Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 2.4e-63 245.4 123 100.0
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 4.9e-45 184.5 106 87.7
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 4.8e-24 114.8 108 60.2
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 6.9e-23 110.9 109 56.9
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 1.5e-22 109.8 108 58.3
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 2.0e-22 109.4 110 57.3
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 3.4e-22 108.6 109 56.9
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 6.5e-21 104.4 107 57.9
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.5e-20 102.4 112 56.2
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 4.2e-20 101.7 108 56.5
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 7.2e-20 100.9 109 55.0
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 7.2e-20 100.9 111 54.1
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 9.3e-20 100.5 108 56.5
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 9.3e-20 100.5 108 56.5
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.2e-19 100.1 112 54.5
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.6e-19 99.8 110 53.6
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 2.1e-19 99.4 107 54.2
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 2.7e-19 99.0 107 55.1
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 3.6e-19 98.6 111 54.1
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 6.1e-19 97.8 111 56.8
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 2.3e-18 95.9 107 54.2
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 3.0e-18 95.5 108 52.8
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 5.1e-18 94.7 107 55.1
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 5.1e-18 94.7 109 52.3
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 6.7e-18 94.4 106 51.9
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 6.7e-18 94.4 106 51.9
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 8.8e-18 94.0 106 50.0
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 8.8e-18 94.0 106 52.8
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 8.8e-18 94.0 103 55.3
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 2.5e-17 92.4 110 51.8
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 2.5e-17 92.4 107 53.3
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 4.3e-17 91.7 107 53.3
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 7.4e-17 90.9 114 51.8
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 9.7e-17 90.5 107 51.4
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 1.3e-16 90.1 107 50.5
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 1.3e-16 90.1 110 50.9
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 1.7e-16 89.7 108 50.9
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 2.2e-16 89.4 107 53.3
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 2.8e-16 89.0 109 48.6
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 2.8e-16 89.0 107 50.5
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 4.8e-16 88.2 109 46.8
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 6.3e-16 87.8 111 51.4
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 8.2e-16 87.4 111 46.8
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 8.2e-16 87.4 75 54.7
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.1e-15 87.0 117 47.0
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 1.4e-15 86.7 108 49.1
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.4e-15 86.7 107 50.5
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.4e-15 86.7 93 52.7
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 1.4e-15 86.7 101 48.5
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 2.4e-15 85.9 114 50.0
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 2.4e-15 85.9 112 43.8
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 3.1e-15 85.5 110 48.2
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 3.1e-15 85.5 107 49.5
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 3.1e-15 85.5 107 50.5
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 5.3e-15 84.7 75 61.3
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 5.3e-15 84.7 110 47.3
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 6.9e-15 84.3 88 56.8
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 9.1e-15 84.0 117 46.2
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 9.1e-15 84.0 71 62.0
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.2e-14 83.6 86 54.7
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 1.5e-14 83.2 71 62.0
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.0e-14 82.8 111 47.7
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 2.0e-14 82.8 86 51.2
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 2.0e-14 82.8 108 50.0
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 2.0e-14 82.8 112 47.3
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 2.6e-14 82.4 76 59.2
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 3.4e-14 82.0 75 58.7
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 3.4e-14 82.0 82 51.2
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.5e-14 81.6 76 59.2
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.5e-14 81.6 76 59.2
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 4.5e-14 81.6 111 42.3
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 4.5e-14 81.6 44 86.4
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 7.7e-14 80.9 114 43.9
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 7.7e-14 80.9 100 47.0
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 1.0e-13 80.5 88 48.9
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 1.0e-13 80.5 79 58.2
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 1.0e-13 80.5 112 46.4
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.0e-13 80.5 79 58.2
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.7e-13 79.7 76 55.3
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 2.2e-13 79.3 71 60.6
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 2.2e-13 79.3 88 48.9
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 2.2e-13 79.3 76 59.2
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 2.2e-13 79.3 113 46.0
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 2.9e-13 79.0 114 44.7
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 2.9e-13 79.0 88 46.6
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 2.9e-13 79.0 108 46.3
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 5.0e-13 78.2 90 50.0
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 8.5e-13 77.4 88 48.9
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 8.5e-13 77.4 75 56.0
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.1e-12 77.0 109 41.3
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.1e-12 77.0 40 87.5
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 1.1e-12 77.0 100 48.0
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 1.9e-12 76.3 40 82.5
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 1.9e-12 76.3 41 85.4
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 1.9e-12 76.3 41 82.9
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 1.9e-12 76.3 39 89.7
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 1.9e-12 76.3 72 59.7
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 2.5e-12 75.9 79 50.6
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 2.5e-12 75.9 107 43.9
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 3.2e-12 75.5 75 57.3
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 3.2e-12 75.5 109 40.4
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 3.2e-12 75.5 103 47.6
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 4.2e-12 75.1 114 43.9
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 5.5e-12 74.7 109 44.0
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 5.5e-12 74.7 43 76.7
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 7.2e-12 74.3 76 46.1
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 7.2e-12 74.3 41 80.5
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 7.2e-12 74.3 39 87.2
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 9.4e-12 73.9 111 38.7
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 2.1e-11 72.8 74 55.4
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 2.7e-11 72.4 113 42.5
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 2.7e-11 72.4 113 42.5
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.7e-11 72.4 54 64.8
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 3.6e-11 72.0 109 38.5
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 6.1e-11 71.2 111 45.0
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 6.1e-11 71.2 114 43.9
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 1.0e-10 70.5 74 54.1
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 2.0e-09 66.2 44 68.2
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 3.7e-08 62.0 89 41.6
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 8.2e-08 60.8 78 39.7
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 8.2e-08 60.8 40 60.0
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 1.4e-07 60.1 35 68.6
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 1.8e-07 59.7 36 63.9


User provided reference genes

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