Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0274 Ceratophyllum demersum HOM05D007404 ORTHO05D009281 1.3e-132 476.5 248 100.0
Nn2g14440 Nelumbo nucifera HOM05D007404 ORTHO05D009281 2.5e-24 116.7 242 37.2
MBI14_g28309_MAGBIO Magnolia biondii HOM05D007404 ORTHO05D009281 4.8e-23 112.5 277 32.9
Nn2g14441 Nelumbo nucifera HOM05D007404 ORTHO05D009281 6.3e-23 112.1 253 35.6
CiPaw.10G021900 Carya illinoinensis HOM05D007404 ORTHO05D009281 4.1e-22 109.4 236 36.0
ClCG01G015070 Citrullus lanatus HOM05D007404 ORTHO05D009281 5.0e-20 102.4 234 35.5
Cfa020098 Carpinus fangiana HOM05D007404 ORTHO05D009281 1.1e-19 101.3 234 35.9
PGSC0003DMG400022875 Solanum tuberosum HOM05D007404 ORTHO05D009281 2.5e-19 100.1 245 31.4
Haze_20093 Corylus avellana HOM05D007404 ORTHO05D009281 4.2e-19 99.4 261 33.3
TWI74G0134 Tripterygium wilfordii HOM05D007404 ORTHO05D009281 7.2e-19 98.6 234 32.9
TAR623G1670 Trochodendron aralioides HOM05D007404 ORTHO05D009281 1.2e-18 97.8 227 34.8
Lsat_1_v5_gn_2_102100 Lactuca sativa HOM05D007404 ORTHO05D009281 1.6e-18 97.4 244 33.6
Hma1.2p1_0304F.1_g119261 Hydrangea macrophylla HOM05D007404 ORTHO05D009281 2.1e-18 97.1 230 35.7
Solyc11g045270.3 Solanum lycopersicum HOM05D007404 ORTHO05D009281 2.7e-18 96.7 258 26.7
MSTRG.19336 Avicennia marina HOM05D007404 ORTHO05D009281 4.6e-18 95.9 241 33.6
Nitab4.5_0012268g0010 Nicotiana tabacum HOM05D007404 ORTHO05D009281 6.1e-18 95.5 231 29.9
Aqoxy1G00574 Aquilegia oxysepala HOM05D007404 ORTHO05D009281 7.9e-18 95.1 235 33.6
CiPaw.09G024800 Carya illinoinensis HOM05D007404 ORTHO05D009281 1.0e-17 94.7 237 35.9
MELO3C024593.2 Cucumis melo HOM05D007404 ORTHO05D009281 1.0e-17 94.7 232 33.2
QL07p025963 Quercus lobata HOM05D007404 ORTHO05D009281 1.4e-17 94.4 229 33.2
Lj1C1059T6 Lonicera japonica HOM05D007404 ORTHO05D009281 1.8e-17 94.0 243 32.5
MD14G1045900 Malus domestica HOM05D007404 ORTHO05D009281 1.8e-17 94.0 237 33.8
Actinidia03848 Actinidia chinensis HOM05D007404 ORTHO05D009281 2.3e-17 93.6 246 32.9
ECA238G2201 Erigeron canadensis HOM05D007404 ORTHO05D009281 2.3e-17 93.6 238 37.4
FAN02G0840 Fragaria x ananassa HOM05D007404 ORTHO05D009281 2.3e-17 93.6 236 30.5
Prupe.7G088400 Prunus persica HOM05D007404 ORTHO05D009281 2.3e-17 93.6 242 33.5
Nitab4.5_0000117g0060 Nicotiana tabacum HOM05D007404 ORTHO05D009281 3.0e-17 93.2 256 29.7
Sopen11g020730 Solanum pennellii HOM05D007404 ORTHO05D009281 3.0e-17 93.2 262 28.6
CANSAT64G1742 Cannabis sativa HOM05D007404 ORTHO05D009281 3.9e-17 92.8 244 32.4
ATR0686G215 Amborella trichopoda HOM05D007404 ORTHO05D009281 6.7e-17 92.0 264 31.4
Atru.chr8.1254 Acer truncatum HOM05D007404 ORTHO05D009281 1.1e-16 91.3 260 32.7
Dinv25087 Davidia involucrata HOM05D007404 ORTHO05D009281 1.1e-16 91.3 231 32.0
Duzib093G1799 Durio zibethinus HOM05D007404 ORTHO05D009281 1.1e-16 91.3 239 33.1
RcHm_v2.0_Chr3g0477561 Rosa chinensis HOM05D007404 ORTHO05D009281 1.1e-16 91.3 238 33.6
Peaxi162Scf00211g00002 Petunia axillaris HOM05D007404 ORTHO05D009281 1.5e-16 90.9 260 30.8
Thecc.05G182600 Theobroma cacao HOM05D007404 ORTHO05D009281 2.0e-16 90.5 238 30.7
FvH4_6g21130 Fragaria vesca HOM05D007404 ORTHO05D009281 2.5e-16 90.1 237 30.4
Sed0004973 Sechium edule HOM05D007404 ORTHO05D009281 3.3e-16 89.7 243 31.7
COL.COLO4_29466 Corchorus olitorius HOM05D007404 ORTHO05D009281 4.3e-16 89.4 232 31.5
CsaV3_6G041180 Cucumis sativus L. HOM05D007404 ORTHO05D009281 5.7e-16 89.0 233 31.3
FAN05G3976 Fragaria x ananassa HOM05D007404 ORTHO05D009281 5.7e-16 89.0 237 32.1
FAN14G5090 Fragaria x ananassa HOM05D007404 ORTHO05D009281 7.4e-16 88.6 237 30.4
Cpa.g.sc222.4 Carica papaya HOM05D007404 ORTHO05D009281 1.3e-15 87.8 233 33.5
Manes.08G038100 Manihot esculenta HOM05D007404 ORTHO05D009281 1.3e-15 87.8 243 30.0
Gorai.002G232900 Gossypium raimondii HOM05D007404 ORTHO05D009281 1.7e-15 87.4 232 33.2
Ciclev10012555m.g Citrus clementina HOM05D007404 ORTHO05D009281 3.7e-15 86.3 260 28.1
CAN.G13.10 Capsicum annuum HOM05D007404 ORTHO05D009281 4.8e-15 85.9 245 28.6
Cc06_g07050 Coffea canephora HOM05D007404 ORTHO05D009281 1.1e-14 84.7 245 31.0
FAN09G0350 Fragaria x ananassa HOM05D007404 ORTHO05D009281 1.1e-14 84.7 240 30.4
Potri.006G198500 Populus trichocarpa HOM05D007404 ORTHO05D009281 1.1e-14 84.7 252 28.6
Ca_09089_v3 Cicer arietinum L. HOM05D007404 ORTHO05D009281 1.4e-14 84.3 61 63.9
Gohir.A01G199200 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.8e-14 84.0 233 32.2
PGR004G0377 Punica granatum HOM05D007404 ORTHO05D009281 2.4e-14 83.6 67 61.2
DCAR_013466 Daucus carota HOM05D007404 ORTHO05D009281 3.1e-14 83.2 239 32.2
Oeu063091.1 Olea europaea HOM05D007404 ORTHO05D009281 4.1e-14 82.8 248 32.7
arahy.Tifrunner.gnm1.ann1.T424Z8 Arachis hypogaea HOM05D007404 ORTHO05D009281 5.3e-14 82.4 248 28.6
Actinidia03958 Actinidia chinensis HOM05D007404 ORTHO05D009281 9.1e-14 81.6 65 58.5
Eucgr.A02534 Eucalyptus grandis HOM05D007404 ORTHO05D009281 9.1e-14 81.6 234 28.2
Hund10780 Selenicereus undatus HOM05D007404 ORTHO05D009281 9.1e-14 81.6 234 34.2
HanXRQChr14g0453181 Helianthus annuus HOM05D007404 ORTHO05D009281 2.0e-13 80.5 88 48.9
Phvul.001G199200 Phaseolus vulgaris HOM05D007404 ORTHO05D009281 2.0e-13 80.5 244 28.7
vmacro06064 Vaccinium macrocarpon HOM05D007404 ORTHO05D009281 2.6e-13 80.1 63 57.1
Lalb_Chr25g0287801 Lupinus albus HOM05D007404 ORTHO05D009281 5.9e-13 79.0 253 30.0
unitig_26.g9157 Utricularia gibba HOM05D000495 ORTHO05D009281 5.9e-13 79.0 244 28.7
Psat3g026720 Pisum sativum HOM05D007404 ORTHO05D009281 7.7e-13 78.6 61 59.0
Gohir.D01G189300 Gossypium hirsutum HOM05D007404 ORTHO05D009281 1.0e-12 78.2 66 54.5
TPR.G14403 Trifolium pratense HOM05D007404 ORTHO05D009281 1.0e-12 78.2 61 59.0
Rhsim03G0257900 Rhododendron simsii HOM05D007404 ORTHO05D009281 1.3e-12 77.8 58 60.3
Medtr7g107080 Medicago truncatula HOM05D007404 ORTHO05D009281 1.7e-12 77.4 234 29.9
Migut.J00747 Erythranthe guttata HOM05D007404 ORTHO05D009281 2.9e-12 76.6 227 30.0
Sabra06G0152600 Salix brachista HOM05D007404 ORTHO05D009281 2.9e-12 76.6 254 29.9
VMungo1383G2609 Vigna mungo HOM05D007404 ORTHO05D009281 2.9e-12 76.6 61 55.7
EL10Ac5g11794 Beta vulgaris HOM05D007404 ORTHO05D009281 5.0e-12 75.9 233 32.6
Glyma.03G205600 Glycine max HOM05D007404 ORTHO05D009281 5.0e-12 75.9 61 55.7
Glyma.19G203100 Glycine max HOM05D007404 ORTHO05D009281 5.0e-12 75.9 246 28.0
SGA_v2.0_scaffold112G31676 Striga asiatica HOM05D007404 ORTHO05D009281 2.5e-11 73.6 193 32.1
AUR62036300 Chenopodium quinoa HOM05D007404 ORTHO05D009281 3.2e-11 73.2 235 28.5
Lj1g0004547 Lotus japonicus HOM05D007404 ORTHO05D009281 3.2e-11 73.2 58 56.9
SEGI_39351 Sequoiadendron giganteum HOM05D007404 ORTHO05D009281 5.5e-11 72.4 63 54.0
AUR62038411 Chenopodium quinoa HOM05D007404 ORTHO05D009281 2.1e-10 70.5 233 28.8
THA.LOC104826786 Tarenaya hassleriana HOM05D007404 ORTHO05D009281 4.7e-10 69.3 241 29.9
Aa31LG3G5700 Aethionema arabicum HOM05D007404 ORTHO05D009281 5.1e-09 65.9 80 45.0
Sc07g0007250 Simmondsia chinensis HOM05D007404 ORTHO05D009281 6.7e-09 65.5 243 27.6
Ah.02g113930 Amaranthus hybridus HOM05D007404 ORTHO05D009281 8.8e-09 65.1 237 30.0
Dinv11908 Davidia involucrata HOM05D007404 ORTHO05D009281 1.5e-08 64.3 203 31.5
HPP92_023288 Vanilla planifolia HOM05D007404 ORTHO05D009281 2.6e-08 63.5 61 49.2
CARHR086420 Cardamine hirsuta HOM05D007404 ORTHO05D009281 7.4e-08 62.0 64 46.9
Sp3g10090 Schrenkiella parvula HOM05D007404 ORTHO05D009281 7.4e-08 62.0 64 45.3
Zm00001eb170760 Zea mays HOM05D007404 ORTHO05D009281 9.7e-08 61.6 234 28.2
AT3G11890 Arabidopsis thaliana HOM05D007404 ORTHO05D009281 1.3e-07 61.2 64 45.3
Carub.0003s1121 Capsella rubella HOM05D007404 ORTHO05D009281 1.7e-07 60.8 64 43.8
BcaB06g25568 Brassica carinata HOM05D007404 ORTHO05D009281 2.8e-07 60.1 64 43.8
BcaC05g29316 Brassica carinata HOM05D007404 ORTHO05D009281 2.8e-07 60.1 64 43.8
A05p37490 Brassica napus HOM05D007404 ORTHO05D009281 2.8e-07 60.1 64 43.8
C05p56050 Brassica napus HOM05D007404 ORTHO05D009281 2.8e-07 60.1 64 43.8
BolC5t34272H Brassica oleracea HOM05D007404 ORTHO05D009281 2.8e-07 60.1 64 43.8
BraA05t22547Z Brassica rapa HOM05D007404 ORTHO05D009281 2.8e-07 60.1 64 43.8
Thhalv10020684m.g Eutrema salsugineum HOM05D007404 ORTHO05D009281 3.7e-07 59.7 64 43.8
Os08g0378800 Oryza sativa ssp. japonica HOM05D007404 ORTHO05D009281 7.0e-06 55.5 64 40.6


User provided reference genes

Program Settings