Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0401 Ceratophyllum demersum HOM05D000509 ORTHO05D006393 6.4e-67 257.3 132 100.0
MBI17_g24690_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 5.7e-23 111.3 125 51.2
Dinv41795 Davidia involucrata HOM05D000509 ORTHO05D006393 2.8e-22 109.0 129 51.2
TWI14G0500 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 9.1e-21 104.0 126 49.2
Potri.016G069200 Populus trichocarpa HOM05D000509 ORTHO05D006393 3.8e-19 98.6 130 49.2
Sabra02G0116600 Salix brachista HOM05D000509 ORTHO05D006393 3.8e-19 98.6 125 50.4
Actinidia12704 Actinidia chinensis HOM05D000509 ORTHO05D006393 1.1e-18 97.1 132 46.2
Nn6g33420 Nelumbo nucifera HOM05D000509 ORTHO05D006393 1.4e-18 96.7 137 48.2
Rhsim07G0117300 Rhododendron simsii HOM05D000509 ORTHO05D006393 1.4e-18 96.7 133 47.4
AUR62004883 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.9e-18 96.3 128 46.9
Thecc.04G199400 Theobroma cacao HOM05D000509 ORTHO05D006393 7.2e-18 94.4 123 47.2
Eucgr.B00993 Eucalyptus grandis HOM05D000509 ORTHO05D006393 1.2e-17 93.6 131 45.0
Actinidia33421 Actinidia chinensis HOM05D001542 ORTHO05D001416 2.1e-17 92.8 130 45.4
Eucgr.B00880 Eucalyptus grandis HOM05D000509 ORTHO05D006393 2.1e-17 92.8 131 45.0
CSS0014656 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 6.1e-17 91.3 127 44.1
Cpa.g.sc11.3 Carica papaya HOM05D000509 ORTHO05D006393 6.1e-17 91.3 125 43.2
CiPaw.02G030900 Carya illinoinensis HOM05D000509 ORTHO05D006393 8.0e-17 90.9 130 46.2
TAR636G2420 Trochodendron aralioides HOM05D000509 ORTHO05D006393 1.8e-16 89.7 124 47.6
Aqoxy2G02281 Aquilegia oxysepala HOM05D000509 ORTHO05D006393 2.3e-16 89.4 124 43.5
MBI17_g24691_MAGBIO Magnolia biondii HOM05D000509 ORTHO05D006393 2.3e-16 89.4 97 54.6
QL01p005382 Quercus lobata HOM05D000509 ORTHO05D006393 3.9e-16 88.6 126 46.0
QL93p0259_0027 Quercus lobata HOM05D000509 ORTHO05D006393 8.8e-16 87.4 126 45.2
Dinv32484 Davidia involucrata HOM05D000509 ORTHO05D006393 1.1e-15 87.0 119 47.1
Manes.07G019100 Manihot esculenta HOM05D000509 ORTHO05D006393 1.1e-15 87.0 132 44.7
VMungo1383G0114 Vigna mungo HOM05D000509 ORTHO05D006393 1.1e-15 87.0 125 44.0
CiPaw.01G061300 Carya illinoinensis HOM05D000509 ORTHO05D006393 1.5e-15 86.7 127 44.9
Gorai.005G030400 Gossypium raimondii HOM05D000509 ORTHO05D006393 2.0e-15 86.3 133 42.1
Rhsim07G0118400 Rhododendron simsii HOM05D000509 ORTHO05D006393 2.6e-15 85.9 126 46.0
Cc02_g38030 Coffea canephora HOM05D000509 ORTHO05D006393 3.3e-15 85.5 127 44.1
Gohir.D02G024500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 3.3e-15 85.5 133 41.4
Cfa003925 Carpinus fangiana HOM05D000509 ORTHO05D006393 5.7e-15 84.7 112 46.4
Gohir.A02G020500 Gossypium hirsutum HOM05D000509 ORTHO05D006393 5.7e-15 84.7 125 43.2
Gohir.A08G013720 Gossypium hirsutum HOM05D000509 ORTHO05D006393 5.7e-15 84.7 125 43.2
Manes.10G122200 Manihot esculenta HOM05D000509 ORTHO05D006393 7.4e-15 84.3 130 43.8
Ca_07920_v3 Cicer arietinum L. HOM05D000509 ORTHO05D006393 9.7e-15 84.0 128 40.6
VMungo0540G0837 Vigna mungo HOM05D000509 ORTHO05D006393 2.2e-14 82.8 126 42.1
Zm00001eb039300 Zea mays HOM05D000509 ORTHO05D006393 2.2e-14 82.8 127 40.9
Haze_15506 Corylus avellana HOM05D000509 ORTHO05D006393 2.8e-14 82.4 114 44.7
PGSC0003DMG400000042 Solanum tuberosum HOM05D000509 ORTHO05D006393 2.8e-14 82.4 128 42.2
TWI23G0635 Tripterygium wilfordii HOM05D000509 ORTHO05D006393 2.8e-14 82.4 125 45.6
Rhsim07G0117600 Rhododendron simsii HOM05D000509 ORTHO05D006393 3.7e-14 82.0 133 40.6
MSTRG.20833 Avicennia marina HOM05D000509 ORTHO05D006393 6.3e-14 81.3 127 41.7
EL10Ac8g20190 Beta vulgaris HOM05D000509 ORTHO05D006393 6.3e-14 81.3 137 41.6
CSS0014005 Camellia sinensis var. sinensis HOM05D000509 ORTHO05D006393 8.2e-14 80.9 128 41.4
GSVIVG01008341001 Vitis vinifera HOM05D000509 ORTHO05D006393 8.2e-14 80.9 125 43.2
Os08g0559700 Oryza sativa ssp. japonica HOM05D000509 ORTHO05D006393 1.1e-13 80.5 114 45.6
Prupe.2G170600 Prunus persica HOM05D000509 ORTHO05D006393 1.1e-13 80.5 128 41.4
Duzib151G0093 Durio zibethinus HOM05D000509 ORTHO05D006393 1.4e-13 80.1 125 40.8
MD07G1137000 Malus domestica HOM05D000509 ORTHO05D006393 1.4e-13 80.1 128 42.2
EL10Ac4g09051 Beta vulgaris HOM05D000509 ORTHO05D006393 1.8e-13 79.7 128 44.5
Lsat_1_v5_gn_8_97941 Lactuca sativa HOM05D002211 ORTHO05D002206 1.8e-13 79.7 126 41.3
Medtr8g095630 Medicago truncatula HOM05D000509 ORTHO05D006393 3.1e-13 79.0 128 39.8
Phvul.008G062400 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 3.1e-13 79.0 110 41.8
PGR042G3203 Punica granatum HOM05D000509 ORTHO05D006393 4.1e-13 78.6 109 45.9
Ah.04g163760 Amaranthus hybridus HOM05D000509 ORTHO05D006393 5.3e-13 78.2 124 44.4
Phvul.008G065500 Phaseolus vulgaris HOM05D000509 ORTHO05D006393 7.0e-13 77.8 114 40.4
SGA_v2.0_scaffold95G28834 Striga asiatica HOM05D000509 ORTHO05D006393 9.1e-13 77.4 131 40.5
Nitab4.5_0000583g0080 Nicotiana tabacum HOM05D000509 ORTHO05D006393 1.2e-12 77.0 127 39.4
DCAR_019105 Daucus carota HOM05D000509 ORTHO05D006393 1.6e-12 76.6 124 37.9
ECA233G2837 Erigeron canadensis HOM05D000509 ORTHO05D006393 2.0e-12 76.3 130 39.2
Glyma.18G233000 Glycine max HOM05D000509 ORTHO05D006393 2.6e-12 75.9 125 39.2
unitig_0.g1262 Utricularia gibba HOM05D000509 ORTHO05D006393 2.6e-12 75.9 132 39.4
Ciclev10022504m.g Citrus clementina HOM05D000509 ORTHO05D006393 3.5e-12 75.5 105 41.9
SalBow6G4776 Salvia bowleyana HOM05D000509 ORTHO05D006393 3.5e-12 75.5 132 40.2
Eucgr.L01454 Eucalyptus grandis HOM05D000509 ORTHO05D006393 4.5e-12 75.1 108 47.2
arahy.Tifrunner.gnm1.ann1.E8SAKG Arachis hypogaea HOM05D000509 ORTHO05D006393 5.9e-12 74.7 124 37.9
THA.LOC104798540 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 5.9e-12 74.7 129 41.1
CAN.G78.80 Capsicum annuum HOM05D000509 ORTHO05D006393 1.0e-11 73.9 129 38.8
HPP92_020794 Vanilla planifolia HOM05D000509 ORTHO05D006393 1.0e-11 73.9 124 37.9
arahy.Tifrunner.gnm1.ann1.NYL5F5 Arachis hypogaea HOM05D000509 ORTHO05D006393 1.3e-11 73.6 124 37.1
vmacro20943 Vaccinium macrocarpon HOM05D000509 ORTHO05D006393 1.3e-11 73.6 116 41.4
Lalb_Chr03g0038131 Lupinus albus HOM05D000509 ORTHO05D006393 1.7e-11 73.2 134 37.3
Psat3g108360 Pisum sativum HOM05D000509 ORTHO05D006393 1.7e-11 73.2 116 40.5
FvH4_7g14280 Fragaria vesca HOM05D000509 ORTHO05D006393 2.2e-11 72.8 123 40.7
Hund14886 Selenicereus undatus HOM05D000509 ORTHO05D006393 2.2e-11 72.8 130 42.3
Lj1g0015308 Lotus japonicus HOM05D000509 ORTHO05D006393 2.9e-11 72.4 131 38.2
Sed0001004 Sechium edule HOM05D000509 ORTHO05D006393 6.5e-11 71.2 140 37.9
Nitab4.5_0006762g0030 Nicotiana tabacum HOM05D000509 ORTHO05D006393 8.5e-11 70.9 135 37.8
AUR62001076 Chenopodium quinoa HOM05D000509 ORTHO05D006393 1.5e-10 70.1 144 35.4
Solyc01g094630.3 Solanum lycopersicum HOM05D000509 ORTHO05D006393 3.2e-10 68.9 130 37.7
FAN06G1484 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.2e-10 67.8 128 39.8
FAN06G3105 Fragaria x ananassa HOM05D000509 ORTHO05D006393 7.2e-10 67.8 128 39.8
MD01G1060700 Malus domestica HOM05D000509 ORTHO05D006393 7.2e-10 67.8 128 39.1
Prupe.1G174800 Prunus persica HOM05D000509 ORTHO05D006393 7.2e-10 67.8 127 37.0
THA.LOC104820589 Tarenaya hassleriana HOM05D000509 ORTHO05D006393 1.2e-09 67.0 125 39.2
Ah.12g064210 Amaranthus hybridus HOM05D000509 ORTHO05D006393 1.6e-09 66.6 106 41.5
HanXRQChr09g0257651 Helianthus annuus HOM05D000509 ORTHO05D006393 1.6e-09 66.6 106 43.4
QL08p048801 Quercus lobata HOM05D000509 ORTHO05D006393 2.1e-09 66.2 115 41.7
ATR0680G086 Amborella trichopoda HOM05D000509 ORTHO05D006393 2.7e-09 65.9 109 37.6
FAN03G2840 Fragaria x ananassa HOM05D000509 ORTHO05D006393 3.6e-09 65.5 123 39.0
Medtr7g077710 Medicago truncatula HOM05D000509 ORTHO05D006393 6.1e-09 64.7 99 43.4
CANSAT56G2260 Cannabis sativa HOM05D000509 ORTHO05D006393 8.0e-09 64.3 125 37.6
TPR.G37720 Trifolium pratense HOM05D000509 ORTHO05D006393 1.0e-08 63.9 112 40.2
A09p53420 Brassica napus HOM05D000509 ORTHO05D006393 2.3e-08 62.8 79 40.5
BraA09t40768Z Brassica rapa HOM05D000509 ORTHO05D006393 2.3e-08 62.8 79 40.5
Thhalv10006311m.g Eutrema salsugineum HOM05D000509 ORTHO05D006393 3.0e-08 62.4 79 40.5
SEGI_38599 Sequoiadendron giganteum HOM05D000509 ORTHO05D006393 3.0e-08 62.4 141 34.8
FAN10G1528 Fragaria x ananassa HOM05D000509 ORTHO05D006393 8.8e-08 60.8 123 37.4
FAN10G1645 Fragaria x ananassa HOM05D000509 ORTHO05D006393 8.8e-08 60.8 123 37.4
RcHm_v2.0_Chr1g0355271 Rosa chinensis HOM05D000509 ORTHO05D006393 1.5e-07 60.1 123 35.8
Glyma.09G259300 Glycine max HOM05D000509 ORTHO05D006393 2.6e-07 59.3 72 47.2
PSO478G1119 Papaver somniferum HOM05D000509 ORTHO05D006393 3.3e-07 58.9 73 43.8
C08p36230 Brassica napus HOM05D000509 ORTHO05D006393 4.4e-07 58.5 86 37.2
BolC8t51205H Brassica oleracea HOM05D000509 ORTHO05D006393 4.4e-07 58.5 86 37.2
CsaV3_6G000560 Cucumis sativus L. HOM05D000509 ORTHO05D006393 4.4e-07 58.5 143 35.7
Sopen01g038440 Solanum pennellii HOM05D000509 ORTHO05D006393 4.4e-07 58.5 128 34.4
BcaC02g10220 Brassica carinata HOM05D000509 ORTHO05D006393 2.2e-06 56.2 82 41.5
C04p31370 Brassica napus HOM05D000509 ORTHO05D006393 2.2e-06 56.2 82 41.5
MELO3C021209.2 Cucumis melo HOM05D000509 ORTHO05D006393 2.8e-06 55.8 141 34.8
QL10p007195 Quercus lobata HOM05D000509 ORTHO05D006393 4.8e-06 55.1 79 40.5
Sp5g02030 Schrenkiella parvula HOM05D000509 ORTHO05D006393 4.8e-06 55.1 80 40.0
GSVIVG01003391001 Vitis vinifera HOM05D000509 ORTHO05D006393 4.8e-06 55.1 107 38.3
COL.COLO4_20186 Corchorus olitorius HOM05D000509 ORTHO05D006393 6.3e-06 54.7 149 34.2


User provided reference genes

Program Settings