Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 7.6e-115 417.2 208 100.0
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 1.5e-65 253.4 211 63.0
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 6.1e-64 248.1 207 61.4
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 1.0e-63 247.3 204 61.8
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 1.8e-63 246.5 191 62.8
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 7.5e-62 241.1 181 64.1
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 1.7e-61 240.0 192 60.4
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 8.3e-61 237.7 193 62.7
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 4.1e-60 235.3 172 63.4
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 4.1e-60 235.3 191 62.3
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 4.1e-60 235.3 197 60.4
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 3.5e-59 232.3 190 61.1
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 7.8e-59 231.1 151 72.2
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 7.8e-59 231.1 157 68.8
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 3.8e-58 228.8 193 58.5
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 3.8e-58 228.8 194 58.2
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 6.6e-58 228.0 148 67.6
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 6.6e-58 228.0 193 56.0
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 6.6e-58 228.0 149 69.8
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 8.6e-58 227.6 179 61.5
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 1.1e-57 227.3 179 60.9
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 5.6e-57 224.9 168 61.9
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 5.6e-57 224.9 193 56.0
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 7.3e-57 224.6 184 59.8
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 7.3e-57 224.6 152 66.4
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.6e-56 223.4 190 56.8
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 2.1e-56 223.0 196 57.1
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 2.1e-56 223.0 152 66.4
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 2.8e-56 222.6 152 66.4
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 3.6e-56 222.2 164 64.0
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 4.7e-56 221.9 178 60.7
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 4.7e-56 221.9 150 67.3
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 6.1e-56 221.5 170 61.2
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 6.1e-56 221.5 170 61.2
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 6.1e-56 221.5 152 64.5
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 8.0e-56 221.1 181 60.2
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.0e-55 220.7 169 61.5
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 1.0e-55 220.7 170 62.9
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 1.0e-55 220.7 186 59.1
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 1.8e-55 219.9 194 56.2
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 1.8e-55 219.9 186 59.7
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 3.1e-55 219.2 203 56.7
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.1e-55 219.2 173 60.1
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 6.8e-55 218.0 164 61.0
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 6.8e-55 218.0 147 68.7
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 6.8e-55 218.0 189 59.8
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 1.2e-54 217.2 164 60.4
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 1.2e-54 217.2 166 60.2
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.2e-54 217.2 192 54.7
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.2e-54 217.2 192 54.7
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.2e-54 217.2 167 61.1
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.6e-54 216.1 192 54.2
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 3.4e-54 215.7 164 59.8
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.4e-54 215.7 167 59.9
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 3.4e-54 215.7 166 59.0
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 5.8e-54 214.9 170 61.8
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 7.5e-54 214.5 152 66.4
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 9.8e-54 214.2 173 59.5
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 1.3e-53 213.8 166 60.8
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 1.7e-53 213.4 170 61.2
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 2.2e-53 213.0 152 63.8
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.2e-53 213.0 172 57.0
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.2e-53 213.0 146 65.8
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 2.9e-53 212.6 170 57.6
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 3.7e-53 212.2 206 52.4
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 6.4e-53 211.5 149 63.8
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 6.4e-53 211.5 146 65.8
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.1e-52 210.7 173 59.0
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.1e-52 210.7 143 67.8
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 1.4e-52 210.3 149 64.4
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 1.9e-52 209.9 161 62.7
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 2.4e-52 209.5 149 63.1
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 3.2e-52 209.1 198 54.0
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 4.1e-52 208.8 152 61.8
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 7.0e-52 208.0 155 60.6
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 1.2e-51 207.2 165 58.2
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 6.0e-51 204.9 147 63.3
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 6.0e-51 204.9 149 62.4
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 6.6e-50 201.4 174 56.3
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 1.1e-49 200.7 152 62.5
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 6.8e-47 191.4 137 66.4
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.2e-45 186.4 164 56.1
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 8.3e-45 184.5 131 64.1
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 1.1e-44 184.1 128 66.4
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 4.1e-44 182.2 222 47.3
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 1.2e-43 180.6 119 66.4
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 8.6e-42 174.5 167 52.1
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 8.6e-42 174.5 190 50.5
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 8.6e-42 174.5 159 51.6
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 8.6e-42 174.5 159 51.6
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 9.5e-41 171.0 156 48.1
Nitab4.5_0000096g0330 Nicotiana tabacum HOM05D007188 ORTHO05D009102 2.2e-37 159.8 167 49.7
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 4.9e-37 158.7 150 53.3
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 4.9e-37 158.7 142 55.6
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 5.6e-33 145.2 147 46.3
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 1.2e-32 144.1 175 41.7
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 2.4e-28 129.8 87 66.7
FvH4_7g18710 Fragaria vesca HOM05D007188 ORTHO05D009102 3.5e-27 125.9 127 49.6
PSO339G6470 Papaver somniferum HOM05D007188 ORTHO05D009102 2.6e-22 109.8 113 48.7
CBR_g28804 Chara braunii HOM05D007188 ORTHO05D009102 1.1e-20 104.4 177 33.3
SEGI_08985 Sequoiadendron giganteum HOM05D007188 ORTHO05D009102 7.8e-19 98.2 62 72.6
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 1.6e-16 90.5 153 35.9
FAN10G3168 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.4e-15 86.7 95 47.4
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 3.1e-15 86.3 163 27.0
Rhsim09G0147800 Rhododendron simsii HOM05D007188 ORTHO05D009102 4.5e-14 82.4 206 33.0
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 3.2e-12 76.3 127 29.1
RhsimUnG0185100 Rhododendron simsii HOM05D007188 ORTHO05D009102 1.2e-11 74.3 175 29.7
HPP92_025582 Vanilla planifolia HOM05D006951 ORTHO05D008594 5.1e-10 68.9 49 59.2
HPP92_025583 Vanilla planifolia HOM05D006951 ORTHO05D008594 3.3e-09 66.2 43 74.4
CDE02G0641 Ceratophyllum demersum HOM05D000146 ORTHO05D002110 7.4e-09 65.1 33 93.9
AUR62034156 Chenopodium quinoa HOM05D007188 ORTHO05D009102 4.8e-08 62.4 54 55.6
Oeu034116.1 Olea europaea HOM05D007188 ORTHO05D009102 8.1e-08 61.6 47 59.6
MCO13G501 Micromonas commoda HOM05D058099 ORTHO05D044315 2.4e-07 60.1 119 28.6
vmacro04837 Vaccinium macrocarpon HOM05D000026 ORTHO05D000094 6.9e-07 58.5 39 66.7
Cre02.g144001 Chlamydomonas reinhardtii HOM05D058099 ORTHO05D044315 1.5e-06 57.4 123 30.1


User provided reference genes

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