Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 1.9e-50 202.2 100 100.0
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 3.0e-48 194.9 100 96.0
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 2.9e-43 178.3 99 85.9
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 5.4e-42 174.1 99 84.8
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 4.6e-41 171.0 100 80.0
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 6.0e-41 170.6 99 82.8
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 7.8e-41 170.2 99 80.8
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 1.3e-40 169.5 95 84.2
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 1.7e-40 169.1 97 81.4
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 2.3e-40 168.7 99 79.8
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 2.3e-40 168.7 99 78.8
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 3.0e-40 168.3 99 79.8
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 3.9e-40 167.9 94 84.0
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 6.6e-40 167.2 95 82.1
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 8.6e-40 166.8 98 77.6
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 1.1e-39 166.4 96 80.2
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 1.5e-39 166.0 98 77.6
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 1.5e-39 166.0 99 79.8
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 1.5e-39 166.0 96 82.3
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 1.5e-39 166.0 94 83.0
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 1.9e-39 165.6 99 79.8
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 1.9e-39 165.6 97 80.4
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 1.9e-39 165.6 99 77.8
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 1.9e-39 165.6 99 75.8
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 2.5e-39 165.2 99 77.8
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 2.5e-39 165.2 99 77.8
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 3.3e-39 164.9 100 80.0
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 3.3e-39 164.9 99 75.8
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 3.3e-39 164.9 98 77.6
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 3.3e-39 164.9 99 79.8
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 4.3e-39 164.5 98 76.5
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 4.3e-39 164.5 95 82.1
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 4.3e-39 164.5 97 78.4
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 5.6e-39 164.1 100 80.0
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 7.3e-39 163.7 97 78.4
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 7.3e-39 163.7 97 78.4
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 7.3e-39 163.7 99 77.8
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 7.3e-39 163.7 97 77.3
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 9.5e-39 163.3 96 79.2
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 9.5e-39 163.3 99 77.8
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 9.5e-39 163.3 99 78.8
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 9.5e-39 163.3 99 77.8
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 1.2e-38 162.9 95 77.9
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 1.2e-38 162.9 95 77.9
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 1.2e-38 162.9 96 84.4
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 1.2e-38 162.9 100 80.0
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 1.2e-38 162.9 94 80.9
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.1e-38 162.2 99 77.8
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.1e-38 162.2 99 76.8
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 2.1e-38 162.2 99 77.8
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 2.1e-38 162.2 99 76.8
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 2.8e-38 161.8 92 80.4
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 2.8e-38 161.8 95 80.0
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 3.6e-38 161.4 96 77.1
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 3.6e-38 161.4 93 78.5
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 3.6e-38 161.4 97 76.3
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 4.7e-38 161.0 99 73.7
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 6.2e-38 160.6 95 80.0
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 6.2e-38 160.6 95 78.9
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 8.1e-38 160.2 91 81.3
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 8.1e-38 160.2 96 78.1
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 1.1e-37 159.8 98 73.5
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 1.4e-37 159.5 93 80.6
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 1.4e-37 159.5 94 76.6
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.8e-37 159.1 99 71.7
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 2.4e-37 158.7 91 80.2
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 2.4e-37 158.7 94 75.5
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 2.4e-37 158.7 92 80.4
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 2.4e-37 158.7 96 79.2
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 2.4e-37 158.7 103 76.7
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 3.1e-37 158.3 102 76.5
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 4.0e-37 157.9 94 77.7
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 4.0e-37 157.9 96 76.0
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 6.8e-37 157.1 96 76.0
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 8.9e-37 156.8 96 75.0
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 8.9e-37 156.8 96 75.0
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 8.9e-37 156.8 96 75.0
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 1.5e-36 156.0 87 81.6
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 1.5e-36 156.0 100 73.0
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 2.6e-36 155.2 94 74.5
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 4.4e-36 154.5 91 78.0
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 5.8e-36 154.1 98 76.5
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 7.6e-36 153.7 92 77.2
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 7.6e-36 153.7 93 73.1
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 9.9e-36 153.3 92 73.9
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 9.9e-36 153.3 90 75.6
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 1.3e-35 152.9 98 75.5
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 1.7e-35 152.5 115 67.0
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 2.2e-35 152.1 97 75.3
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 2.2e-35 152.1 90 74.4
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 2.9e-35 151.8 90 74.4
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 2.9e-35 151.8 90 74.4
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 2.9e-35 151.8 94 75.5
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 4.9e-35 151.0 91 73.6
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 4.9e-35 151.0 97 74.2
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 6.4e-35 150.6 92 76.1
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 6.4e-35 150.6 91 75.8
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.9e-34 149.1 96 72.9
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 2.4e-34 148.7 127 59.1
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 4.2e-34 147.9 114 64.9
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 5.4e-34 147.5 91 72.5
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 2.7e-33 145.2 95 67.4
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.5e-33 144.8 90 73.3
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 1.7e-32 142.5 86 75.6
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 2.3e-32 142.1 95 71.6
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 6.6e-32 140.6 83 74.7
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 1.5e-31 139.4 94 70.2
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 9.6e-31 136.7 98 65.3
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 9.6e-31 136.7 98 65.3
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 2.1e-30 135.6 96 64.6
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 3.6e-30 134.8 94 68.1
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 1.4e-29 132.9 82 70.7
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 6.4e-27 124.0 95 61.1
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 1.9e-26 122.5 66 84.8
Haze_02065 Corylus avellana HOM05D006255 ORTHO05D008014 2.1e-25 119.0 200 39.0
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 4.6e-25 117.9 67 79.1
C06p36040 Brassica napus HOM05D006255 ORTHO05D008014 1.7e-24 115.9 77 72.7
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 3.0e-24 115.2 96 59.4
BolC6t38725H Brassica oleracea HOM05D006255 ORTHO05D008014 4.8e-22 107.8 68 75.0
AUR62012975 Chenopodium quinoa HOM05D006255 ORTHO05D008014 1.3e-19 99.8 96 53.1
Gohir.A03G206650 Gossypium hirsutum HOM05D006255 ORTHO05D008014 8.4e-19 97.1 66 69.7
Ah.01g023450 Amaranthus hybridus HOM05D000939 ORTHO05D000745 2.4e-18 95.5 80 57.5
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 4.2e-18 94.7 94 48.9
Gorai.005G255900 Gossypium raimondii HOM05D006255 ORTHO05D008014 5.4e-18 94.4 66 68.2
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 4.6e-17 91.3 97 45.4
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 2.5e-15 85.5 88 50.0
CAN.G1235.32 Capsicum annuum HOM05D006255 ORTHO05D008014 4.5e-12 74.7 53 62.3
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 6.5e-11 70.9 96 44.8
BcaC08g45811 Brassica carinata HOM05D006255 ORTHO05D008014 1.6e-09 66.2 40 75.0
Cfa024524 Carpinus fangiana HOM05D006255 ORTHO05D008014 6.7e-08 60.8 78 44.9


User provided reference genes

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