Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0141 Ceratophyllum demersum HOM05D001304 ORTHO05D007800 4.1e-105 384.8 203 100.0
TAR629G3532 Trochodendron aralioides HOM05D001304 ORTHO05D007800 1.7e-63 246.5 226 56.6
Nn4g22445 Nelumbo nucifera HOM05D001304 ORTHO05D007800 1.2e-59 233.8 224 54.9
Aqoxy5G03558 Aquilegia oxysepala HOM05D001304 ORTHO05D007800 3.4e-59 232.3 227 55.1
Prupe.1G234500 Prunus persica HOM05D001304 ORTHO05D007800 2.9e-58 229.2 227 54.2
Ciclev10033657m.g Citrus clementina HOM05D001304 ORTHO05D007800 8.4e-58 227.6 226 54.0
CANSAT21G0986 Cannabis sativa HOM05D001304 ORTHO05D007800 1.4e-57 226.9 227 54.6
Atru.chr11.2222 Acer truncatum HOM05D001304 ORTHO05D007800 4.2e-57 225.3 226 53.1
Dinv11004 Davidia involucrata HOM05D001304 ORTHO05D007800 4.2e-57 225.3 228 55.3
Potri.010G054466 Populus trichocarpa HOM05D001304 ORTHO05D007800 1.6e-56 223.4 226 52.2
Sabra10G0050400 Salix brachista HOM05D001304 ORTHO05D007800 1.6e-56 223.4 226 52.2
MBI11_g16648_MAGBIO Magnolia biondii HOM05D001304 ORTHO05D007800 7.8e-56 221.1 227 52.4
Migut.K00684 Erythranthe guttata HOM05D001304 ORTHO05D007800 2.3e-55 219.5 227 51.5
Lj6C820G6 Lonicera japonica HOM05D001304 ORTHO05D007800 2.3e-55 219.5 226 52.7
Solyc09g014890.3 Solanum lycopersicum HOM05D001304 ORTHO05D007800 5.1e-55 218.4 227 52.9
Sopen09g007800 Solanum pennellii HOM05D001304 ORTHO05D007800 5.1e-55 218.4 227 52.4
Peaxi162Scf00160g00921 Petunia axillaris HOM05D001304 ORTHO05D007800 8.7e-55 217.6 228 51.3
MSTRG.532 Avicennia marina HOM05D001304 ORTHO05D007800 1.1e-54 217.2 228 51.3
Oeu041694.1 Olea europaea HOM05D001304 ORTHO05D007800 1.1e-54 217.2 225 51.1
COL.COLO4_23601 Corchorus olitorius HOM05D001304 ORTHO05D007800 1.9e-54 216.5 225 50.2
Gohir.A03G129900 Gossypium hirsutum HOM05D001304 ORTHO05D007800 1.9e-54 216.5 225 50.7
Gorai.005G172700 Gossypium raimondii HOM05D001304 ORTHO05D007800 1.9e-54 216.5 225 50.7
QL03p055365 Quercus lobata HOM05D001304 ORTHO05D007800 1.9e-54 216.5 225 52.4
TWI75G0249 Tripterygium wilfordii HOM05D001304 ORTHO05D007800 1.9e-54 216.5 227 51.1
CiPaw.06G063200 Carya illinoinensis HOM05D001304 ORTHO05D007800 2.5e-54 216.1 221 52.5
PSO063G3228 Papaver somniferum HOM05D001304 ORTHO05D007800 2.5e-54 216.1 231 52.4
PSO782G2509 Papaver somniferum HOM05D001304 ORTHO05D007800 2.5e-54 216.1 231 52.4
Gohir.D02G153600 Gossypium hirsutum HOM05D001304 ORTHO05D007800 1.3e-53 213.8 225 49.8
Eucgr.B03454 Eucalyptus grandis HOM05D001304 ORTHO05D007800 1.6e-53 213.4 225 49.8
Thecc.02G272500 Theobroma cacao HOM05D001304 ORTHO05D007800 1.6e-53 213.4 225 50.2
RcHm_v2.0_Chr4g0431491 Rosa chinensis HOM05D001304 ORTHO05D007800 6.2e-53 211.5 225 51.1
MD13G1110200 Malus domestica HOM05D001304 ORTHO05D007800 8.1e-53 211.1 230 51.3
Cfa009301 Carpinus fangiana HOM05D001304 ORTHO05D007800 1.4e-52 210.3 224 51.8
Glyma.18G010200 Glycine max HOM05D001304 ORTHO05D007800 3.1e-52 209.1 228 50.4
Lsat_1_v5_gn_8_151441 Lactuca sativa HOM05D001304 ORTHO05D007800 4.0e-52 208.8 228 53.1
arahy.Tifrunner.gnm1.ann1.D3J7CW Arachis hypogaea HOM05D001304 ORTHO05D007800 5.3e-52 208.4 226 51.8
arahy.Tifrunner.gnm1.ann1.J2BJ93 Arachis hypogaea HOM05D001304 ORTHO05D007800 5.3e-52 208.4 226 51.3
SalBow2G1645 Salvia bowleyana HOM05D001304 ORTHO05D007800 9.0e-52 207.6 225 48.4
CSS0031471 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 2.6e-51 206.1 229 50.2
Manes.12G016550 Manihot esculenta HOM05D001304 ORTHO05D007800 2.6e-51 206.1 223 48.9
VMungo1383G2972 Vigna mungo HOM05D001304 ORTHO05D007800 2.6e-51 206.1 228 49.6
ECA233G6138 Erigeron canadensis HOM05D001304 ORTHO05D007800 3.4e-51 205.7 219 51.6
Sed0013965 Sechium edule HOM05D001304 ORTHO05D007800 5.8e-51 204.9 224 49.6
Ca_16492_v3 Cicer arietinum L. HOM05D001304 ORTHO05D007800 7.6e-51 204.5 228 49.1
FAN07G2070 Fragaria x ananassa HOM05D001304 ORTHO05D007800 7.6e-51 204.5 225 48.9
SGA_v2.0_scaffold64G21891 Striga asiatica HOM05D001304 ORTHO05D007800 7.6e-51 204.5 223 48.4
Cc11_g16440 Coffea canephora HOM05D001304 ORTHO05D007800 9.9e-51 204.1 228 51.3
MELO3C010721.2 Cucumis melo HOM05D001304 ORTHO05D007800 1.7e-50 203.4 226 49.1
FvH4_4g24570 Fragaria vesca HOM05D001304 ORTHO05D007800 2.2e-50 203.0 225 48.4
FAN12G0304 Fragaria x ananassa HOM05D001304 ORTHO05D007800 2.2e-50 203.0 225 48.4
PGR102G3374 Punica granatum HOM05D001304 ORTHO05D007800 2.2e-50 203.0 227 48.0
HanXRQChr12g0372151 Helianthus annuus HOM05D001304 ORTHO05D007800 3.8e-50 202.2 228 51.3
Phvul.001G258500 Phaseolus vulgaris HOM05D001304 ORTHO05D007800 3.8e-50 202.2 228 48.2
Rhsim12G0036000 Rhododendron simsii HOM05D001304 ORTHO05D007800 3.8e-50 202.2 228 47.4
ClCG08G017380 Citrullus lanatus HOM05D001304 ORTHO05D007800 4.9e-50 201.8 226 49.1
FAN17G0228 Fragaria x ananassa HOM05D001304 ORTHO05D007800 4.9e-50 201.8 225 48.4
Lalb_Chr11g0075661 Lupinus albus HOM05D001304 ORTHO05D007800 6.4e-50 201.4 232 47.0
CsaV3_2G025240 Cucumis sativus L. HOM05D001304 ORTHO05D007800 1.1e-49 200.7 226 49.6
Lj6g0014976 Lotus japonicus HOM05D001304 ORTHO05D007800 1.9e-49 199.9 229 48.0
unitig_747.g21137 Utricularia gibba HOM05D001304 ORTHO05D007800 3.2e-49 199.1 219 48.4
Os01g0902200 Oryza sativa ssp. japonica HOM05D001304 ORTHO05D007800 3.9e-47 192.2 226 45.1
DCAR_026485 Daucus carota HOM05D001304 ORTHO05D007800 1.1e-46 190.7 231 46.8
GSVIVG01010319001 Vitis vinifera HOM05D001304 ORTHO05D007800 1.9e-46 189.9 229 45.9
Hund25432 Selenicereus undatus HOM05D001304 ORTHO05D007800 2.1e-45 186.4 224 44.6
ATR0824G247 Amborella trichopoda HOM05D001304 ORTHO05D007800 3.6e-45 185.7 226 46.0
Atru.BG.281.p Acer truncatum HOM05D001304 ORTHO05D007800 8.1e-45 184.5 174 54.6
Haze_12334 Corylus avellana HOM05D001304 ORTHO05D007800 1.4e-44 183.7 191 50.3
EL10Ac6g13421 Beta vulgaris HOM05D001304 ORTHO05D007800 3.1e-44 182.6 225 43.1
Ah.03g133760 Amaranthus hybridus HOM05D001304 ORTHO05D007800 2.0e-43 179.9 225 43.6
CSS0009053 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 2.6e-43 179.5 201 50.2
Carub.0002s1412 Capsella rubella HOM05D001304 ORTHO05D007800 1.4e-41 173.7 224 45.5
THA.LOC104825527 Tarenaya hassleriana HOM05D001304 ORTHO05D007800 1.4e-41 173.7 223 42.6
AL2G26390 Arabidopsis lyrata HOM05D001304 ORTHO05D007800 1.9e-41 173.3 224 45.5
Nitab4.5_0000139g0030 Nicotiana tabacum HOM05D001304 ORTHO05D007800 1.9e-41 173.3 198 53.0
C06p38530 Brassica napus HOM05D001304 ORTHO05D007800 4.2e-41 172.2 223 44.4
Sp5g22680 Schrenkiella parvula HOM05D001304 ORTHO05D007800 7.1e-41 171.4 223 44.4
CARHR060280 Cardamine hirsuta HOM05D001304 ORTHO05D007800 9.3e-41 171.0 224 43.8
AT1G67690 Arabidopsis thaliana HOM05D001304 ORTHO05D007800 2.1e-40 169.9 224 44.6
Aa31LG11G12080 Aethionema arabicum HOM05D001304 ORTHO05D007800 2.7e-40 169.5 221 43.9
BcaB03g15176 Brassica carinata HOM05D001304 ORTHO05D007800 2.7e-40 169.5 219 44.7
BolC6t39193H Brassica oleracea HOM05D001304 ORTHO05D007800 7.9e-40 167.9 219 44.7
BraA07t31049Z Brassica rapa HOM05D001304 ORTHO05D007800 1.8e-39 166.8 219 44.3
Thhalv10018203m.g Eutrema salsugineum HOM05D001304 ORTHO05D007800 3.9e-39 165.6 223 43.0
BcaC08g46186 Brassica carinata HOM05D001304 ORTHO05D007800 5.1e-39 165.2 219 44.3
CSS0003445 Camellia sinensis var. sinensis HOM05D001304 ORTHO05D007800 3.3e-38 162.5 224 43.8
A07p32460 Brassica napus HOM05D001304 ORTHO05D007800 4.8e-37 158.7 224 42.4
BraA07t30870Z Brassica rapa HOM05D001304 ORTHO05D007800 8.1e-37 157.9 258 38.4
BolC6t38946H Brassica oleracea HOM05D001304 ORTHO05D007800 1.1e-36 157.5 261 37.9
A07p34200 Brassica napus HOM05D001304 ORTHO05D007800 2.4e-36 156.4 247 39.7
AUR62024175 Chenopodium quinoa HOM05D001304 ORTHO05D007800 4.0e-36 155.6 224 37.9
TPR.G33396 Trifolium pratense HOM05D001304 ORTHO05D007800 4.0e-36 155.6 138 58.0
C06p42370 Brassica napus HOM05D001304 ORTHO05D007800 2.0e-35 153.3 246 39.4
Psat5g093160 Pisum sativum HOM05D001304 ORTHO05D007800 4.5e-35 152.1 138 58.0
BcaB03g15369 Brassica carinata HOM05D001304 ORTHO05D007800 7.6e-35 151.4 223 41.7
Medtr3g086000 Medicago truncatula HOM05D001304 ORTHO05D007800 4.9e-34 148.7 138 57.2
AUR62005559 Chenopodium quinoa HOM05D001304 ORTHO05D007800 1.4e-33 147.1 278 32.4
vmacro01092 Vaccinium macrocarpon HOM05D001304 ORTHO05D007800 3.5e-32 142.5 138 54.3
Actinidia30684 Actinidia chinensis HOM05D001304 ORTHO05D007800 3.9e-31 139.0 145 50.3
Pp3c19_17580 Physcomitrium patens HOM05D001304 ORTHO05D007800 3.9e-31 139.0 219 37.4
Mapoly0080s0066 Marchantia polymorpha HOM05D001304 ORTHO05D007800 8.7e-31 137.9 224 39.3
AagrBONN_evm.TU.Sc2ySwM_368.2332 Anthoceros agrestis HOM05D002380 ORTHO05D008286 7.4e-30 134.8 221 36.7
MD16G1110100 Malus domestica HOM05D001304 ORTHO05D007800 1.6e-29 133.7 108 63.9
Sc11g0000750 Simmondsia chinensis HOM05D001304 ORTHO05D007800 6.7e-23 111.7 138 42.8
Pp3c18_20030 Physcomitrium patens HOM05D001304 ORTHO05D007800 2.2e-21 106.7 157 41.4
CAN.G1220.1 Capsicum annuum HOM05D001304 ORTHO05D007800 1.1e-14 84.3 60 61.7
Glyma.11G247133 Glycine max HOM05D001304 ORTHO05D007800 3.3e-14 82.8 60 60.0
Cpa.g.sc86.3 Carica papaya HOM05D001304 ORTHO05D007800 2.8e-13 79.7 105 40.0
HPP92_008946 Vanilla planifolia HOM05D001304 ORTHO05D007800 1.1e-12 77.8 81 51.9
vmacro01093 Vaccinium macrocarpon HOM05D001304 ORTHO05D007800 6.9e-12 75.1 60 55.0
FAN22G1988 Fragaria x ananassa HOM05D001304 ORTHO05D007800 2.0e-11 73.6 131 37.4
Zm00001eb144370 Zea mays HOM05D001304 ORTHO05D007800 3.8e-10 69.3 62 48.4
MD02G1151800 Malus domestica HOM05D001304 ORTHO05D007800 2.5e-09 66.6 60 50.0
SMO364G0683 Selaginella moellendorffii HOM05D001304 ORTHO05D007800 4.2e-09 65.9 125 31.2
MD16G1110200 Malus domestica HOM05D001304 ORTHO05D007800 1.5e-06 57.4 42 54.8


User provided reference genes

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