Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0536 Ceratophyllum demersum HOM05D005298 ORTHO05D043882 2.9e-45 184.9 95 100.0
CDE02G0960 Ceratophyllum demersum HOM05D005298 ORTHO05D043882 5.5e-20 100.9 92 68.5
MBI18_g28901_MAGBIO Magnolia biondii HOM05D005298 ORTHO05D008015 2.9e-13 78.6 82 52.4
vmacro07993 Vaccinium macrocarpon HOM05D005298 ORTHO05D008015 1.9e-12 75.9 84 51.2
Glyma.17G038500 Glycine max HOM05D005298 ORTHO05D008015 4.2e-12 74.7 92 46.7
Nn3g21868 Nelumbo nucifera HOM05D005298 ORTHO05D008015 4.2e-12 74.7 88 47.7
GSVIVG01017664001 Vitis vinifera HOM05D005298 ORTHO05D008015 5.5e-12 74.3 88 47.7
AUR62029998 Chenopodium quinoa HOM05D005298 ORTHO05D008015 7.2e-12 73.9 93 51.6
Actinidia18497 Actinidia chinensis HOM05D005298 ORTHO05D008015 9.5e-12 73.6 85 48.2
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 1.2e-11 73.2 88 48.9
EL10Ac3g06277 Beta vulgaris HOM05D005298 ORTHO05D008015 1.6e-11 72.8 88 51.1
Cfa015712 Carpinus fangiana HOM05D005298 ORTHO05D008015 1.6e-11 72.8 95 46.3
Potri.010G152700 Populus trichocarpa HOM05D005298 ORTHO05D008015 1.6e-11 72.8 83 49.4
Aqoxy2G02567 Aquilegia oxysepala HOM05D005298 ORTHO05D008015 1.4e-10 69.7 79 50.6
Dinv29532 Davidia involucrata HOM05D005298 ORTHO05D008015 1.4e-10 69.7 84 48.8
Gorai.005G070900 Gossypium raimondii HOM05D005298 ORTHO05D008015 1.4e-10 69.7 84 46.4
QL06p013696 Quercus lobata HOM05D005298 ORTHO05D008015 1.8e-10 69.3 84 46.4
CSS0017624 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 3.0e-10 68.6 84 46.4
CSS0028497 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D026321 3.0e-10 68.6 84 46.4
Haze_00801 Corylus avellana HOM05D005298 ORTHO05D008015 3.0e-10 68.6 95 45.3
Gohir.A02G057201 Gossypium hirsutum HOM05D005298 ORTHO05D008015 3.0e-10 68.6 84 46.4
ECA233G2380 Erigeron canadensis HOM05D005298 ORTHO05D008015 4.0e-10 68.2 88 48.9
Glyma.07G233500 Glycine max HOM05D005298 ORTHO05D008015 4.0e-10 68.2 86 47.7
Peaxi162Scf00126g10123 Petunia axillaris HOM05D005298 ORTHO05D008015 5.2e-10 67.8 83 45.8
Ca_21388_v3 Cicer arietinum L. HOM05D005298 ORTHO05D008015 6.8e-10 67.4 84 46.4
Gohir.D02G063000 Gossypium hirsutum HOM05D005298 ORTHO05D008015 8.8e-10 67.0 84 45.2
Nitab4.5_0000169g0140 Nicotiana tabacum HOM05D005298 ORTHO05D008015 8.8e-10 67.0 82 43.9
Rhsim04G0246500 Rhododendron simsii HOM05D005298 ORTHO05D008015 8.8e-10 67.0 84 47.6
Psat0ss1196g0600 Pisum sativum HOM05D005298 ORTHO05D008015 1.2e-09 66.6 86 46.5
Sabra10G0117500 Salix brachista HOM05D005298 ORTHO05D008015 1.2e-09 66.6 83 47.0
Thecc.04G309800 Theobroma cacao HOM05D005298 ORTHO05D008015 1.5e-09 66.2 83 45.8
Sopen01g022220 Solanum pennellii HOM05D005298 ORTHO05D008015 2.0e-09 65.9 83 43.4
VMungo1215G2609 Vigna mungo HOM05D005298 ORTHO05D008015 2.0e-09 65.9 86 46.5
Phvul.003G119400 Phaseolus vulgaris HOM05D005298 ORTHO05D008015 3.4e-09 65.1 87 44.8
PGSC0003DMG400012034 Solanum tuberosum HOM05D005298 ORTHO05D008015 3.4e-09 65.1 83 44.6
Aa31LG8G4260 Aethionema arabicum HOM05D005298 ORTHO05D008015 4.4e-09 64.7 87 46.0
Lalb_Chr07g0181831 Lupinus albus HOM05D005298 ORTHO05D008015 4.4e-09 64.7 83 45.8
Solyc01g057520.4 Solanum lycopersicum HOM05D005298 ORTHO05D008015 4.4e-09 64.7 82 42.7
COL.COLO4_34539 Corchorus olitorius HOM05D005298 ORTHO05D008015 7.5e-09 63.9 81 43.2
TPR.G12648 Trifolium pratense HOM05D005298 ORTHO05D008015 9.8e-09 63.5 87 46.0
Duzib151G1192 Durio zibethinus HOM05D005298 ORTHO05D008015 1.3e-08 63.2 82 43.9
Eucgr.H04107 Eucalyptus grandis HOM05D005298 ORTHO05D008015 2.2e-08 62.4 80 46.2
Lj4g0022536 Lotus japonicus HOM05D005298 ORTHO05D008015 2.2e-08 62.4 88 48.9
ATR0796G315 Amborella trichopoda HOM05D005298 ORTHO05D008015 3.7e-08 61.6 86 43.0
arahy.Tifrunner.gnm1.ann1.WSVI3W Arachis hypogaea HOM05D005298 ORTHO05D008015 3.7e-08 61.6 86 41.9
Cpa.g.sc146.46 Carica papaya HOM05D005298 ORTHO05D008015 3.7e-08 61.6 85 43.5
PSO210G1072 Papaver somniferum HOM05D005298 ORTHO05D008015 4.9e-08 61.2 88 40.9
MELO3C021240.2 Cucumis melo HOM05D005298 ORTHO05D008015 6.3e-08 60.8 87 40.2
Prupe.1G109100 Prunus persica HOM05D005298 ORTHO05D008015 6.3e-08 60.8 88 43.2
Lj3A839G57 Lonicera japonica HOM05D005298 ORTHO05D008015 8.3e-08 60.5 74 52.7
Oeu020287.1 Olea europaea HOM05D005298 ORTHO05D008015 8.3e-08 60.5 85 37.6
CARHR092650 Cardamine hirsuta HOM05D005298 ORTHO05D008015 1.1e-07 60.1 83 45.8
Ciclev10004217m.g Citrus clementina HOM05D005298 ORTHO05D008015 1.1e-07 60.1 77 49.4
Thhalv10019950m.g Eutrema salsugineum HOM05D005298 ORTHO05D008015 1.1e-07 60.1 81 43.2
Atru.chr4.3122 Acer truncatum HOM05D005298 ORTHO05D008015 1.4e-07 59.7 81 45.7
PGR004G2663 Punica granatum HOM05D005298 ORTHO05D008015 1.4e-07 59.7 65 49.2
MD16G1139700 Malus domestica HOM05D005298 ORTHO05D008015 2.4e-07 58.9 88 42.0
Medtr4g123670 Medicago truncatula HOM05D005298 ORTHO05D008015 5.4e-07 57.8 85 41.2
CANSAT78G1118 Cannabis sativa HOM05D005298 ORTHO05D008015 7.0e-07 57.4 92 37.0
AT3G17340 Arabidopsis thaliana HOM05D005298 ORTHO05D008015 9.2e-07 57.0 81 40.7
CsaV3_6G000130 Cucumis sativus L. HOM05D005298 ORTHO05D008015 1.2e-06 56.6 84 39.3
Sed0008409 Sechium edule HOM05D005298 ORTHO05D008015 2.0e-06 55.8 83 39.8
Ah.07g203800 Amaranthus hybridus HOM05D005298 ORTHO05D008015 2.7e-06 55.5 88 39.8
arahy.Tifrunner.gnm1.ann1.68EF5E Arachis hypogaea HOM05D005298 ORTHO05D008015 2.7e-06 55.5 83 38.6
TWI09G0537 Tripterygium wilfordii HOM05D005298 ORTHO05D008015 2.7e-06 55.5 81 42.0
C05p49050 Brassica napus HOM05D005298 ORTHO05D008015 3.5e-06 55.1 81 39.5
BolC5t33645H Brassica oleracea HOM05D005298 ORTHO05D008015 3.5e-06 55.1 81 39.5
Nitab4.5_0000992g0090 Nicotiana tabacum HOM05D005298 ORTHO05D008015 3.5e-06 55.1 104 35.6
FvH4_4g21110 Fragaria vesca HOM05D005298 ORTHO05D008015 4.5e-06 54.7 87 34.5
BcaB06g25819 Brassica carinata HOM05D005298 ORTHO05D008015 5.9e-06 54.3 82 40.2
Manes.15G003700 Manihot esculenta HOM05D005298 ORTHO05D008015 5.9e-06 54.3 83 37.3
A05p32420 Brassica napus HOM05D005298 ORTHO05D008015 7.8e-06 53.9 82 39.0
BraA05t22069Z Brassica rapa HOM05D005298 ORTHO05D008015 7.8e-06 53.9 82 39.0
FAN17G0175 Fragaria x ananassa HOM05D005298 ORTHO05D008015 7.8e-06 53.9 87 34.5


User provided reference genes

Program Settings