Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0230 Ceratophyllum demersum HOM05D005336 ORTHO05D006511 1.8e-117 426.0 228 100.0
CDE11G0690 Ceratophyllum demersum HOM05D002676 ORTHO05D003194 7.2e-66 254.6 142 90.1
MBI12_g05895_MAGBIO Magnolia biondii HOM05D005336 ORTHO05D006511 3.0e-19 99.8 120 49.2
Haze_09222 Corylus avellana HOM05D005336 ORTHO05D006511 1.6e-17 94.0 132 42.4
Cfa011882 Carpinus fangiana HOM05D005336 ORTHO05D006511 3.1e-16 89.7 131 42.7
PSO675G0589 Papaver somniferum HOM05D005336 ORTHO05D006511 8.9e-16 88.2 145 38.6
CAN.G129.24 Capsicum annuum HOM05D005336 ORTHO05D006511 2.6e-15 86.7 119 39.5
Ca_00460_v3 Cicer arietinum L. HOM05D005336 ORTHO05D006511 3.4e-15 86.3 149 39.6
CSS0030685 Camellia sinensis var. sinensis HOM05D005336 ORTHO05D006511 5.8e-15 85.5 144 36.8
TPR.G4515 Trifolium pratense HOM05D005336 ORTHO05D006511 5.8e-15 85.5 125 40.0
Duzib068G0481 Durio zibethinus HOM05D005336 ORTHO05D006511 7.5e-15 85.1 132 39.4
PGR031G1780 Punica granatum HOM05D005336 ORTHO05D006511 7.5e-15 85.1 125 39.2
Manes.04G133300 Manihot esculenta HOM05D005336 ORTHO05D006511 9.8e-15 84.7 156 35.3
Lj6g0026446 Lotus japonicus HOM05D005336 ORTHO05D006511 1.3e-14 84.3 125 38.4
VMungo0720G3070 Vigna mungo HOM05D005336 ORTHO05D006511 1.7e-14 84.0 114 38.6
Sopen01g028460 Solanum pennellii HOM05D005336 ORTHO05D006511 2.2e-14 83.6 134 36.6
CsaV3_4G005910 Cucumis sativus L. HOM05D005336 ORTHO05D006511 2.9e-14 83.2 139 38.1
Glyma.01G146800 Glycine max HOM05D005336 ORTHO05D006511 3.7e-14 82.8 126 37.3
Glyma.10G112800 Glycine max HOM05D005336 ORTHO05D006511 3.7e-14 82.8 126 37.3
Nitab4.5_0000960g0060 Nicotiana tabacum HOM05D005336 ORTHO05D006511 3.7e-14 82.8 132 37.1
Nitab4.5_0008499g0040 Nicotiana tabacum HOM05D005336 ORTHO05D006511 3.7e-14 82.8 132 37.1
Duzib205G0686 Durio zibethinus HOM05D005336 ORTHO05D006511 4.9e-14 82.4 127 39.4
COL.COLO4_10851 Corchorus olitorius HOM05D005336 ORTHO05D006511 6.4e-14 82.0 123 38.2
Lj2P149T61 Lonicera japonica HOM05D005336 ORTHO05D006511 6.4e-14 82.0 143 37.8
MD06G1125100 Malus domestica HOM05D005336 ORTHO05D006511 6.4e-14 82.0 141 36.9
Dinv11470 Davidia involucrata HOM05D005336 ORTHO05D006511 8.3e-14 81.6 121 43.8
Duzib084G1128 Durio zibethinus HOM05D005336 ORTHO05D006511 8.3e-14 81.6 132 37.1
Glyma.15G085000 Glycine max HOM05D005336 ORTHO05D006511 8.3e-14 81.6 151 37.7
Dinv08689 Davidia involucrata HOM05D005336 ORTHO05D006511 1.1e-13 81.3 98 44.9
PGSC0003DMG400044996 Solanum tuberosum HOM05D005336 ORTHO05D006511 1.1e-13 81.3 135 37.8
Phvul.007G247100 Phaseolus vulgaris HOM05D005336 ORTHO05D006511 1.4e-13 80.9 132 37.1
CANSAT21G1898 Cannabis sativa HOM05D005336 ORTHO05D006511 1.9e-13 80.5 143 35.0
MELO3C016357.2 Cucumis melo HOM05D005336 ORTHO05D006511 1.9e-13 80.5 140 37.9
Nn3g18754 Nelumbo nucifera HOM05D005336 ORTHO05D006511 1.9e-13 80.5 142 38.0
Solyc01g066860.3 Solanum lycopersicum HOM05D005336 ORTHO05D006511 1.9e-13 80.5 134 35.8
Thecc.03G215000 Theobroma cacao HOM05D005336 ORTHO05D006511 1.9e-13 80.5 129 35.7
TWI15G0432 Tripterygium wilfordii HOM05D005336 ORTHO05D006511 1.9e-13 80.5 134 35.8
CSS0006649 Camellia sinensis var. sinensis HOM05D005336 ORTHO05D006511 2.4e-13 80.1 128 37.5
Glyma.13G227300 Glycine max HOM05D005336 ORTHO05D006511 3.2e-13 79.7 141 36.2
TAR375G0214 Trochodendron aralioides HOM05D005336 ORTHO05D006511 4.1e-13 79.3 144 37.5
ClCG07G008170 Citrullus lanatus HOM05D005336 ORTHO05D006511 5.4e-13 79.0 139 38.8
TWI81G0214 Tripterygium wilfordii HOM05D005336 ORTHO05D006511 9.2e-13 78.2 127 37.8
unitig_62.g23264 Utricularia gibba HOM05D005336 ORTHO05D006511 9.2e-13 78.2 132 34.8
Sabra11G0134200 Salix brachista HOM05D005336 ORTHO05D006511 1.2e-12 77.8 137 38.7
Medtr2g016680 Medicago truncatula HOM05D005336 ORTHO05D006511 1.6e-12 77.4 125 37.6
RcHm_v2.0_Chr7g0187911 Rosa chinensis HOM05D005336 ORTHO05D006511 1.6e-12 77.4 144 33.3
Peaxi162Scf00498g00079 Petunia axillaris HOM05D005336 ORTHO05D006511 2.1e-12 77.0 126 36.5
Phvul.006G173850 Phaseolus vulgaris HOM05D005336 ORTHO05D006511 2.1e-12 77.0 127 36.2
FvH4_5g10310 Fragaria vesca HOM05D005336 ORTHO05D006511 2.7e-12 76.6 136 32.4
FAN18G0874 Fragaria x ananassa HOM05D005336 ORTHO05D006511 2.7e-12 76.6 136 32.4
Lalb_Chr19g0129261 Lupinus albus HOM05D005336 ORTHO05D006511 3.5e-12 76.3 139 36.0
DCAR_023826 Daucus carota HOM05D005336 ORTHO05D006511 4.6e-12 75.9 129 34.9
VMungo0540G0063 Vigna mungo HOM05D005336 ORTHO05D006511 4.6e-12 75.9 114 37.7
PGSC0003DMG400037636 Solanum tuberosum HOM05D005336 ORTHO05D006511 1.0e-11 74.7 115 34.8
CiPaw.12G074100 Carya illinoinensis HOM05D005336 ORTHO05D006511 1.3e-11 74.3 132 34.8
CiPaw.11G108200 Carya illinoinensis HOM05D005336 ORTHO05D006511 2.3e-11 73.6 135 35.6
AUR62009906 Chenopodium quinoa HOM05D005336 ORTHO05D006511 2.3e-11 73.6 143 35.7
Gohir.A12G243100 Gossypium hirsutum HOM05D005336 ORTHO05D006511 2.3e-11 73.6 145 37.2
QL12p003217 Quercus lobata HOM05D005336 ORTHO05D006511 2.3e-11 73.6 115 38.3
Psat1g195600 Pisum sativum HOM05D005336 ORTHO05D006511 3.0e-11 73.2 139 34.5
Potri.001G452900 Populus trichocarpa HOM05D005336 ORTHO05D006511 3.0e-11 73.2 138 37.0
FAN08G3085 Fragaria x ananassa HOM05D005336 ORTHO05D006511 3.9e-11 72.8 142 31.7
Oeu026757.1 Olea europaea HOM05D005336 ORTHO05D006511 6.6e-11 72.0 133 36.1
Solyc12g099590.1 Solanum lycopersicum HOM05D005336 ORTHO05D006511 6.6e-11 72.0 130 34.6
Sopen12g034260 Solanum pennellii HOM05D005336 ORTHO05D006511 6.6e-11 72.0 129 34.9
FAN13G1264 Fragaria x ananassa HOM05D005336 ORTHO05D006511 1.1e-10 71.2 142 31.7
Prupe.5G135700 Prunus persica HOM05D005336 ORTHO05D006511 1.1e-10 71.2 133 33.8
Sabra16G0306000 Salix brachista HOM05D005336 ORTHO05D006511 1.5e-10 70.9 135 35.6
Gorai.003G073000 Gossypium raimondii HOM05D005336 ORTHO05D006511 1.9e-10 70.5 140 35.7
MD00G1118700 Malus domestica HOM05D005336 ORTHO05D006511 1.9e-10 70.5 154 32.5
Sed0023501 Sechium edule HOM05D005336 ORTHO05D006511 1.9e-10 70.5 121 40.5
Gorai.008G261600 Gossypium raimondii HOM05D005336 ORTHO05D006511 2.5e-10 70.1 128 38.3
Lsat_1_v5_gn_8_120821 Lactuca sativa HOM05D005336 ORTHO05D006511 2.5e-10 70.1 145 34.5
Gohir.D03G088700 Gossypium hirsutum HOM05D005336 ORTHO05D006511 4.3e-10 69.3 140 37.9
Gohir.D12G244100 Gossypium hirsutum HOM05D005336 ORTHO05D006511 5.6e-10 68.9 128 38.3
Potri.011G149100 Populus trichocarpa HOM05D005336 ORTHO05D006511 5.6e-10 68.9 133 33.1
Ah.15g095260 Amaranthus hybridus HOM05D005336 ORTHO05D006511 1.2e-09 67.8 148 35.8
HanXRQChr05g0144281 Helianthus annuus HOM05D005336 ORTHO05D006511 1.2e-09 67.8 147 33.3
SalBow1G3976 Salvia bowleyana HOM05D005336 ORTHO05D006511 1.2e-09 67.8 140 30.0
arahy.Tifrunner.gnm1.ann1.W1T8WI Arachis hypogaea HOM05D005336 ORTHO05D006511 1.6e-09 67.4 139 31.7
MSTRG.13689 Avicennia marina HOM05D005336 ORTHO05D006511 1.6e-09 67.4 144 34.0
ATR0579G028 Amborella trichopoda HOM05D005336 ORTHO05D006511 2.1e-09 67.0 152 35.5
FAN04G3153 Fragaria x ananassa HOM05D005336 ORTHO05D006511 2.1e-09 67.0 136 29.4
Gohir.A02G094800 Gossypium hirsutum HOM05D005336 ORTHO05D006511 2.1e-09 67.0 141 36.2
arahy.Tifrunner.gnm1.ann1.GG3QCC Arachis hypogaea HOM05D005336 ORTHO05D006511 3.6e-09 66.2 140 31.4
CARHR047990 Cardamine hirsuta HOM05D005336 ORTHO05D006511 3.6e-09 66.2 111 38.7
Ciclev10022546m.g Citrus clementina HOM05D005336 ORTHO05D006511 3.6e-09 66.2 150 32.0
SGA_v2.0_scaffold71G23936 Striga asiatica HOM05D005336 ORTHO05D006511 4.7e-09 65.9 126 32.5
Actinidia27276 Actinidia chinensis HOM05D005336 ORTHO05D006511 6.2e-09 65.5 119 36.1
Cc05_g01210 Coffea canephora HOM05D005336 ORTHO05D006511 6.2e-09 65.5 125 31.2
Lsat_1_v5_gn_4_127821 Lactuca sativa HOM05D005336 ORTHO05D006511 6.2e-09 65.5 136 33.1
AUR62001462 Chenopodium quinoa HOM05D005336 ORTHO05D006511 1.1e-08 64.7 143 32.2
AL2G11840 Arabidopsis lyrata HOM05D005336 ORTHO05D006511 1.4e-08 64.3 111 37.8
AT1G63310 Arabidopsis thaliana HOM05D005336 ORTHO05D006511 1.4e-08 64.3 111 37.8
Cpa.g.sc62.61 Carica papaya HOM05D005336 ORTHO05D006511 1.4e-08 64.3 113 37.2
Thhalv10023730m.g Eutrema salsugineum HOM05D005336 ORTHO05D006511 1.4e-08 64.3 117 35.9
SEGI_10606 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 1.4e-08 64.3 116 35.3
THA.LOC104798383 Tarenaya hassleriana HOM05D005336 ORTHO05D006511 1.8e-08 63.9 98 37.8
THA.LOC104798386 Tarenaya hassleriana HOM05D005336 ORTHO05D006511 1.8e-08 63.9 98 37.8
THA.LOC104809289 Tarenaya hassleriana HOM05D005336 ORTHO05D006511 1.8e-08 63.9 91 40.7
SGA_v2.0_scaffold99G29499 Striga asiatica HOM05D005336 ORTHO05D006511 2.3e-08 63.5 125 32.0
Ah.08g216960 Amaranthus hybridus HOM05D005336 ORTHO05D006511 4.0e-08 62.8 92 42.4
ECA233G5147 Erigeron canadensis HOM05D005336 ORTHO05D006511 4.0e-08 62.8 124 34.7
Actinidia04156 Actinidia chinensis HOM05D005336 ORTHO05D006511 6.8e-08 62.0 112 36.6
BcaB07g31399 Brassica carinata HOM05D005336 ORTHO05D006511 8.9e-08 61.6 111 36.0
Oeu011890.1 Olea europaea HOM05D005336 ORTHO05D006511 1.2e-07 61.2 86 37.2
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 1.2e-07 61.2 150 32.7
BraA09t37193Z Brassica rapa HOM05D005336 ORTHO05D006511 1.5e-07 60.8 126 32.5
Nitab4.5_0018124g0020 Nicotiana tabacum HOM05D005336 ORTHO05D006511 1.5e-07 60.8 110 32.7
Carub.0002s0149 Capsella rubella HOM05D005336 ORTHO05D006511 2.0e-07 60.5 111 35.1
Rhsim02G0255200 Rhododendron simsii HOM05D005336 ORTHO05D006511 2.0e-07 60.5 114 36.0
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 2.0e-07 60.5 141 34.0
Aa31sc221G90 Aethionema arabicum HOM05D005336 ORTHO05D006511 2.6e-07 60.1 111 36.9
A09p15530 Brassica napus HOM05D005336 ORTHO05D006511 2.6e-07 60.1 126 32.5
SalBow5G4925 Salvia bowleyana HOM05D005336 ORTHO05D006511 4.4e-07 59.3 118 33.9
SEGI_39402 Sequoiadendron giganteum HOM05D005336 ORTHO05D006511 4.4e-07 59.3 125 32.0
BcaC04g22699 Brassica carinata HOM05D005336 ORTHO05D006511 5.8e-07 58.9 112 35.7
C09p16280 Brassica napus HOM05D005336 ORTHO05D006511 5.8e-07 58.9 112 35.7
BolC9t54538H Brassica oleracea HOM05D005336 ORTHO05D006511 5.8e-07 58.9 112 35.7
BcaB01g01514 Brassica carinata HOM05D005336 ORTHO05D006511 7.6e-07 58.5 135 31.9
A09p28450 Brassica napus HOM05D005336 ORTHO05D006511 7.6e-07 58.5 135 31.1
Sp6g06720 Schrenkiella parvula HOM05D005336 ORTHO05D006511 9.9e-07 58.2 109 32.1
SEGI_05135 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 9.9e-07 58.2 100 37.0
C09p36020 Brassica napus HOM05D005336 ORTHO05D006511 1.3e-06 57.8 135 31.1
BolC9t56436H Brassica oleracea HOM05D005336 ORTHO05D006511 1.3e-06 57.8 135 31.1
BraA09t38410Z Brassica rapa HOM05D005336 ORTHO05D006511 1.3e-06 57.8 135 31.1
Thhalv10029291m.g Eutrema salsugineum HOM05D005336 ORTHO05D006511 1.3e-06 57.8 133 30.1
Sp2g01210 Schrenkiella parvula HOM05D005336 ORTHO05D006511 1.3e-06 57.8 111 32.4
BcaB07g31580 Brassica carinata HOM05D005336 ORTHO05D006511 1.7e-06 57.4 111 36.0
BcaC04g22484 Brassica carinata HOM05D005336 ORTHO05D006511 2.9e-06 56.6 125 31.2
BolC9t54780H Brassica oleracea HOM05D005336 ORTHO05D006511 2.9e-06 56.6 125 31.2
Zm00001eb418860 Zea mays HOM05D005336 ORTHO05D006511 2.9e-06 56.6 92 38.0
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 3.7e-06 56.2 138 26.1
A09p13620 Brassica napus HOM05D005336 ORTHO05D006511 3.7e-06 56.2 113 33.6
C09p18780 Brassica napus HOM05D005336 ORTHO05D006511 3.7e-06 56.2 125 32.0
BraA09t37015Z Brassica rapa HOM05D005336 ORTHO05D006511 3.7e-06 56.2 113 33.6
Actinidia22234 Actinidia chinensis HOM05D005336 ORTHO05D006511 6.4e-06 55.5 89 40.4


User provided reference genes

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