Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0185 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 3.7e-175 618.2 341 100.0
CDE02G3050 Ceratophyllum demersum HOM05D005773 ORTHO05D006930 1.2e-146 523.5 342 83.6
MBI19_g30285_MAGBIO Magnolia biondii HOM05D005773 ORTHO05D006930 3.8e-47 193.0 355 42.0
Dinv24720 Davidia involucrata HOM05D005773 ORTHO05D006930 2.2e-42 177.2 281 44.5
TAR633G1051 Trochodendron aralioides HOM05D005773 ORTHO05D006930 6.3e-42 175.6 316 38.0
Aqoxy2G02493 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.2e-40 171.4 387 38.5
RcHm_v2.0_Chr4g0427881 Rosa chinensis HOM05D005773 ORTHO05D006930 2.3e-39 167.2 356 41.0
MD13G1156700 Malus domestica HOM05D005773 ORTHO05D006930 5.0e-39 166.0 389 36.8
Nn3g21943 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.1e-38 164.9 358 40.2
Rhsim04G0249100 Rhododendron simsii HOM05D005773 ORTHO05D006930 1.9e-38 164.1 391 37.3
PSO210G3229 Papaver somniferum HOM05D005773 ORTHO05D006930 7.3e-38 162.2 354 40.1
QL06p014502 Quercus lobata HOM05D005773 ORTHO05D006930 1.2e-37 161.4 389 36.0
Lsat_1_v5_gn_6_118320 Lactuca sativa HOM05D005773 ORTHO05D006930 2.1e-37 160.6 304 38.2
CSS0030034 Camellia sinensis var. sinensis HOM05D005773 ORTHO05D006930 4.7e-37 159.5 302 38.4
Manes.03G212700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.4e-36 157.9 342 36.3
SalBow7G4520 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.4e-36 157.9 268 40.7
SalBow7G0248 Salvia bowleyana HOM05D005773 ORTHO05D006930 1.8e-36 157.5 265 40.8
MSTRG.14719 Avicennia marina HOM05D005773 ORTHO05D006930 1.2e-35 154.8 273 36.6
Nn4g25353 Nelumbo nucifera HOM05D005773 ORTHO05D006930 1.5e-35 154.5 310 35.2
Prupe.1G103600 Prunus persica HOM05D005773 ORTHO05D006930 2.0e-35 154.1 388 38.7
BcaB04g17451 Brassica carinata HOM05D005773 ORTHO05D006930 9.8e-35 151.8 360 36.9
GSVIVG01017699001 Vitis vinifera HOM05D005773 ORTHO05D006930 4.9e-34 149.4 306 36.9
CiPaw.01G128000 Carya illinoinensis HOM05D005773 ORTHO05D006930 1.1e-33 148.3 265 37.0
Nitab4.5_0000978g0060 Nicotiana tabacum HOM05D005773 ORTHO05D006930 2.4e-33 147.1 406 33.5
FAN07G0153 Fragaria x ananassa HOM05D005773 ORTHO05D006930 4.1e-33 146.4 349 39.5
HanXRQChr05g0148961 Helianthus annuus HOM05D005773 ORTHO05D006930 5.4e-33 146.0 355 35.5
Ciclev10005574m.g Citrus clementina HOM05D005773 ORTHO05D006930 2.0e-32 144.1 275 35.3
TWI53G0973 Tripterygium wilfordii HOM05D005773 ORTHO05D006930 2.7e-32 143.7 345 36.2
Hund12260 Selenicereus undatus HOM05D005773 ORTHO05D006930 3.5e-32 143.3 383 33.2
Cc03_g00040 Coffea canephora HOM05D005773 ORTHO05D006930 1.0e-31 141.7 305 35.1
Lalb_Chr13g0299011 Lupinus albus HOM05D005773 ORTHO05D006930 1.0e-31 141.7 324 37.7
Aa31LG10G5470 Aethionema arabicum HOM05D005773 ORTHO05D006930 1.3e-31 141.4 367 31.3
FvH4_4g21650 Fragaria vesca HOM05D005773 ORTHO05D006930 1.3e-31 141.4 362 37.8
MSTRG.13210 Avicennia marina HOM05D005773 ORTHO05D006930 1.7e-31 141.0 280 35.0
FAN17G1594 Fragaria x ananassa HOM05D005773 ORTHO05D006930 3.9e-31 139.8 358 37.4
MD16G1134300 Malus domestica HOM05D005773 ORTHO05D006930 3.9e-31 139.8 391 35.0
Oeu012285.1 Olea europaea HOM05D005773 ORTHO05D006930 5.0e-31 139.4 386 32.1
Potri.010G003200 Populus trichocarpa HOM05D005773 ORTHO05D006930 5.0e-31 139.4 321 36.8
Actinidia18514 Actinidia chinensis HOM05D005773 ORTHO05D006930 8.6e-31 138.7 300 36.7
A08p04910 Brassica napus HOM05D005773 ORTHO05D006930 8.6e-31 138.7 357 36.4
BraA08t32517Z Brassica rapa HOM05D005773 ORTHO05D006930 8.6e-31 138.7 357 36.4
Sabra10G0002700 Salix brachista HOM05D005773 ORTHO05D006930 2.5e-30 137.1 323 35.0
CAN.G484.97 Capsicum annuum HOM05D005773 ORTHO05D006930 3.3e-30 136.7 356 33.4
C08p05240 Brassica napus HOM05D005773 ORTHO05D006930 4.3e-30 136.3 358 35.8
CARHR037910 Cardamine hirsuta HOM05D005773 ORTHO05D006930 4.3e-30 136.3 362 34.0
Migut.H01460 Erythranthe guttata HOM05D005773 ORTHO05D006930 4.3e-30 136.3 264 38.3
Gorai.007G116800 Gossypium raimondii HOM05D005773 ORTHO05D006930 4.3e-30 136.3 380 33.4
BolC8t47338H Brassica oleracea HOM05D005773 ORTHO05D006930 5.6e-30 136.0 356 36.0
Peaxi162Scf00323g00817 Petunia axillaris HOM05D005773 ORTHO05D006930 7.3e-30 135.6 420 33.8
THA.LOC104802618 Tarenaya hassleriana HOM05D005773 ORTHO05D006930 7.3e-30 135.6 382 35.9
Nitab4.5_0012375g0020 Nicotiana tabacum HOM05D005773 ORTHO05D006930 9.5e-30 135.2 414 33.3
Ah.07g203560 Amaranthus hybridus HOM05D005773 ORTHO05D006930 1.2e-29 134.8 333 34.5
EL10Ac3g06235 Beta vulgaris HOM05D005773 ORTHO05D006930 1.2e-29 134.8 314 37.9
Haze_00756 Corylus avellana HOM05D005773 ORTHO05D006930 1.6e-29 134.4 346 32.1
Gohir.D11G109200 Gossypium hirsutum HOM05D005773 ORTHO05D006930 2.1e-29 134.0 380 32.9
Sp1g35250 Schrenkiella parvula HOM05D005773 ORTHO05D006930 2.1e-29 134.0 382 29.6
AL1G54900 Arabidopsis lyrata HOM05D005773 ORTHO05D006930 8.0e-29 132.1 348 34.2
AT1G48300 Arabidopsis thaliana HOM05D005773 ORTHO05D006930 8.0e-29 132.1 349 34.7
Duzib133G1161 Durio zibethinus HOM05D005773 ORTHO05D006930 8.0e-29 132.1 315 35.2
Sc25g0002150 Simmondsia chinensis HOM05D005773 ORTHO05D006930 8.0e-29 132.1 366 35.2
ECA246G2714 Erigeron canadensis HOM05D005773 ORTHO05D006930 1.0e-28 131.7 297 37.7
Solyc12g098850.2 Solanum lycopersicum HOM05D005773 ORTHO05D006930 1.0e-28 131.7 378 33.3
Thecc.01G324900 Theobroma cacao HOM05D005773 ORTHO05D006930 1.8e-28 131.0 397 29.5
AUR62002540 Chenopodium quinoa HOM05D005773 ORTHO05D006930 2.3e-28 130.6 337 36.2
PGSC0003DMG400004596 Solanum tuberosum HOM05D005773 ORTHO05D006930 3.1e-28 130.2 418 31.8
CANSAT78G1256 Cannabis sativa HOM05D005773 ORTHO05D006930 6.8e-28 129.0 367 34.1
Cpa.g.sc146.13 Carica papaya HOM05D005773 ORTHO05D006930 8.9e-28 128.6 315 33.0
Actinidia01071 Actinidia chinensis HOM05D005773 ORTHO05D006930 1.5e-27 127.9 299 38.1
PGR004G1534 Punica granatum HOM05D005773 ORTHO05D006930 2.6e-27 127.1 336 37.2
Gohir.A11G104400 Gossypium hirsutum HOM05D005773 ORTHO05D006930 3.4e-27 126.7 375 34.1
SGA_v2.0_scaffold109G31080 Striga asiatica HOM05D005773 ORTHO05D006930 3.4e-27 126.7 343 31.2
Sopen12g033600 Solanum pennellii HOM05D005773 ORTHO05D006930 4.4e-27 126.3 379 34.3
Thhalv10011577m.g Eutrema salsugineum HOM05D005773 ORTHO05D006930 5.8e-27 125.9 371 33.2
ATR0796G282 Amborella trichopoda HOM05D005773 ORTHO05D006930 1.7e-26 124.4 343 36.2
Aqoxy2G02494 Aquilegia oxysepala HOM05D005773 ORTHO05D006930 1.7e-26 124.4 363 33.6
Duzib138G1928 Durio zibethinus HOM05D005773 ORTHO05D006930 4.9e-26 122.9 368 29.9
Carub.0001s3743 Capsella rubella HOM05D005773 ORTHO05D006930 6.4e-26 122.5 365 32.9
TPR.G12556 Trifolium pratense HOM05D005773 ORTHO05D006930 1.1e-25 121.7 356 34.8
BcaC07g37153 Brassica carinata HOM05D005773 ORTHO05D006930 1.4e-25 121.3 342 35.7
Manes.01G234700 Manihot esculenta HOM05D005773 ORTHO05D006930 1.4e-25 121.3 311 35.0
Psat0s1206g0160 Pisum sativum HOM05D005773 ORTHO05D006930 1.9e-25 120.9 346 34.4
Nn3g21941 Nelumbo nucifera HOM05D005773 ORTHO05D006930 2.4e-25 120.6 393 34.4
Hma1.2p1_1449F.1_g284070 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 1.6e-24 117.9 322 36.0
Medtr4g124080 Medicago truncatula HOM05D005773 ORTHO05D006930 1.6e-24 117.9 348 35.6
Lj4g0014107 Lotus japonicus HOM05D005773 ORTHO05D006930 6.0e-24 115.9 359 33.4
Atru.chr5.865 Acer truncatum HOM05D005773 ORTHO05D006930 1.9e-22 110.9 218 33.5
Potri.002G187300 Populus trichocarpa HOM05D005773 ORTHO05D006930 5.6e-22 109.4 308 32.5
HPP92_012765 Vanilla planifolia HOM05D005773 ORTHO05D006930 7.3e-22 109.0 301 36.9
AUR62023652 Chenopodium quinoa HOM05D005773 ORTHO05D006930 8.1e-21 105.5 324 29.0
Phvul.003G123000 Phaseolus vulgaris HOM05D005773 ORTHO05D006930 8.1e-21 105.5 351 33.6
Eucgr.H04131 Eucalyptus grandis HOM05D005773 ORTHO05D006930 1.1e-20 105.1 310 37.1
Ca_21368_v3 Cicer arietinum L. HOM05D005773 ORTHO05D006930 1.4e-20 104.8 352 31.8
unitig_26.g9353 Utricularia gibba HOM05D005773 ORTHO05D006930 1.4e-20 104.8 395 27.6
Cfa015740 Carpinus fangiana HOM05D005773 ORTHO05D006930 4.0e-20 103.2 249 32.9
COL.COLO4_23133 Corchorus olitorius HOM05D005773 ORTHO05D006930 1.5e-19 101.3 395 29.1
VMungo1215G1523 Vigna mungo HOM05D005773 ORTHO05D006930 2.0e-19 100.9 346 34.7
arahy.Tifrunner.gnm1.ann1.9W2SDJ Arachis hypogaea HOM05D005773 ORTHO05D006930 1.3e-18 98.2 99 48.5
arahy.Tifrunner.gnm1.ann1.RWG9MN Arachis hypogaea HOM05D005773 ORTHO05D006930 1.3e-18 98.2 99 48.5
Zm00001eb417470 Zea mays HOM05D005773 ORTHO05D006930 1.3e-18 98.2 91 50.5
Os05g0137300 Oryza sativa ssp. japonica HOM05D005773 ORTHO05D006930 1.7e-18 97.8 95 48.4
Sed0002380 Sechium edule HOM05D005773 ORTHO05D006930 4.9e-18 96.3 342 32.7
arahy.Tifrunner.gnm1.ann1.YBC12K Arachis hypogaea HOM05D005773 ORTHO05D006930 8.3e-18 95.5 311 34.1
MELO3C006755.2 Cucumis melo HOM05D005773 ORTHO05D006930 8.3e-18 95.5 92 48.9
Glyma.13G118300 Glycine max HOM05D005773 ORTHO05D006930 8.3e-18 95.5 338 34.6
Ciclev10020833m.g Citrus clementina HOM05D005773 ORTHO05D006930 1.4e-17 94.7 296 33.8
arahy.Tifrunner.gnm1.ann1.F7JGYB Arachis hypogaea HOM05D005773 ORTHO05D006930 4.1e-17 93.2 100 46.0
ClCG05G006890 Citrullus lanatus HOM05D005773 ORTHO05D006930 1.6e-16 91.3 103 45.6
arahy.Tifrunner.gnm1.ann1.AWA2M3 Arachis hypogaea HOM05D000254 ORTHO05D000165 2.1e-16 90.9 100 44.0
Sed0009476 Sechium edule HOM05D005773 ORTHO05D006930 2.7e-16 90.5 95 45.3
CsaV3_3G015560 Cucumis sativus L. HOM05D005773 ORTHO05D006930 6.0e-16 89.4 103 43.7
Glyma.17G041600 Glycine max HOM05D005773 ORTHO05D006930 1.7e-15 87.8 339 33.0
Atru.chr4.3177 Acer truncatum HOM05D005773 ORTHO05D006930 2.3e-12 77.4 206 28.2
TAR625G0572 Trochodendron aralioides HOM05D005773 ORTHO05D006930 2.3e-12 77.4 87 46.0
arahy.Tifrunner.gnm1.ann1.EN1MLR Arachis hypogaea HOM05D005773 ORTHO05D006930 1.2e-11 75.1 56 58.9
SEGI_38196 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 4.4e-11 73.2 315 31.1
SEGI_24223 Sequoiadendron giganteum HOM05D005773 ORTHO05D006930 1.7e-10 71.2 311 30.9
Hma1.2p1_1067F.1_g253800 Hydrangea macrophylla HOM05D005773 ORTHO05D006930 3.8e-10 70.1 105 41.0
CARHR041400 Cardamine hirsuta HOM05D005773 ORTHO05D006930 3.5e-08 63.5 50 52.0
Pp3c17_20330 Physcomitrium patens HOM05D029403 ORTHO05D006930 3.5e-08 63.5 134 34.3
Cpa.g.sc57.12 Carica papaya HOM05D005773 ORTHO05D006930 1.3e-07 61.6 44 61.4
Atru.chr9.2474 Acer truncatum HOM05D000366 ORTHO05D001950 1.7e-07 61.2 92 34.8
Pp3c14_16980 Physcomitrium patens HOM05D029403 ORTHO05D006930 3.9e-07 60.1 91 36.3
Mapoly0035s0141 Marchantia polymorpha HOM05D005773 ORTHO05D006930 1.9e-06 57.8 80 42.5
SMO356G0556 Selaginella moellendorffii HOM05D005773 ORTHO05D006930 5.6e-06 56.2 57 40.4


User provided reference genes

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