60.4
BolC3t18121H Brassica oleracea HOM05D007035 ORTHO05D008774 7.4e-70 267.7 207 60.4
Cc07_g12370 Coffea canephora HOM05D007035 ORTHO05D008774 3.1e-68 262.3 203 60.6
Thhalv10022849m.g Eutrema salsugineum HOM05D007035 ORTHO05D008774 6.9e-68 261.2 205 59.0
Lj4A228G16 Lonicera japonica HOM05D007035 ORTHO05D008774 2.6e-67 259.2 183 68.3
HPP92_014997 Vanilla planifolia HOM05D007035 ORTHO05D008774 7.7e-67 257.7 205 59.0
COL.COLO4_22513 Corchorus olitorius HOM05D007035 ORTHO05D008774 1.4e-65 253.4 201 59.7
Migut.L00741 Erythranthe guttata HOM05D007035 ORTHO05D008774 2.5e-65 252.7 203 58.6
VMungo0251G2208 Vigna mungo HOM05D007035 ORTHO05D008774 4.2e-65 251.9 188 62.8
SGA_v2.0_scaffold229G43297 Striga asiatica HOM05D001343 ORTHO05D002008 9.4e-65 250.8 203 59.1
SalBow5G2770 Salvia bowleyana HOM05D007035 ORTHO05D008774 6.7e-63 244.6 203 56.7
Hund08627 Selenicereus undatus HOM05D007035 ORTHO05D008774 3.3e-62 242.3 186 59.7
ECA238G0027 Erigeron canadensis HOM05D007035 ORTHO05D008774 4.4e-62 241.9 184 60.3
Aa31LG8G14960 Aethionema arabicum HOM05D000088 ORTHO05D000933 8.2e-61 237.7 181 61.3
unitig_88.g27771 Utricularia gibba HOM05D007035 ORTHO05D008774 1.8e-60 236.5 206 56.8
AUR62032933 Chenopodium quinoa HOM05D007035 ORTHO05D008774 5.3e-60 235.0 168 63.1
QL06p052340 Quercus lobata HOM05D007035 ORTHO05D008774 2.0e-59 233.0 164 67.1
ATR0661G057 Amborella trichopoda HOM05D007035 ORTHO05D008774 3.8e-58 228.8 186 58.1
Peaxi162Scf00300g00123 Petunia axillaris HOM05D007035 ORTHO05D008774 4.2e-57 225.3 174 63.2
Os03g0107600 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 6.1e-56 221.5 212 50.5
Os04g0119300 Oryza sativa ssp. japonica HOM05D007035 ORTHO05D008774 6.1e-56 221.5 212 50.5
Pp3c1_37080 Physcomitrium patens HOM05D007035 ORTHO05D008774 8.8e-55 217.6 214 48.1
Zm00001eb241510 Zea mays HOM05D007035 ORTHO05D008774 1.1e-54 217.2 215 48.4
Glyma.16G120900 Glycine max HOM05D007035 ORTHO05D008774 1.3e-53 213.8 161 62.7
RcHm_v2.0_Chr2g0098161 Rosa chinensis HOM05D007035 ORTHO05D008774 5.9e-51 204.9 165 58.8
Dinv40155 Davidia involucrata HOM05D002155 ORTHO05D002215 1.3e-50 203.8 145 66.2
MSTRG.15590 Avicennia marina HOM05D007035 ORTHO05D008774 6.5e-50 201.4 161 60.9
Mapoly0027s0184 Marchantia polymorpha HOM05D007035 ORTHO05D008774 1.8e-47 193.4 219 43.8
Sc20g0005390 Simmondsia chinensis HOM05D007035 ORTHO05D008774 1.8e-47 193.4 149 61.1
AUR62017739 Chenopodium quinoa HOM05D007035 ORTHO05D008774 7.5e-46 188.0 119 70.6
Cpa.g.sc6.337 Carica papaya HOM05D007035 ORTHO05D008774 1.4e-44 183.7 146 61.0
Aqoxy6G01870 Aquilegia oxysepala HOM05D007035 ORTHO05D008774 1.6e-43 180.3 148 60.1
AL3G27500 Arabidopsis lyrata HOM05D007035 ORTHO05D008774 3.5e-43 179.1 140 59.3
CARHR107960 Cardamine hirsuta HOM05D007035 ORTHO05D008774 9.4e-41 171.0 120 65.8
Duzib147G1308 Durio zibethinus HOM05D007035 ORTHO05D008774 2.1e-40 169.9 168 50.6
SMO364G0252 Selaginella moellendorffii HOM05D007035 ORTHO05D008774 2.3e-39 166.4 162 46.9
AagrBONN_evm.TU.Sc2ySwM_117.3401 Anthoceros agrestis HOM05D007035 ORTHO05D008774 2.6e-30 136.3 156 42.3
Prupe.1G268600 Prunus persica HOM05D007035 ORTHO05D008774 1.3e-29 134.0 106 55.7
Prupe.6G001100 Prunus persica HOM05D007035 ORTHO05D008774 4.9e-29 132.1 106 54.7
Eucgr.J01132 Eucalyptus grandis HOM05D007035 ORTHO05D008774 4.5e-27 125.6 146 46.6
SEGI_40855 Sequoiadendron giganteum HOM05D007035 ORTHO05D008774 5.9e-27 125.2 168 38.7
CBR_g48433 Chara braunii HOM05D007035 ORTHO05D008774 1.5e-25 120.6 272 26.8
Cre17.g720550 Chlamydomonas reinhardtii HOM05D007035 ORTHO05D008774 8.0e-24 114.8 213 30.0
PRCOL_00002518 Prasinoderma coloniale HOM05D007035 ORTHO05D008774 1.0e-23 114.4 219 29.2
MCO10G322 Micromonas commoda HOM05D007035 ORTHO05D008774 8.3e-21 104.8 152 35.5
RcHm_v2.0_Chr5g0036401 Rosa chinensis HOM05D007035 ORTHO05D008774 1.2e-16 90.9 106 43.4
Cpa.g.sc6.336 Carica papaya HOM05D007035 ORTHO05D008774 6.2e-16 88.6 56 71.4
Peaxi162Scf00300g00119 Petunia axillaris HOM05D007035 ORTHO05D008774 4.4e-14 82.4 60 61.7
RcHm_v2.0_Chr5g0036471 Rosa chinensis HOM05D007035 ORTHO05D008774 6.2e-08 62.0 57 45.6


User provided reference genes

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