Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0200 Ceratophyllum demersum HOM05D007704 ORTHO05D009758 4.5e-138 494.6 251 100.0
TAR626G0172 Trochodendron aralioides HOM05D007704 ORTHO05D009758 1.6e-42 177.2 247 43.3
Nn3g20648 Nelumbo nucifera HOM05D007704 ORTHO05D009758 1.3e-39 167.5 239 44.4
GSVIVG01020855001 Vitis vinifera HOM05D007704 ORTHO05D009758 3.1e-38 162.9 254 40.6
QL08p044652 Quercus lobata HOM05D007704 ORTHO05D009758 2.2e-36 156.8 277 35.7
Aqoxy4G00112 Aquilegia oxysepala HOM05D007704 ORTHO05D009758 2.9e-36 156.4 247 38.5
Ciclev10032332m.g Citrus clementina HOM05D007704 ORTHO05D009758 3.8e-36 156.0 245 38.8
Potri.002G058800 Populus trichocarpa HOM05D007704 ORTHO05D009758 6.5e-36 155.2 244 38.1
ATR0757G094 Amborella trichopoda HOM05D007704 ORTHO05D009758 8.5e-36 154.8 269 37.5
MBI07_g07812_MAGBIO Magnolia biondii HOM05D007704 ORTHO05D009758 4.2e-35 152.5 240 39.2
MSTRG.15037 Avicennia marina HOM05D007704 ORTHO05D009758 1.2e-34 151.0 245 38.4
COL.COLO4_08458 Corchorus olitorius HOM05D007704 ORTHO05D009758 1.8e-33 147.1 240 38.3
Sabra02G0047700 Salix brachista HOM05D007704 ORTHO05D009758 1.8e-33 147.1 270 35.9
Gohir.A05G379900 Gossypium hirsutum HOM05D007704 ORTHO05D009758 1.2e-32 144.4 235 38.3
Atru.chr6.2068_Atru.chr6.2069 Acer truncatum HOM05D007704 ORTHO05D009758 2.0e-32 143.7 242 36.4
Thecc.01G163800 Theobroma cacao HOM05D007704 ORTHO05D009758 2.0e-32 143.7 234 40.2
TWI59G0036 Tripterygium wilfordii HOM05D007704 ORTHO05D009758 3.4e-32 142.9 244 37.3
Gohir.D04G035566 Gossypium hirsutum HOM05D007704 ORTHO05D009758 9.8e-32 141.4 235 37.0
Gorai.012G040100 Gossypium raimondii HOM05D007704 ORTHO05D009758 1.7e-31 140.6 235 37.0
HPP92_003909 Vanilla planifolia HOM05D007704 ORTHO05D009758 8.3e-31 138.3 229 37.6
Migut.M00569 Erythranthe guttata HOM05D007704 ORTHO05D009758 1.0e-28 131.3 247 36.8
Sopen12g006550 Solanum pennellii HOM05D007704 ORTHO05D009758 1.3e-28 131.0 238 36.6
SGA_v2.0_scaffold70G23621 Striga asiatica HOM05D007704 ORTHO05D009758 3.8e-28 129.4 247 35.2
Os01g0246500 Oryza sativa ssp. japonica HOM05D007704 ORTHO05D009758 5.0e-28 129.0 245 36.7
Solyc12g011190.2 Solanum lycopersicum HOM05D007704 ORTHO05D009758 6.5e-28 128.6 237 35.9
Cc05_g09660 Coffea canephora HOM05D007704 ORTHO05D009758 8.5e-28 128.3 255 34.1
PGSC0003DMG400007847 Solanum tuberosum HOM05D007704 ORTHO05D009758 1.5e-27 127.5 238 35.3
AUR62000092 Chenopodium quinoa HOM05D007704 ORTHO05D009758 1.9e-27 127.1 240 33.8
Peaxi162Scf00789g00013 Petunia axillaris HOM05D007704 ORTHO05D009758 4.2e-27 125.9 238 35.7
Zm00001eb118790 Zea mays HOM05D007704 ORTHO05D009758 5.5e-27 125.6 248 35.1
Nitab4.5_0001232g0110 Nicotiana tabacum HOM05D007704 ORTHO05D009758 3.0e-25 119.8 238 34.9
Hund07540 Selenicereus undatus HOM05D008449 ORTHO05D010615 4.0e-25 119.4 242 33.1
Sc16g0011630 Simmondsia chinensis HOM05D007704 ORTHO05D009758 4.0e-25 119.4 232 34.9
EL10Ac4g10303 Beta vulgaris HOM05D007704 ORTHO05D009758 1.0e-20 104.8 241 30.3
Ah.06g193590 Amaranthus hybridus HOM05D003002 ORTHO05D003583 6.6e-20 102.1 245 29.4
AUR62019264 Chenopodium quinoa HOM05D007704 ORTHO05D009758 1.8e-17 94.0 291 28.5
VMungo0540G0710 Vigna mungo HOM05D007704 ORTHO05D009758 4.0e-17 92.8 171 34.5
Haze_13518 Corylus avellana HOM05D007704 ORTHO05D009758 1.5e-16 90.9 190 32.6
unitig_85.g27396 Utricularia gibba HOM05D007704 ORTHO05D009758 2.6e-16 90.1 230 28.3
arahy.Tifrunner.gnm1.ann1.I86J5P Arachis hypogaea HOM05D007704 ORTHO05D009758 5.7e-16 89.0 176 34.7
Glyma.08G308800 Glycine max HOM05D007704 ORTHO05D009758 5.7e-16 89.0 175 33.7
Aqoxy4G03087 Aquilegia oxysepala HOM05D007704 ORTHO05D009758 1.3e-15 87.8 61 62.3
SEGI_16323 Sequoiadendron giganteum HOM05D007704 ORTHO05D009758 1.7e-15 87.4 201 31.3
Glyma.18G107800 Glycine max HOM05D007704 ORTHO05D009758 6.4e-15 85.5 145 35.2
FvH4_6g38470 Fragaria vesca HOM05D007704 ORTHO05D009758 8.3e-15 85.1 168 31.0
Prupe.3G174900 Prunus persica HOM05D007704 ORTHO05D009758 8.3e-15 85.1 160 32.5
FAN02G0747 Fragaria x ananassa HOM05D007704 ORTHO05D009758 1.4e-14 84.3 167 32.9
THA.LOC104800828 Tarenaya hassleriana HOM05D007704 ORTHO05D009758 1.4e-14 84.3 149 30.9
MD17G1137700 Malus domestica HOM05D007704 ORTHO05D009758 1.8e-14 84.0 160 32.5
FAN09G1582 Fragaria x ananassa HOM05D007704 ORTHO05D009758 3.2e-14 83.2 174 30.5
arahy.Tifrunner.gnm1.ann1.Q0GQHR Arachis hypogaea HOM05D007704 ORTHO05D009758 4.1e-14 82.8 176 33.5
Medtr3g047590 Medicago truncatula HOM05D007704 ORTHO05D009758 9.2e-14 81.6 184 32.6
Phvul.006G032200 Phaseolus vulgaris HOM05D007704 ORTHO05D009758 9.2e-14 81.6 149 33.6
Eucgr.A01992 Eucalyptus grandis HOM05D007704 ORTHO05D009758 1.6e-13 80.9 168 32.1
Ca_14608_v3 Cicer arietinum L. HOM05D007704 ORTHO05D009758 2.0e-13 80.5 153 32.0
FvH4_6g38482 Fragaria vesca HOM05D007704 ORTHO05D009758 2.7e-13 80.1 159 31.4
FAN14G3331 Fragaria x ananassa HOM05D007704 ORTHO05D009758 2.7e-13 80.1 159 31.4
Mapoly0023s0099 Marchantia polymorpha HOM05D007704 ORTHO05D009758 2.7e-13 80.1 140 32.9
Psat0s3897g0040 Pisum sativum HOM05D007704 ORTHO05D009758 2.7e-13 80.1 127 35.4
RcHm_v2.0_Chr2g0151721 Rosa chinensis HOM05D007704 ORTHO05D009758 7.8e-13 78.6 160 31.2
Sed0015338 Sechium edule HOM05D007704 ORTHO05D009758 1.0e-12 78.2 165 32.7
Gohir.D03G060100 Gossypium hirsutum HOM05D007704 ORTHO05D009758 3.0e-12 76.6 66 51.5
Cpa.g.sc50.98 Carica papaya HOM05D007704 ORTHO05D009758 3.9e-12 76.3 165 30.9
HPP92_003903 Vanilla planifolia HOM05D007704 ORTHO05D009758 3.9e-12 76.3 149 33.6
TPR.G16762 Trifolium pratense HOM05D007704 ORTHO05D009758 6.6e-12 75.5 178 27.5
Gorai.003G063900 Gossypium raimondii HOM05D007704 ORTHO05D009758 1.5e-11 74.3 66 54.5
AagrBONN_evm.TU.Sc2ySwM_344.3472 Anthoceros agrestis HOM05D007704 ORTHO05D009758 5.6e-11 72.4 221 25.3
DCAR_013319 Daucus carota HOM05D007704 ORTHO05D009758 5.6e-11 72.4 220 27.3
A09p66950 Brassica napus HOM05D000230 ORTHO05D000176 9.5e-11 71.6 123 32.5
BraA09t42030Z Brassica rapa HOM05D000230 ORTHO05D000176 9.5e-11 71.6 123 32.5
C08p51180 Brassica napus HOM05D007704 ORTHO05D009758 1.2e-10 71.2 123 31.7
BolC8t52645H Brassica oleracea HOM05D000230 ORTHO05D000176 1.2e-10 71.2 123 31.7
CAN.G164.19 Capsicum annuum HOM05D007704 ORTHO05D009758 1.2e-10 71.2 71 49.3
PGR042G3448 Punica granatum HOM05D007704 ORTHO05D009758 2.1e-10 70.5 159 32.1
CDE02G3352 Ceratophyllum demersum HOM05D000427 ORTHO05D000386 3.6e-10 69.7 46 84.8
Thhalv10009066m.g Eutrema salsugineum HOM05D007704 ORTHO05D009758 3.6e-10 69.7 121 36.4
Carub.0001s0586 Capsella rubella HOM05D007704 ORTHO05D009758 1.0e-09 68.2 140 30.7
Eucgr.A02009 Eucalyptus grandis HOM05D007704 ORTHO05D009758 1.4e-09 67.8 143 30.1
CAN.G164.20 Capsicum annuum HOM05D007704 ORTHO05D009758 2.3e-09 67.0 150 30.7
Sp1g05260 Schrenkiella parvula HOM05D007704 ORTHO05D009758 5.2e-09 65.9 121 32.2
Eucgr.A01996 Eucalyptus grandis HOM05D007704 ORTHO05D009758 1.5e-08 64.3 143 30.8
BcaC07g42062 Brassica carinata HOM05D007704 ORTHO05D009758 2.0e-08 63.9 121 32.2
AL1G16520 Arabidopsis lyrata HOM05D007704 ORTHO05D009758 2.6e-08 63.5 151 27.8
Lj6g0009873 Lotus japonicus HOM05D007704 ORTHO05D009758 2.6e-08 63.5 220 25.0
THA.LOC104827393 Tarenaya hassleriana HOM05D007704 ORTHO05D009758 2.6e-08 63.5 122 31.1
FAN05G1345 Fragaria x ananassa HOM05D007704 ORTHO05D009758 3.4e-08 63.2 111 33.3
HPP92_003904 Vanilla planifolia HOM05D007704 ORTHO05D009758 7.5e-08 62.0 43 58.1
AT1G06500 Arabidopsis thaliana HOM05D007704 ORTHO05D009758 2.2e-07 60.5 151 27.8
CARHR006110 Cardamine hirsuta HOM05D007704 ORTHO05D009758 2.2e-07 60.5 154 25.3


User provided reference genes

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