Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0372 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 4.0e-54 214.5 110 100.0
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 7.0e-35 150.6 160 56.2
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 3.8e-20 101.7 92 58.7
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 8.4e-20 100.5 92 59.8
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 4.1e-19 98.2 92 56.5
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 7.1e-19 97.4 115 50.4
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 6.6e-17 90.9 161 39.1
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 1.1e-16 90.1 119 44.5
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 1.5e-16 89.7 126 43.7
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 2.5e-16 89.0 88 53.4
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 4.3e-16 88.2 58 77.6
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 5.6e-16 87.8 77 61.0
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 5.6e-16 87.8 77 61.0
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 7.3e-16 87.4 87 57.5
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 9.6e-16 87.0 61 73.8
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 1.6e-15 86.3 58 72.4
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 2.1e-15 85.9 87 52.9
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 2.8e-15 85.5 84 53.6
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 3.6e-15 85.1 161 38.5
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 3.6e-15 85.1 73 60.3
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 3.6e-15 85.1 157 38.9
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 4.7e-15 84.7 137 41.6
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 6.2e-15 84.3 60 68.3
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 8.1e-15 84.0 156 38.5
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 1.1e-14 83.6 63 65.1
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 1.1e-14 83.6 60 70.0
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 1.1e-14 83.6 91 49.5
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 1.4e-14 83.2 133 38.3
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 1.4e-14 83.2 158 38.0
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 1.4e-14 83.2 159 35.8
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 2.4e-14 82.4 127 40.2
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 2.4e-14 82.4 86 55.8
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 2.4e-14 82.4 153 36.6
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 2.4e-14 82.4 79 54.4
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 3.1e-14 82.0 71 57.7
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 3.1e-14 82.0 71 57.7
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 3.1e-14 82.0 143 36.4
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 5.2e-14 81.3 71 63.4
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 5.2e-14 81.3 99 47.5
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 5.2e-14 81.3 72 56.9
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 5.2e-14 81.3 157 38.2
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 5.2e-14 81.3 64 65.6
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 5.2e-14 81.3 61 67.2
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 5.2e-14 81.3 61 67.2
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 5.2e-14 81.3 58 65.5
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 6.9e-14 80.9 58 67.2
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 6.9e-14 80.9 126 38.9
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 9.0e-14 80.5 143 35.7
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 1.2e-13 80.1 59 66.1
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 1.5e-13 79.7 73 61.6
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 1.5e-13 79.7 76 51.3
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 1.5e-13 79.7 74 58.1
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 2.0e-13 79.3 132 38.6
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 2.0e-13 79.3 78 52.6
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 2.6e-13 79.0 155 33.5
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 2.6e-13 79.0 57 66.7
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 2.6e-13 79.0 74 52.7
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 2.6e-13 79.0 91 46.2
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 2.6e-13 79.0 75 56.0
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 2.6e-13 79.0 73 57.5
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 3.4e-13 78.6 144 35.4
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 3.4e-13 78.6 76 52.6
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 3.4e-13 78.6 76 52.6
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 4.4e-13 78.2 63 65.1
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 4.4e-13 78.2 58 70.7
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 4.4e-13 78.2 74 60.8
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 5.8e-13 77.8 156 32.1
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 5.8e-13 77.8 71 56.3
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 5.8e-13 77.8 103 44.7
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 5.8e-13 77.8 137 35.0
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 7.6e-13 77.4 58 67.2
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 7.6e-13 77.4 127 36.2
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 7.6e-13 77.4 74 51.4
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 7.6e-13 77.4 74 51.4
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 7.6e-13 77.4 88 52.3
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 7.6e-13 77.4 58 63.8
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 7.6e-13 77.4 56 67.9
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 9.9e-13 77.0 77 55.8
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 9.9e-13 77.0 63 60.3
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 9.9e-13 77.0 90 48.9
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 9.9e-13 77.0 90 48.9
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 9.9e-13 77.0 65 58.5
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 1.3e-12 76.6 129 36.4
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 1.7e-12 76.3 127 36.2
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 1.7e-12 76.3 99 47.5
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 1.7e-12 76.3 57 64.9
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 1.7e-12 76.3 57 64.9
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 1.7e-12 76.3 58 63.8
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 2.2e-12 75.9 60 58.3
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 2.2e-12 75.9 72 59.7
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 2.2e-12 75.9 78 44.9
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 3.8e-12 75.1 151 35.1
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 3.8e-12 75.1 55 67.3
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 4.9e-12 74.7 59 57.6
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 6.4e-12 74.3 105 47.6
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 6.4e-12 74.3 60 61.7
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 8.4e-12 73.9 57 64.9
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 1.1e-11 73.6 59 61.0
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 1.4e-11 73.2 58 58.6
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 4.2e-11 71.6 127 33.9
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 1.6e-10 69.7 74 47.3
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 2.1e-10 69.3 129 35.7
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 3.5e-10 68.6 48 68.8
Cre13.g574150 Chlamydomonas reinhardtii HOM05D005510 ORTHO05D006750 1.0e-09 67.0 83 43.4
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 1.0e-09 67.0 61 57.4
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 1.3e-09 66.6 87 49.4
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 3.0e-09 65.5 133 35.3
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 5.3e-06 54.7 106 31.1


User provided reference genes

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