Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 9.7e-130 466.8 241 100.0
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 1.2e-106 390.2 239 84.9
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 2.4e-104 382.5 239 82.8
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 4.1e-104 381.7 239 82.4
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 7.0e-104 380.9 239 81.6
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 4.6e-103 378.3 238 81.1
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 7.8e-103 377.5 239 79.1
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 1.0e-102 377.1 239 81.6
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 1.7e-102 376.3 239 81.2
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 2.3e-102 375.9 239 79.5
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 2.3e-102 375.9 240 80.0
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 2.5e-101 372.5 238 79.8
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 3.3e-101 372.1 239 80.8
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 7.3e-101 370.9 239 79.1
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 7.3e-101 370.9 238 79.8
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 9.5e-101 370.5 239 79.9
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 9.5e-101 370.5 239 79.9
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 9.5e-101 370.5 239 79.1
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 9.5e-101 370.5 239 78.7
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 1.2e-100 370.2 239 78.7
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 1.6e-100 369.8 239 80.3
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 1.6e-100 369.8 239 78.7
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 1.6e-100 369.8 239 78.7
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 1.6e-100 369.8 239 78.7
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 1.6e-100 369.8 239 78.7
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 2.1e-100 369.4 239 77.8
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 2.8e-100 369.0 239 78.2
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 3.6e-100 368.6 239 79.9
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 8.0e-100 367.5 239 78.2
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 1.0e-99 367.1 239 78.2
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 1.4e-99 366.7 239 78.2
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 1.8e-99 366.3 239 79.1
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 2.3e-99 365.9 240 78.8
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 2.3e-99 365.9 239 79.9
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 2.3e-99 365.9 239 79.5
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 3.1e-99 365.5 239 77.8
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 5.2e-99 364.8 240 77.1
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 6.8e-99 364.4 240 76.7
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 8.9e-99 364.0 239 76.2
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 8.9e-99 364.0 239 76.2
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 1.5e-98 363.2 239 79.1
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 2.0e-98 362.8 240 78.3
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 2.6e-98 362.5 239 76.2
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 4.4e-98 361.7 239 78.2
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 4.4e-98 361.7 239 78.7
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 5.8e-98 361.3 238 79.0
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 5.8e-98 361.3 239 78.2
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 1.7e-97 359.8 239 77.8
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 2.9e-97 359.0 239 77.8
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 4.9e-97 358.2 238 76.9
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 1.1e-96 357.1 238 76.9
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 1.9e-96 356.3 239 77.0
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 1.9e-96 356.3 239 77.8
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 2.4e-96 355.9 239 77.0
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 3.2e-96 355.5 239 76.6
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 3.2e-96 355.5 239 77.0
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 4.1e-96 355.1 238 77.7
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 7.0e-96 354.4 239 76.2
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 2.0e-95 352.8 240 77.1
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 2.7e-95 352.4 239 75.7
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 4.6e-95 351.7 239 76.2
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 6.0e-95 351.3 240 76.7
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.8e-95 350.9 239 76.2
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 7.8e-95 350.9 239 76.2
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 7.8e-95 350.9 239 75.7
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 1.0e-94 350.5 238 76.5
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 1.7e-94 349.7 239 75.3
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 6.6e-94 347.8 239 72.4
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 8.6e-94 347.4 239 76.6
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 2.5e-93 345.9 238 75.2
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 2.5e-93 345.9 239 74.5
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 4.3e-93 345.1 239 74.5
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 5.6e-93 344.7 238 74.8
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 7.3e-93 344.4 225 77.8
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.6e-92 343.2 238 73.5
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 1.8e-91 339.7 239 71.5
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 2.3e-91 339.3 239 76.2
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 8.9e-91 337.4 258 70.2
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 2.0e-90 336.3 238 73.1
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 7.5e-90 334.3 225 76.0
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 1.7e-89 333.2 238 72.7
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 3.7e-89 332.0 225 77.8
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 6.4e-89 331.3 238 71.4
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 7.1e-88 327.8 216 76.9
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 3.5e-87 325.5 239 73.6
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 7.8e-87 324.3 239 72.4
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 1.3e-86 323.6 224 75.9
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 1.7e-81 306.6 226 70.8
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 3.7e-81 305.4 210 74.3
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 1.9e-80 303.1 256 66.4
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 2.4e-80 302.8 205 77.1
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 2.7e-79 299.3 206 72.8
SGA_v2.0_scaffold29G12072 Striga asiatica HOM05D006407 ORTHO05D008079 4.3e-77 292.0 292 58.2
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 1.2e-76 290.4 215 69.8
HPP92_024262 Vanilla planifolia HOM05D006407 ORTHO05D008079 6.2e-76 288.1 204 72.1
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 3.4e-74 282.3 239 62.3
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 1.7e-73 280.0 178 80.3
Duzib138G1048 Durio zibethinus HOM05D006407 ORTHO05D008079 2.0e-66 256.5 246 58.1
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 3.0e-62 242.7 163 76.7
Nn1g08232 Nelumbo nucifera HOM05D006407 ORTHO05D008079 1.4e-59 233.8 159 76.1
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 1.2e-55 220.7 241 49.8
SMO367G1011 Selaginella moellendorffii HOM05D006407 ORTHO05D008079 1.8e-54 216.9 241 49.4
Pp3c19_21450 Physcomitrium patens HOM05D006407 ORTHO05D008079 1.6e-52 210.3 241 45.6
BcaC06g30794 Brassica carinata HOM05D006407 ORTHO05D008079 6.5e-49 198.4 240 50.0
BolC7t44437H Brassica oleracea HOM05D006407 ORTHO05D008079 7.9e-47 191.4 223 53.8
AUR62028699 Chenopodium quinoa HOM05D006407 ORTHO05D008079 1.8e-46 190.3 144 70.1
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 9.6e-45 184.5 160 59.4
DCAR_004768 Daucus carota HOM05D006407 ORTHO05D008079 6.3e-44 181.8 158 65.2
C07p39170 Brassica napus HOM05D006407 ORTHO05D008079 1.2e-42 177.6 215 50.2
unitig_62.g23866 Utricularia gibba HOM05D006407 ORTHO05D008079 2.0e-42 176.8 211 51.7
BraA06t26831Z Brassica rapa HOM05D006407 ORTHO05D008079 1.2e-39 167.5 133 66.2
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 8.5e-33 144.8 80 88.8
A06p39160 Brassica napus HOM05D006407 ORTHO05D008079 1.9e-32 143.7 177 49.2
CBR_g12604 Chara braunii HOM05D001724 ORTHO05D007284 1.1e-16 91.3 243 30.0
Oeu032606.1 Olea europaea HOM05D006407 ORTHO05D008079 1.5e-13 80.9 48 83.3
arahy.Tifrunner.gnm1.ann1.91BFZF Arachis hypogaea HOM05D006407 ORTHO05D008079 7.5e-13 78.6 88 52.3
arahy.Tifrunner.gnm1.ann1.6HQ4SR Arachis hypogaea HOM05D006407 ORTHO05D008079 1.2e-07 61.2 75 50.7
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 1.2e-07 61.2 216 27.8
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 2.7e-07 60.1 206 27.7


User provided reference genes

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