Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0593 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 3.1e-205 718.4 404 100.0
CDE02G0054 Ceratophyllum demersum HOM05D004833 ORTHO05D005671 1.7e-142 510.0 427 71.0
TAR362G1060 Trochodendron aralioides HOM05D004833 ORTHO05D005671 4.1e-40 169.9 467 31.7
Nn4g25548 Nelumbo nucifera HOM05D004833 ORTHO05D005671 7.0e-40 169.1 454 32.4
TAR633G1100 Trochodendron aralioides HOM05D004833 ORTHO05D005671 3.9e-38 163.3 454 34.6
Aqoxy4G02560 Aquilegia oxysepala HOM05D004833 ORTHO05D005671 1.7e-33 147.9 419 32.2
PSO761G0588 Papaver somniferum HOM05D004833 ORTHO05D005671 8.3e-33 145.6 464 28.7
PSO210G7662 Papaver somniferum HOM05D004833 ORTHO05D005671 1.1e-32 145.2 451 28.6
Sed0021810 Sechium edule HOM05D004833 ORTHO05D005671 5.4e-32 142.9 424 30.2
MBI19_g03257_MAGBIO Magnolia biondii HOM05D004833 ORTHO05D005671 1.3e-30 138.3 447 30.9
CSS0034891 Camellia sinensis var. sinensis HOM05D004833 ORTHO05D005671 3.0e-30 137.1 455 34.3
Manes.03G168000 Manihot esculenta HOM05D004833 ORTHO05D005671 4.3e-29 133.3 418 28.7
Sabra10G0033900 Salix brachista HOM05D004833 ORTHO05D005671 1.2e-28 131.7 423 29.6
Thecc.04G248100 Theobroma cacao HOM05D004833 ORTHO05D005671 1.2e-28 131.7 439 29.2
Potri.010G074900 Populus trichocarpa HOM05D004833 ORTHO05D005671 2.3e-27 127.5 430 29.3
A05p45200 Brassica napus HOM05D004833 ORTHO05D005671 3.1e-27 127.1 393 29.5
BraA05t23142Z Brassica rapa HOM05D004833 ORTHO05D005671 4.0e-27 126.7 441 27.4
BcaC01g04448 Brassica carinata HOM05D004833 ORTHO05D005671 5.2e-27 126.3 482 26.3
Dinv29897 Davidia involucrata HOM05D004833 ORTHO05D005671 1.2e-26 125.2 435 27.8
MELO3C006459.2 Cucumis melo HOM05D004833 ORTHO05D005671 2.0e-26 124.4 430 28.1
HanXRQChr05g0145861 Helianthus annuus HOM05D004833 ORTHO05D005671 3.4e-26 123.6 398 30.9
HanXRQChr11g0331421 Helianthus annuus HOM05D004833 ORTHO05D005671 3.4e-26 123.6 398 30.9
QL06p016027 Quercus lobata HOM05D004833 ORTHO05D005671 5.8e-26 122.9 454 28.0
Actinidia40079 Actinidia chinensis HOM05D004833 ORTHO05D005671 1.7e-25 121.3 456 28.5
TWI09G0514 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 2.9e-25 120.6 391 27.4
SHI08746 Sapria himalayana HOM05D004833 ORTHO05D005671 6.4e-25 119.4 383 28.7
ClCG05G004520 Citrullus lanatus HOM05D004833 ORTHO05D005671 8.3e-25 119.0 423 27.4
BcaC01g04551 Brassica carinata HOM05D004833 ORTHO05D005671 1.1e-24 118.6 467 27.4
CsaV3_3G012480 Cucumis sativus L. HOM05D004833 ORTHO05D005671 1.1e-24 118.6 424 26.7
HanXRQChr09g0257341 Helianthus annuus HOM05D004833 ORTHO05D005671 1.9e-24 117.9 401 29.4
Atru.chr4.2164 Acer truncatum HOM05D004833 ORTHO05D005671 2.4e-24 117.5 431 33.2
TWI53G1508 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 3.2e-24 117.1 397 29.0
TWI53G1633 Tripterygium wilfordii HOM05D004833 ORTHO05D005671 3.2e-24 117.1 397 29.0
AT4G14490 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 5.4e-24 116.3 412 27.9
Cfa008364 Carpinus fangiana HOM05D004833 ORTHO05D005671 5.4e-24 116.3 513 25.5
Duzib212G0317 Durio zibethinus HOM05D004833 ORTHO05D005671 1.2e-23 115.2 395 29.1
Lsat_1_v5_gn_4_144160 Lactuca sativa HOM05D004833 ORTHO05D005671 1.2e-23 115.2 412 28.4
DCAR_028835 Daucus carota HOM05D004833 ORTHO05D005671 3.5e-23 113.6 402 30.6
Hma1.2p1_0310F.1_g120780 Hydrangea macrophylla HOM05D004833 ORTHO05D005671 3.5e-23 113.6 487 27.7
C03p40050 Brassica napus HOM05D005209 ORTHO05D006188 4.6e-23 113.2 478 27.6
BolC3t16270H Brassica oleracea HOM05D005209 ORTHO05D006188 4.6e-23 113.2 478 27.6
FAN28G1505 Fragaria x ananassa HOM05D004833 ORTHO05D005671 6.0e-23 112.8 190 36.3
BcaB04g21413 Brassica carinata HOM05D004833 ORTHO05D005671 1.3e-22 111.7 430 26.0
Ciclev10005174m.g Citrus clementina HOM05D004833 ORTHO05D005671 1.7e-22 111.3 412 27.7
RcHm_v2.0_Chr7g0224291 Rosa chinensis HOM05D004833 ORTHO05D005671 1.7e-22 111.3 391 26.9
THA.LOC104808605 Tarenaya hassleriana HOM05D004833 ORTHO05D005671 1.7e-22 111.3 203 36.0
SalBow3G2302 Salvia bowleyana HOM05D004833 ORTHO05D005671 3.0e-22 110.5 428 29.7
Cpa.g.sc44.108 Carica papaya HOM05D004833 ORTHO05D005671 8.6e-22 109.0 416 28.4
FAN17G0043 Fragaria x ananassa HOM05D004833 ORTHO05D005671 8.6e-22 109.0 195 34.9
FAN17G0464 Fragaria x ananassa HOM05D004833 ORTHO05D005671 8.6e-22 109.0 195 35.4
Lj6P658T33 Lonicera japonica HOM05D004833 ORTHO05D005671 8.6e-22 109.0 194 37.6
FAN12G1135 Fragaria x ananassa HOM05D004833 ORTHO05D005671 1.1e-21 108.6 200 36.0
FAN12G1996 Fragaria x ananassa HOM05D004833 ORTHO05D005671 1.1e-21 108.6 200 36.0
MD16G1211500 Malus domestica HOM05D004833 ORTHO05D005671 1.1e-21 108.6 401 27.7
SEGI_17679 Sequoiadendron giganteum HOM05D004833 ORTHO05D005671 1.1e-21 108.6 95 57.9
FvH4_4g02980 Fragaria vesca HOM05D004833 ORTHO05D005671 1.5e-21 108.2 195 34.9
Rhsim11G0181500 Rhododendron simsii HOM05D004833 ORTHO05D005671 4.3e-21 106.7 425 27.1
ECA232G1138 Erigeron canadensis HOM05D004833 ORTHO05D005671 5.6e-21 106.3 108 46.3
Eucgr.G02729 Eucalyptus grandis HOM05D004833 ORTHO05D005671 7.3e-21 105.9 432 27.1
Rhsim04G0155000 Rhododendron simsii HOM05D004833 ORTHO05D005671 7.3e-21 105.9 441 28.8
BraSC141t45625Z Brassica rapa HOM05D004833 ORTHO05D005671 9.5e-21 105.5 488 26.0
Prupe.1G033600 Prunus persica HOM05D004833 ORTHO05D005671 9.5e-21 105.5 434 27.0
Ciclev10004978m.g Citrus clementina HOM05D004833 ORTHO05D005671 1.2e-20 105.1 444 26.4
COL.COLO4_15806 Corchorus olitorius HOM05D004833 ORTHO05D005671 1.2e-20 105.1 405 26.9
Phvul.002G328500 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 1.2e-20 105.1 413 25.9
Ah.15g090410 Amaranthus hybridus HOM05D004833 ORTHO05D005671 1.6e-20 104.8 106 49.1
CANSAT78G0301 Cannabis sativa HOM05D004833 ORTHO05D005671 1.6e-20 104.8 405 27.9
CiPaw.02G115600 Carya illinoinensis HOM05D004833 ORTHO05D005671 1.6e-20 104.8 427 29.3
RcHm_v2.0_Chr7g0211851 Rosa chinensis HOM05D004833 ORTHO05D005671 1.6e-20 104.8 162 43.2
Sp3g01440 Schrenkiella parvula HOM05D004833 ORTHO05D005671 1.6e-20 104.8 499 25.9
DCAR_024234 Daucus carota HOM05D004833 ORTHO05D005671 2.8e-20 104.0 416 27.2
ECA234G1378 Erigeron canadensis HOM05D000038 ORTHO05D000423 2.8e-20 104.0 106 46.2
ATR0693G179 Amborella trichopoda HOM05D004833 ORTHO05D005671 3.6e-20 103.6 389 26.7
MSTRG.24695 Avicennia marina HOM05D004833 ORTHO05D005671 4.7e-20 103.2 459 26.1
Gohir.A02G036200 Gossypium hirsutum HOM05D004833 ORTHO05D005671 4.7e-20 103.2 393 30.8
Gorai.005G047200 Gossypium raimondii HOM05D004833 ORTHO05D005671 6.2e-20 102.8 396 27.5
EL10Ac7g16793 Beta vulgaris HOM05D004833 ORTHO05D005671 1.1e-19 102.1 147 41.5
BcaC09g47698 Brassica carinata HOM05D004833 ORTHO05D005671 1.1e-19 102.1 502 25.1
BNapus_Darmor_BZH_scaffold_208p00080 Brassica napus HOM05D004833 ORTHO05D005671 1.1e-19 102.1 484 25.4
BraA03t12461Z Brassica rapa HOM05D005209 ORTHO05D006188 1.4e-19 101.7 470 24.7
Oeu002595.1 Olea europaea HOM05D004833 ORTHO05D005671 1.4e-19 101.7 473 25.2
HPP92_014115 Vanilla planifolia HOM05D004833 ORTHO05D005671 1.4e-19 101.7 179 39.1
Gohir.D02G042900 Gossypium hirsutum HOM05D004833 ORTHO05D005671 1.8e-19 101.3 392 27.0
Thhalv10020728m.g Eutrema salsugineum HOM05D004833 ORTHO05D005671 2.4e-19 100.9 464 25.2
Lalb_Chr05g0218581 Lupinus albus HOM05D004833 ORTHO05D005671 3.1e-19 100.5 411 34.5
CAN.G1178.27 Capsicum annuum HOM05D004833 ORTHO05D005671 5.2e-19 99.8 137 41.6
Sc25g0004110 Simmondsia chinensis HOM05D004833 ORTHO05D005671 6.8e-19 99.4 499 28.1
BolC1t05907H Brassica oleracea HOM05D004833 ORTHO05D005671 8.9e-19 99.0 502 24.9
RcHm_v2.0_Chr4g0391131 Rosa chinensis HOM05D004833 ORTHO05D005671 8.9e-19 99.0 453 26.5
unitig_899.g14712 Utricularia gibba HOM05D004833 ORTHO05D005671 1.2e-18 98.6 448 26.6
Aa31LG9G2800 Aethionema arabicum HOM05D004833 ORTHO05D005671 1.5e-18 98.2 143 39.9
Carub.0007s2773 Capsella rubella HOM05D004833 ORTHO05D005671 1.5e-18 98.2 423 25.5
Aa31LG8G9600 Aethionema arabicum HOM05D004833 ORTHO05D005671 2.0e-18 97.8 201 34.8
arahy.Tifrunner.gnm1.ann1.CY5RP0 Arachis hypogaea HOM05D004833 ORTHO05D005671 5.8e-18 96.3 476 27.3
A03p32920 Brassica napus HOM05D004833 ORTHO05D005671 9.9e-18 95.5 493 24.3
AL7G41650 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 1.3e-17 95.1 381 26.5
BcaC05g30352 Brassica carinata HOM05D004833 ORTHO05D005671 1.3e-17 95.1 441 26.8
HPP92_002726 Vanilla planifolia HOM05D004833 ORTHO05D005671 1.3e-17 95.1 106 46.2
Nitab4.5_0002289g0040 Nicotiana tabacum HOM05D004833 ORTHO05D005671 2.2e-17 94.4 136 40.4
HPP92_002667 Vanilla planifolia HOM05D004833 ORTHO05D005671 2.2e-17 94.4 391 27.1
Lj4g0009172 Lotus japonicus HOM05D004833 ORTHO05D005671 2.9e-17 94.0 105 45.7
PGR004G1107 Punica granatum HOM05D004833 ORTHO05D005671 2.9e-17 94.0 449 24.1
C09p75700 Brassica napus HOM05D004833 ORTHO05D005671 3.8e-17 93.6 441 26.8
CARHR076370 Cardamine hirsuta HOM05D004833 ORTHO05D005671 4.9e-17 93.2 206 33.5
Nitab4.5_0001381g0160 Nicotiana tabacum HOM05D004833 ORTHO05D005671 6.4e-17 92.8 135 40.7
Solyc08g078470.4 Solanum lycopersicum HOM05D004833 ORTHO05D005671 6.4e-17 92.8 133 42.1
Sopen08g026960 Solanum pennellii HOM05D004833 ORTHO05D005671 6.4e-17 92.8 133 41.4
AL3G11690 Arabidopsis lyrata HOM05D004833 ORTHO05D005671 8.4e-17 92.4 361 27.1
SGA_v2.0_scaffold308G48094 Striga asiatica HOM05D004833 ORTHO05D005671 8.4e-17 92.4 431 25.1
Migut.N00255 Erythranthe guttata HOM05D004833 ORTHO05D005671 1.4e-16 91.7 448 29.0
Peaxi162Scf00209g00118 Petunia axillaris HOM05D004833 ORTHO05D005671 1.4e-16 91.7 484 30.8
PGSC0003DMG400004768 Solanum tuberosum HOM05D004833 ORTHO05D005671 1.9e-16 91.3 113 43.4
arahy.Tifrunner.gnm1.ann1.DI6KST Arachis hypogaea HOM05D004833 ORTHO05D005671 4.2e-16 90.1 464 28.0
ECA232G0897 Erigeron canadensis HOM05D004833 ORTHO05D005671 5.4e-16 89.7 106 40.6
AT3G02400 Arabidopsis thaliana HOM05D004833 ORTHO05D005671 7.1e-16 89.4 186 33.9
TPR.G14924 Trifolium pratense HOM05D004833 ORTHO05D005671 7.1e-16 89.4 422 32.0
Glyma.07G201900 Glycine max HOM05D004833 ORTHO05D005671 2.1e-15 87.8 480 23.5
QL04p071625 Quercus lobata HOM05D004833 ORTHO05D005671 2.1e-15 87.8 171 35.7
Os03g0728500 Oryza sativa ssp. japonica HOM05D004833 ORTHO05D005671 4.6e-15 86.7 108 43.5
unitig_52.g17411 Utricularia gibba HOM05D004833 ORTHO05D005671 4.6e-15 86.7 139 38.1
Carub.0003s0149 Capsella rubella HOM05D004833 ORTHO05D005671 7.8e-15 85.9 423 24.8
Medtr4g088240 Medicago truncatula HOM05D004833 ORTHO05D005671 1.0e-14 85.5 396 25.0
Glyma.13G174400 Glycine max HOM05D004833 ORTHO05D005671 2.3e-14 84.3 174 32.8
Zm00001eb056120 Zea mays HOM05D004833 ORTHO05D005671 3.0e-14 84.0 104 44.2
Duzib151G1051 Durio zibethinus HOM05D004833 ORTHO05D005671 3.9e-14 83.6 386 25.6
Lj4g0026393 Lotus japonicus HOM05D004833 ORTHO05D005671 5.1e-14 83.2 421 31.6
Psat7g116640 Pisum sativum HOM05D004833 ORTHO05D005671 5.1e-14 83.2 181 31.5
VMungo0251G0345 Vigna mungo HOM05D004833 ORTHO05D005671 1.5e-13 81.6 451 23.1
CANSAT25G0083 Cannabis sativa HOM05D004833 ORTHO05D005671 5.6e-13 79.7 189 35.4
Zm00001eb215540 Zea mays HOM05D004833 ORTHO05D005671 1.6e-12 78.2 159 33.3
AagrBONN_evm.TU.Sc2ySwM_368.3218 Anthoceros agrestis HOM05D004833 ORTHO05D005671 8.1e-12 75.9 100 45.0
Ca_18598_v3 Cicer arietinum L. HOM05D004833 ORTHO05D005671 1.1e-11 75.5 427 27.9
Medtr4g088235 Medicago truncatula HOM05D004833 ORTHO05D005671 1.8e-11 74.7 182 30.2
Pp3c19_11080 Physcomitrium patens HOM05D004833 ORTHO05D005671 3.1e-11 73.9 141 31.9
MD13G1205500 Malus domestica HOM05D004833 ORTHO05D005671 4.0e-11 73.6 399 24.1
Medtr8g069140 Medicago truncatula HOM05D004833 ORTHO05D005671 4.0e-11 73.6 182 30.2
CBR_g21751 Chara braunii HOM05D004833 ORTHO05D005671 2.7e-07 60.8 101 35.6
Pp3c18_4140 Physcomitrium patens HOM05D004833 ORTHO05D005671 3.5e-07 60.5 96 34.4
BolC5t35084H Brassica oleracea HOM05D004833 ORTHO05D005671 4.6e-07 60.1 56 46.4
Cre09.g402350 Chlamydomonas reinhardtii HOM05D004833 ORTHO05D005671 2.3e-06 57.8 109 34.9
Phvul.002G234300 Phaseolus vulgaris HOM05D004833 ORTHO05D005671 3.0e-06 57.4 54 53.7
Mapoly0067s0089 Marchantia polymorpha HOM05D004833 ORTHO05D005671 5.1e-06 56.6 166 28.3


User provided reference genes

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