Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0600 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 4.4e-124 448.0 227 100.0
CDE02G1129 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 2.0e-116 422.5 228 95.2
TWI36G0586 Tripterygium wilfordii HOM05D001304 ORTHO05D008890 2.6e-76 289.3 225 68.4
Manes.12G017100 Manihot esculenta HOM05D001304 ORTHO05D008890 2.9e-75 285.8 229 67.2
PGR119G0865 Punica granatum HOM05D001304 ORTHO05D008890 1.1e-74 283.9 228 64.9
Ciclev10032669m.g Citrus clementina HOM05D001304 ORTHO05D008890 1.4e-74 283.5 226 67.7
VMungo1383G0240 Vigna mungo HOM05D001304 ORTHO05D008890 1.2e-73 280.4 231 66.2
Eucgr.H04690 Eucalyptus grandis HOM05D001304 ORTHO05D008890 1.6e-73 280.0 232 64.7
Sc04g0009800 Simmondsia chinensis HOM05D001304 ORTHO05D008890 7.9e-73 277.7 227 67.0
Dinv11009 Davidia involucrata HOM05D001304 ORTHO05D008890 1.0e-72 277.3 229 64.2
CsaV3_2G025190 Cucumis sativus L. HOM05D001304 ORTHO05D008890 1.3e-72 276.9 228 65.4
TAR622G1249 Trochodendron aralioides HOM05D001304 ORTHO05D008890 1.3e-72 276.9 228 66.2
Oeu020321.1 Olea europaea HOM05D001304 ORTHO05D008890 1.8e-72 276.6 231 64.5
arahy.Tifrunner.gnm1.ann1.VHC2JK Arachis hypogaea HOM05D001304 ORTHO05D008890 3.0e-72 275.8 230 64.3
Prupe.1G237600 Prunus persica HOM05D001304 ORTHO05D008890 3.0e-72 275.8 231 64.5
Glyma.11G246700 Glycine max HOM05D001304 ORTHO05D008890 5.1e-72 275.0 238 60.5
MSTRG.7966 Avicennia marina HOM05D001304 ORTHO05D008890 6.7e-72 274.6 227 63.9
Cc11_g16390 Coffea canephora HOM05D001304 ORTHO05D008890 6.7e-72 274.6 227 65.2
Haze_12318 Corylus avellana HOM05D001304 ORTHO05D008890 6.7e-72 274.6 224 64.3
A07p32450 Brassica napus HOM05D001304 ORTHO05D008890 1.5e-71 273.5 228 63.6
BraA07t30869Z Brassica rapa HOM05D001304 ORTHO05D008890 1.5e-71 273.5 228 63.6
Ca_16494_v3 Cicer arietinum L. HOM05D001304 ORTHO05D008890 1.5e-71 273.5 219 66.2
MD13G1108600 Malus domestica HOM05D001304 ORTHO05D008890 5.7e-71 271.6 229 64.6
PSO782G0777 Papaver somniferum HOM05D001304 ORTHO05D008890 5.7e-71 271.6 228 63.2
EL10As2g23248 Beta vulgaris HOM05D001304 ORTHO05D008890 7.4e-71 271.2 230 60.9
CiPaw.05G174500 Carya illinoinensis HOM05D001304 ORTHO05D008890 7.4e-71 271.2 175 77.1
AUR62005553 Chenopodium quinoa HOM05D001304 ORTHO05D008890 1.6e-70 270.0 231 60.6
Phvul.001G258300 Phaseolus vulgaris HOM05D001304 ORTHO05D008890 1.6e-70 270.0 226 64.2
Potri.010G053600 Populus trichocarpa HOM05D001304 ORTHO05D008890 1.6e-70 270.0 242 62.8
FvH4_4g24830 Fragaria vesca HOM05D001304 ORTHO05D008890 2.8e-70 269.2 225 63.6
FAN07G1515 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.8e-70 269.2 225 63.6
FAN12G0763 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.8e-70 269.2 225 63.6
FAN22G1346 Fragaria x ananassa HOM05D001304 ORTHO05D008890 2.8e-70 269.2 225 63.6
PSO063G7645 Papaver somniferum HOM05D001304 ORTHO05D008890 2.8e-70 269.2 228 62.7
PGSC0003DMG400017453 Solanum tuberosum HOM05D001304 ORTHO05D008890 2.8e-70 269.2 224 64.7
BcaC08g46045 Brassica carinata HOM05D001304 ORTHO05D008890 3.7e-70 268.9 228 62.7
C06p38480 Brassica napus HOM05D001304 ORTHO05D008890 3.7e-70 268.9 228 62.7
Cfa009288 Carpinus fangiana HOM05D001304 ORTHO05D008890 3.7e-70 268.9 224 63.8
Sed0004969 Sechium edule HOM05D001304 ORTHO05D008890 4.8e-70 268.5 235 63.8
Solyc05g014310.3 Solanum lycopersicum HOM05D001304 ORTHO05D008890 6.2e-70 268.1 224 66.1
SGA_v2.0_scaffold484G52361 Striga asiatica HOM05D001304 ORTHO05D008890 6.2e-70 268.1 226 64.2
BcaB03g15175 Brassica carinata HOM05D001304 ORTHO05D008890 8.2e-70 267.7 225 63.1
FAN17G2678 Fragaria x ananassa HOM05D001304 ORTHO05D008890 8.2e-70 267.7 225 63.6
Thhalv10019020m.g Eutrema salsugineum HOM05D001304 ORTHO05D008890 1.1e-69 267.3 231 63.2
Nitab4.5_0000041g0390 Nicotiana tabacum HOM05D001304 ORTHO05D008890 1.1e-69 267.3 235 62.6
RcHm_v2.0_Chr4g0431911 Rosa chinensis HOM05D001304 ORTHO05D008890 1.1e-69 267.3 227 63.0
Actinidia15135 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.4e-69 266.9 222 63.1
AL2G26400 Arabidopsis lyrata HOM05D001304 ORTHO05D008890 1.4e-69 266.9 226 63.7
ATR0824G252 Amborella trichopoda HOM05D001304 ORTHO05D008890 1.8e-69 266.5 219 63.0
Carub.0002s1413 Capsella rubella HOM05D001304 ORTHO05D008890 1.8e-69 266.5 226 63.3
CDE04G1632 Ceratophyllum demersum HOM05D001304 ORTHO05D008890 1.8e-69 266.5 222 61.3
Sopen05g009420 Solanum pennellii HOM05D001304 ORTHO05D008890 1.8e-69 266.5 224 65.2
THA.LOC104825532 Tarenaya hassleriana HOM05D001304 ORTHO05D008890 1.8e-69 266.5 235 62.6
AT1G67700 Arabidopsis thaliana HOM05D001304 ORTHO05D008890 3.1e-69 265.8 230 62.2
BcaC08g46187 Brassica carinata HOM05D001304 ORTHO05D008890 4.1e-69 265.4 225 63.1
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 4.1e-69 265.4 225 63.1
COL.COLO4_23565 Corchorus olitorius HOM05D001304 ORTHO05D008890 5.3e-69 265.0 237 59.9
Sabra10G0017000 Salix brachista HOM05D001304 ORTHO05D008890 9.0e-69 264.2 242 61.6
Ah.02g130500 Amaranthus hybridus HOM05D001304 ORTHO05D008890 1.2e-68 263.8 210 63.8
Sp5g22690 Schrenkiella parvula HOM05D001304 ORTHO05D008890 1.2e-68 263.8 225 63.1
SalBow2G0118 Salvia bowleyana HOM05D001304 ORTHO05D008890 4.5e-68 261.9 227 62.1
CARHR060290 Cardamine hirsuta HOM05D001304 ORTHO05D008890 7.6e-68 261.2 236 60.6
Aa31LG4G12100 Aethionema arabicum HOM05D001304 ORTHO05D008890 2.2e-67 259.6 228 61.4
AUR62024180 Chenopodium quinoa HOM05D001304 ORTHO05D008890 2.2e-67 259.6 231 59.3
Peaxi162Scf00128g00729 Petunia axillaris HOM05D001304 ORTHO05D008890 2.2e-67 259.6 231 62.3
Migut.K00680 Erythranthe guttata HOM05D001304 ORTHO05D008890 3.8e-67 258.8 240 59.2
Rhsim12G0107100 Rhododendron simsii HOM05D001304 ORTHO05D008890 2.5e-66 256.1 224 63.4
unitig_8.g2912 Utricularia gibba HOM05D000468 ORTHO05D008890 3.2e-66 255.8 227 61.7
Gohir.D04G181000 Gossypium hirsutum HOM05D001304 ORTHO05D008890 5.5e-66 255.0 238 61.3
Aqoxy5G03572 Aquilegia oxysepala HOM05D001304 ORTHO05D008890 9.3e-66 254.2 222 61.3
CANSAT01G0179 Cannabis sativa HOM05D001304 ORTHO05D008890 4.6e-65 251.9 231 60.2
ECA233G5962 Erigeron canadensis HOM05D000468 ORTHO05D000548 7.9e-65 251.1 205 63.4
Atru.chr11.2216 Acer truncatum HOM05D001304 ORTHO05D008890 1.8e-64 250.0 202 66.3
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 2.3e-64 249.6 255 55.7
Nitab4.5_0001318g0090 Nicotiana tabacum HOM05D001304 ORTHO05D008890 2.3e-64 249.6 225 64.4
Hund06057 Selenicereus undatus HOM05D001304 ORTHO05D008890 3.0e-64 249.2 233 58.8
HanXRQChr08g0207321 Helianthus annuus HOM05D001304 ORTHO05D008890 2.2e-62 243.0 168 72.0
Lj6C819T3 Lonicera japonica HOM05D001304 ORTHO05D008890 2.8e-62 242.7 174 71.3
HPP92_004594 Vanilla planifolia HOM05D001304 ORTHO05D008890 1.4e-61 240.4 162 73.5
Zm00001eb246340 Zea mays HOM05D001304 ORTHO05D008890 1.3e-59 233.8 183 64.5
Gohir.A04G137800 Gossypium hirsutum HOM05D001304 ORTHO05D008890 2.9e-59 232.6 175 70.3
Lalb_Chr08g0230761 Lupinus albus HOM05D001304 ORTHO05D008890 2.9e-59 232.6 229 55.9
Os02g0600200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D008890 2.9e-59 232.6 178 65.7
Lj6g0017703 Lotus japonicus HOM05D001304 ORTHO05D008890 3.8e-59 232.3 232 55.6
Gorai.012G174200 Gossypium raimondii HOM05D001304 ORTHO05D008890 2.5e-58 229.6 158 74.7
Duzib251G0230 Durio zibethinus HOM05D001304 ORTHO05D008890 3.2e-58 229.2 158 72.2
Thecc.02G270700 Theobroma cacao HOM05D001304 ORTHO05D008890 9.4e-58 227.6 158 70.9
Cpa.g.c30628.2 Carica papaya HOM05D001304 ORTHO05D008890 3.0e-56 222.6 227 54.2
Lsat_1_v5_gn_8_150960 Lactuca sativa HOM05D001304 ORTHO05D008890 2.5e-55 219.5 234 53.4
TPR.G33410 Trifolium pratense HOM05D001304 ORTHO05D008890 5.3e-53 211.8 153 68.6
Medtr3g086040 Medicago truncatula HOM05D001304 ORTHO05D008890 1.2e-52 210.7 150 69.3
GSVIVG01010306001 Vitis vinifera HOM05D001304 ORTHO05D008890 7.7e-52 208.0 140 76.4
SEGI_40444 Sequoiadendron giganteum HOM05D001304 ORTHO05D008890 3.8e-51 205.7 187 52.9
CSS0032412 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008721 5.0e-51 205.3 133 74.4
Actinidia24567 Actinidia chinensis HOM05D001304 ORTHO05D008890 1.1e-50 204.1 224 50.4
vmacro16148 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 9.4e-50 201.1 133 72.9
TAR629G1650 Trochodendron aralioides HOM05D001304 ORTHO05D008890 4.4e-47 192.2 134 71.6
Hma1.2p1_0079F.1_g041530 Hydrangea macrophylla HOM05D001304 ORTHO05D008890 5.3e-45 185.3 231 50.2
AagrBONN_evm.TU.Sc2ySwM_368.469 Anthoceros agrestis HOM05D001304 ORTHO05D008890 2.6e-44 183.0 189 48.1
BolC6t38945H Brassica oleracea HOM05D001304 ORTHO05D008890 1.7e-43 180.3 123 74.0
Mapoly0101s0039 Marchantia polymorpha HOM05D001304 ORTHO05D008890 4.7e-41 172.2 176 48.3
Pp3c14_9580 Physcomitrium patens HOM05D001304 ORTHO05D008890 3.0e-40 169.5 178 50.6
Psat5g093920 Pisum sativum HOM05D001304 ORTHO05D008890 1.3e-38 164.1 95 78.9
MELO3C010716.2 Cucumis melo HOM05D001304 ORTHO05D008890 3.7e-38 162.5 135 62.2
arahy.Tifrunner.gnm1.ann1.Q18UTF Arachis hypogaea HOM05D001304 ORTHO05D008890 5.9e-36 155.2 230 45.7
CBR_g28672 Chara braunii HOM05D001304 ORTHO05D008890 5.5e-34 148.7 179 43.0
DCAR_026486 Daucus carota HOM05D000468 ORTHO05D008890 4.0e-32 142.5 138 57.2
Cfa021197 Carpinus fangiana HOM05D001304 ORTHO05D008890 2.0e-31 140.2 134 59.0
SMO367G0665 Selaginella moellendorffii HOM05D001304 ORTHO05D008890 1.3e-30 137.5 156 41.0
MBI06_g05241_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D008890 1.3e-27 127.5 226 38.1
Duzib248G0877 Durio zibethinus HOM05D001304 ORTHO05D008890 5.0e-27 125.6 153 48.4
Oeu009356.1 Olea europaea HOM05D001304 ORTHO05D008890 1.6e-17 94.0 57 75.4
MCO01G115 Micromonas commoda HOM05D001304 ORTHO05D008890 4.9e-14 82.4 174 29.3
ClCG08G017440 Citrullus lanatus HOM05D001304 ORTHO05D008890 2.4e-13 80.1 91 54.9
PRCOL_00000361 Prasinoderma coloniale HOM05D001304 ORTHO05D008890 6.6e-11 72.0 120 29.2
vmacro16147 Vaccinium macrocarpon HOM05D001304 ORTHO05D008890 3.6e-09 66.2 91 45.1


User provided reference genes

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