Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0289 Ceratophyllum demersum HOM05D000901 ORTHO05D004766 5.5e-127 457.6 223 100.0
TAR381G0201 Trochodendron aralioides HOM05D000901 ORTHO05D004766 3.0e-69 265.8 217 57.6
MBI05_g36763_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 3.7e-67 258.8 190 61.6
ATR0661G262 Amborella trichopoda HOM05D000901 ORTHO05D004766 4.1e-66 255.4 218 55.0
CSS0047191 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 7.0e-66 254.6 214 57.5
CSS0049889 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 9.2e-66 254.2 214 57.5
HPP92_026881 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.6e-65 253.4 221 57.5
HPP92_003483 Vanilla planifolia HOM05D000901 ORTHO05D004766 1.3e-64 250.4 221 56.6
Nitab4.5_0001936g0050 Nicotiana tabacum HOM05D000901 ORTHO05D004766 5.0e-64 248.4 213 57.7
HPP92_022203 Vanilla planifolia HOM05D000901 ORTHO05D004766 6.6e-64 248.1 201 58.7
Nn6g31933 Nelumbo nucifera HOM05D000901 ORTHO05D004766 1.1e-63 247.3 219 56.6
GSVIVG01008758001 Vitis vinifera HOM05D000901 ORTHO05D004766 1.5e-63 246.9 214 55.1
Peaxi162Scf00289g00084 Petunia axillaris HOM05D000901 ORTHO05D004766 1.9e-63 246.5 200 58.0
Lj4A800T39 Lonicera japonica HOM05D000901 ORTHO05D004766 2.5e-63 246.1 197 58.9
SEGI_34166 Sequoiadendron giganteum HOM05D000901 ORTHO05D004766 3.3e-63 245.7 216 53.2
Nitab4.5_0002730g0020 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.2e-62 243.8 213 55.9
Manes.05G143600 Manihot esculenta HOM05D000901 ORTHO05D004766 2.3e-61 239.6 192 59.4
EL10Ac1g02116 Beta vulgaris HOM05D000901 ORTHO05D004766 4.0e-61 238.8 200 57.0
DCAR_013891 Daucus carota HOM05D000901 ORTHO05D004766 6.8e-61 238.0 211 55.9
Peaxi162Scf00064g00828 Petunia axillaris HOM05D000901 ORTHO05D004766 6.8e-61 238.0 208 51.9
vmacro04376 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 6.8e-61 238.0 212 58.0
Thecc.08G049900 Theobroma cacao HOM05D000901 ORTHO05D004766 1.2e-60 237.3 221 54.3
CAN.G1517.1 Capsicum annuum HOM05D000901 ORTHO05D004766 1.5e-60 236.9 194 55.7
Nitab4.5_0000498g0060 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.5e-60 236.9 208 52.4
COL.COLO4_26098 Corchorus olitorius HOM05D000901 ORTHO05D004766 2.0e-60 236.5 220 54.1
Oeu048721.1 Olea europaea HOM05D000901 ORTHO05D004766 2.6e-60 236.1 198 57.1
vmacro21856 Vaccinium macrocarpon HOM05D000901 ORTHO05D004766 2.6e-60 236.1 209 54.1
CSS0010771 Camellia sinensis var. sinensis HOM05D000901 ORTHO05D004766 3.4e-60 235.7 199 55.8
PSO063G0231 Papaver somniferum HOM05D000901 ORTHO05D004766 4.4e-60 235.3 219 53.0
Potri.005G244400 Populus trichocarpa HOM05D000901 ORTHO05D004766 5.8e-60 235.0 215 54.4
Sabra05G0189000 Salix brachista HOM05D000901 ORTHO05D004766 5.8e-60 235.0 215 53.0
PGSC0003DMG400029329 Solanum tuberosum HOM05D000901 ORTHO05D004766 1.3e-59 233.8 215 50.2
Cfa013996 Carpinus fangiana HOM05D000901 ORTHO05D004766 1.7e-59 233.4 212 55.2
PSO782G4846 Papaver somniferum HOM05D000901 ORTHO05D004766 2.2e-59 233.0 218 53.7
CiPaw.07G144500 Carya illinoinensis HOM05D000901 ORTHO05D004766 2.9e-59 232.6 202 55.9
Aqoxy5G01833 Aquilegia oxysepala HOM05D000901 ORTHO05D004766 6.4e-59 231.5 213 52.1
Eucgr.F03719 Eucalyptus grandis HOM05D000901 ORTHO05D004766 6.4e-59 231.5 190 57.4
Gorai.010G001700 Gossypium raimondii HOM05D000901 ORTHO05D004766 8.3e-59 231.1 223 53.8
DCAR_013892 Daucus carota HOM05D000901 ORTHO05D004766 1.1e-58 230.7 213 54.5
HanXRQChr06g0184521 Helianthus annuus HOM05D000901 ORTHO05D004766 1.4e-58 230.3 212 53.3
Sc15g0004710 Simmondsia chinensis HOM05D000901 ORTHO05D004766 1.4e-58 230.3 219 52.5
Duzib041G0373 Durio zibethinus HOM05D000901 ORTHO05D004766 1.9e-58 229.9 220 54.1
Thecc.08G050000 Theobroma cacao HOM05D000901 ORTHO05D004766 1.9e-58 229.9 221 52.5
Actinidia37946 Actinidia chinensis HOM05D000901 ORTHO05D004766 3.2e-58 229.2 207 54.1
Solyc12g094380.2 Solanum lycopersicum HOM05D000901 ORTHO05D004766 4.1e-58 228.8 211 50.7
AUR62036698 Chenopodium quinoa HOM05D000901 ORTHO05D004766 5.4e-58 228.4 200 55.5
Sopen12g031260 Solanum pennellii HOM05D000901 ORTHO05D004766 9.2e-58 227.6 211 50.2
Hund05158 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.0e-57 226.5 217 51.2
Hund05161 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.0e-57 226.5 217 51.2
Hund01706 Selenicereus undatus HOM05D000901 ORTHO05D004766 2.7e-57 226.1 193 56.5
HanXRQChr14g0429411 Helianthus annuus HOM05D000901 ORTHO05D004766 6.0e-57 224.9 207 54.1
FvH4_2g38030 Fragaria vesca HOM05D000901 ORTHO05D004766 1.3e-56 223.8 213 51.6
ECA238G3494 Erigeron canadensis HOM05D000901 ORTHO05D004766 2.3e-56 223.0 196 55.1
Lj4A18T108 Lonicera japonica HOM05D000901 ORTHO05D004766 2.3e-56 223.0 208 52.4
Lsat_1_v5_gn_2_7381 Lactuca sativa HOM05D000901 ORTHO05D004766 3.0e-56 222.6 219 52.1
Ah.00g000720 Amaranthus hybridus HOM05D000901 ORTHO05D004766 3.9e-56 222.2 213 52.6
Migut.C00891 Erythranthe guttata HOM05D000901 ORTHO05D004766 6.6e-56 221.5 209 50.2
PGR031G2145 Punica granatum HOM05D000901 ORTHO05D004766 6.6e-56 221.5 222 51.8
TPR.G9568 Trifolium pratense HOM05D000901 ORTHO05D004766 6.6e-56 221.5 217 50.7
FAN20G3106 Fragaria x ananassa HOM05D000901 ORTHO05D004766 1.5e-55 220.3 218 50.9
Medtr0332s0020 Medicago truncatula HOM05D000901 ORTHO05D004766 2.5e-55 219.5 222 49.1
Glyma.04G021400 Glycine max HOM05D000901 ORTHO05D004766 3.3e-55 219.2 212 51.4
MD15G1007500 Malus domestica HOM05D000901 ORTHO05D004766 3.3e-55 219.2 213 51.2
Os04g0227500 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 9.5e-55 217.6 196 49.5
Potri.002G017500 Populus trichocarpa HOM05D000901 ORTHO05D004766 1.2e-54 217.2 207 53.6
Ca_11598_v3 Cicer arietinum L. HOM05D000901 ORTHO05D004766 1.6e-54 216.9 201 50.2
Sopen12g031250 Solanum pennellii HOM05D000901 ORTHO05D004766 1.6e-54 216.9 217 51.2
Ciclev10002332m.g Citrus clementina HOM05D000901 ORTHO05D004766 2.1e-54 216.5 194 54.6
MD08G1008700 Malus domestica HOM05D000901 ORTHO05D004766 2.8e-54 216.1 188 53.7
Prupe.1G360400 Prunus persica HOM05D000901 ORTHO05D004766 2.8e-54 216.1 220 50.9
Hund05157 Selenicereus undatus HOM05D000901 ORTHO05D004766 3.6e-54 215.7 210 50.5
Hund05162 Selenicereus undatus HOM05D000901 ORTHO05D004766 3.6e-54 215.7 210 50.5
VMungo1309G2869 Vigna mungo HOM05D002716 ORTHO05D003324 3.6e-54 215.7 212 49.5
DCAR_025124 Daucus carota HOM05D000901 ORTHO05D004766 4.7e-54 215.3 218 53.7
Zm00001eb103900 Zea mays HOM05D000901 ORTHO05D004766 4.7e-54 215.3 199 53.8
Psat7g082200 Pisum sativum HOM05D000901 ORTHO05D004766 6.2e-54 214.9 219 48.4
Nn5g30828 Nelumbo nucifera HOM05D000901 ORTHO05D004766 8.1e-54 214.5 219 48.9
Os09g0542200 Oryza sativa ssp. japonica HOM05D000901 ORTHO05D004766 1.1e-53 214.2 224 51.3
Glyma.04G021300 Glycine max HOM05D000901 ORTHO05D004766 1.4e-53 213.8 212 48.6
RcHm_v2.0_Chr6g0303571 Rosa chinensis HOM05D000901 ORTHO05D004766 2.3e-53 213.0 215 49.8
SGA_v2.0_scaffold145G36086 Striga asiatica HOM05D000901 ORTHO05D004766 5.2e-53 211.8 195 51.3
HPP92_025437 Vanilla planifolia HOM05D000901 ORTHO05D004766 6.8e-53 211.5 217 49.3
Cpa.g.sc26.277 Carica papaya HOM05D000901 ORTHO05D004766 1.2e-52 210.7 204 48.5
MSTRG.1154 Avicennia marina HOM05D000901 ORTHO05D004766 2.0e-52 209.9 218 49.5
MSTRG.1155 Avicennia marina HOM05D000901 ORTHO05D004766 2.0e-52 209.9 217 49.3
TWI56G0802 Tripterygium wilfordii HOM05D000901 ORTHO05D004766 2.0e-52 209.9 196 52.6
unitig_32.g11240 Utricularia gibba HOM05D000901 ORTHO05D004766 2.0e-52 209.9 189 53.4
PGR083G1908 Punica granatum HOM05D000901 ORTHO05D004766 2.6e-52 209.5 215 52.1
arahy.Tifrunner.gnm1.ann1.774XMB Arachis hypogaea HOM05D000901 ORTHO05D004766 5.8e-52 208.4 191 51.8
arahy.Tifrunner.gnm1.ann1.K685T3 Arachis hypogaea HOM05D000901 ORTHO05D004766 7.5e-52 208.0 191 51.8
AUR62013896 Chenopodium quinoa HOM05D000901 ORTHO05D004766 7.5e-52 208.0 221 49.3
Cc10_g01220 Coffea canephora HOM05D000901 ORTHO05D004766 7.5e-52 208.0 195 53.3
Lalb_Chr11g0061781 Lupinus albus HOM05D000901 ORTHO05D004766 7.5e-52 208.0 210 49.5
ClCG08G014120 Citrullus lanatus HOM05D000901 ORTHO05D004766 9.8e-52 207.6 209 49.8
Phvul.009G019200 Phaseolus vulgaris HOM05D000901 ORTHO05D004766 1.3e-51 207.2 216 46.8
QL02p012636 Quercus lobata HOM05D000901 ORTHO05D004766 1.3e-51 207.2 238 46.6
Eucgr.F01691 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.7e-51 206.8 190 53.7
Gohir.A06G001500 Gossypium hirsutum HOM05D000901 ORTHO05D004766 2.9e-51 206.1 169 58.0
CsaV3_2G024310 Cucumis sativus L. HOM05D000901 ORTHO05D004766 3.7e-51 205.7 210 48.6
Lj1g0003310 Lotus japonicus HOM05D000901 ORTHO05D004766 8.3e-51 204.5 220 49.5
Sed0006708 Sechium edule HOM05D000901 ORTHO05D004766 1.9e-50 203.4 188 52.7
CANSAT25G0446 Cannabis sativa HOM05D000901 ORTHO05D004766 2.4e-50 203.0 220 49.1
MELO3C011351.2 Cucumis melo HOM05D000901 ORTHO05D004766 3.2e-50 202.6 205 47.8
SalBow7G4280 Salvia bowleyana HOM05D000901 ORTHO05D004766 4.1e-50 202.2 195 49.2
Carub.0002s2290 Capsella rubella HOM05D000901 ORTHO05D004766 2.7e-49 199.5 216 47.7
Thhalv10019591m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 3.5e-49 199.1 214 47.7
Aa31LG4G6150 Aethionema arabicum HOM05D000901 ORTHO05D004766 6.0e-49 198.4 207 46.9
AT1G76020 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 1.5e-47 193.7 215 46.0
BolC2t09354H Brassica oleracea HOM05D000901 ORTHO05D004766 5.6e-47 191.8 212 48.1
BcaC03g15640 Brassica carinata HOM05D000901 ORTHO05D004766 7.3e-47 191.4 212 48.1
Sp5g31130 Schrenkiella parvula HOM05D000901 ORTHO05D004766 7.3e-47 191.4 212 48.1
C02p33510 Brassica napus HOM05D000901 ORTHO05D004766 9.5e-47 191.0 209 47.8
SMO137G0357 Selaginella moellendorffii HOM05D000901 ORTHO05D004766 1.2e-46 190.7 212 46.7
A02p20390 Brassica napus HOM05D000901 ORTHO05D004766 6.2e-46 188.3 212 47.6
BraA02t07071Z Brassica rapa HOM05D000901 ORTHO05D004766 6.2e-46 188.3 196 48.5
THA.LOC104813773 Tarenaya hassleriana HOM05D000901 ORTHO05D004766 1.1e-45 187.6 200 47.0
BcaC08g47093 Brassica carinata HOM05D000901 ORTHO05D004766 1.8e-45 186.8 212 47.6
C06p49920 Brassica napus HOM05D000901 ORTHO05D004766 2.0e-44 183.3 196 49.0
AT1G20225 Arabidopsis thaliana HOM05D000901 ORTHO05D004766 2.6e-44 183.0 207 44.9
A07p41510 Brassica napus HOM05D000901 ORTHO05D004766 3.4e-44 182.6 212 49.1
AL1G33070 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 5.8e-44 181.8 212 43.9
Carub.0001s1975 Capsella rubella HOM05D000901 ORTHO05D004766 7.6e-44 181.4 214 43.5
CARHR020720 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.3e-43 180.6 207 44.4
CARHR069550 Cardamine hirsuta HOM05D000901 ORTHO05D004766 1.7e-43 180.3 214 45.8
BcaC08g47306 Brassica carinata HOM05D000901 ORTHO05D004766 3.8e-43 179.1 196 48.5
BcaC08g47307 Brassica carinata HOM05D000901 ORTHO05D004766 3.8e-43 179.1 196 48.5
FAN27G1122 Fragaria x ananassa HOM05D000901 ORTHO05D001160 4.9e-43 178.7 176 51.7
AL2G36040 Arabidopsis lyrata HOM05D000901 ORTHO05D004766 6.4e-43 178.3 244 41.8
Rhsim06G0013400 Rhododendron simsii HOM05D000901 ORTHO05D004766 1.4e-42 177.2 176 49.4
Sp1g17990 Schrenkiella parvula HOM05D000901 ORTHO05D004766 1.9e-42 176.8 207 44.4
BcaB07g32030 Brassica carinata HOM05D000901 ORTHO05D004766 2.4e-42 176.4 196 43.4
BcaC05g25925 Brassica carinata HOM05D000901 ORTHO05D004766 7.1e-42 174.9 208 42.3
C05p18770 Brassica napus HOM05D000901 ORTHO05D004766 4.6e-41 172.2 207 42.0
BolC5t30582H Brassica oleracea HOM05D000901 ORTHO05D004766 6.0e-41 171.8 207 42.0
BolC6t40030H Brassica oleracea HOM05D000901 ORTHO05D004766 1.3e-40 170.6 214 44.9
Nitab4.5_0010135g0010 Nicotiana tabacum HOM05D000901 ORTHO05D004766 1.3e-40 170.6 195 44.1
A06p16340 Brassica napus HOM05D000901 ORTHO05D004766 3.0e-40 169.5 208 41.3
BraA06t24738Z Brassica rapa HOM05D000901 ORTHO05D004766 3.0e-40 169.5 196 41.8
Aa31LG7G4620 Aethionema arabicum HOM05D000901 ORTHO05D004766 3.9e-40 169.1 225 40.0
BraA07t31683Z Brassica rapa HOM05D000901 ORTHO05D004766 4.3e-39 165.6 215 43.7
SGA_v2.0_scaffold292G47381 Striga asiatica HOM05D000901 ORTHO05D004766 7.3e-39 164.9 221 42.5
Mapoly0103s0033 Marchantia polymorpha HOM05D000901 ORTHO05D004766 2.8e-38 162.9 215 42.3
MBI05_g08641_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 6.2e-38 161.8 131 57.3
Rhsim07G0249300 Rhododendron simsii HOM05D000901 ORTHO05D004766 3.1e-37 159.5 218 42.7
MBI05_g19938_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 5.2e-37 158.7 119 60.5
Pp3c23_11410 Physcomitrium patens HOM05D000901 ORTHO05D004766 8.4e-35 151.4 215 38.1
Dinv31885 Davidia involucrata HOM05D000901 ORTHO05D001160 1.1e-34 151.0 127 55.1
Actinidia29763 Actinidia chinensis HOM05D000901 ORTHO05D004766 7.1e-34 148.3 207 41.5
Psat7g082240 Pisum sativum HOM05D000901 ORTHO05D004766 1.6e-33 147.1 142 50.7
Oeu048720.1 Olea europaea HOM05D000901 ORTHO05D004766 3.5e-33 146.0 104 61.5
Thhalv10010046m.g Eutrema salsugineum HOM05D000901 ORTHO05D004766 2.8e-30 136.3 156 44.2
Zm00001eb419520 Zea mays HOM05D000901 ORTHO05D004766 2.8e-30 136.3 142 46.5
Eucgr.L01283 Eucalyptus grandis HOM05D000901 ORTHO05D004766 1.1e-26 124.4 102 57.8
CBR_g10910 Chara braunii HOM05D000901 ORTHO05D004766 1.2e-25 120.9 167 36.5
MSTRG.25272 Avicennia marina HOM05D000901 ORTHO05D004766 1.6e-25 120.6 116 50.9
BolC1t01801H Brassica oleracea HOM05D000901 ORTHO05D004766 3.5e-25 119.4 116 51.7
FAN15G2950 Fragaria x ananassa HOM05D000901 ORTHO05D001160 4.6e-25 119.0 176 42.0
AagrBONN_evm.TU.Sc2ySwM_228.1931 Anthoceros agrestis HOM05D000901 ORTHO05D004766 1.0e-24 117.9 149 40.3
MBI05_g47803_MAGBIO Magnolia biondii HOM05D000901 ORTHO05D004766 8.1e-22 108.2 91 52.7
Lj2g0002110 Lotus japonicus HOM05D000901 ORTHO05D004766 1.8e-21 107.1 142 41.5
Haze_22689 Corylus avellana HOM05D000901 ORTHO05D004766 1.2e-17 94.4 119 45.4
Ciclev10027478m.g Citrus clementina HOM05D000901 ORTHO05D004766 2.7e-17 93.2 82 58.5
Rhsim07G0249200 Rhododendron simsii HOM05D000901 ORTHO05D004766 3.5e-17 92.8 70 64.3
BcaC09g50963 Brassica carinata HOM05D000901 ORTHO05D004766 6.0e-17 92.0 91 51.6
BcaB05g24967 Brassica carinata HOM05D000901 ORTHO05D001160 7.9e-17 91.7 103 44.7
Haze_22688 Corylus avellana HOM05D000901 ORTHO05D004766 7.9e-17 91.7 95 46.3
CDE02G3279 Ceratophyllum demersum HOM05D000901 ORTHO05D128872 6.7e-16 88.6 67 67.2
BcaC01g02788 Brassica carinata HOM05D000901 ORTHO05D004766 2.1e-14 83.6 110 38.2
C03p50790 Brassica napus HOM05D000901 ORTHO05D004766 1.1e-13 81.3 110 37.3
CiPaw.07G144400 Carya illinoinensis HOM05D000901 ORTHO05D004766 1.1e-13 81.3 87 47.1
Eucgr.H01097 Eucalyptus grandis HOM05D000901 ORTHO05D004766 5.3e-13 79.0 63 55.6
AUR62036699 Chenopodium quinoa HOM05D000901 ORTHO05D004766 3.4e-12 76.3 103 39.8
C07p15020 Brassica napus HOM05D000901 ORTHO05D004766 2.2e-11 73.6 101 37.6
BolC6t40031H Brassica oleracea HOM05D000901 ORTHO05D004766 3.2e-10 69.7 131 34.4
BolC6t37476H Brassica oleracea HOM05D000901 ORTHO05D004766 3.0e-08 63.2 83 37.3
C03p60410 Brassica napus HOM05D000901 ORTHO05D004766 6.7e-08 62.0 85 37.6
BolC3t18302H Brassica oleracea HOM05D000901 ORTHO05D004766 2.8e-06 56.6 75 37.3


User provided reference genes

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