Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE09G0017 Ceratophyllum demersum HOM05D004052 ORTHO05D004694 1.2e-73 280.0 173 100.0
CDE02G2317 Ceratophyllum demersum HOM05D004052 ORTHO05D004694 6.5e-59 231.1 212 64.6
MBI10_g30421_MAGBIO Magnolia biondii HOM05D004052 ORTHO05D004694 7.7e-12 74.7 208 32.7
Ca_03392_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 1.7e-11 73.6 202 32.2
Ca_29679_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 1.7e-11 73.6 202 32.2
Oeu001302.1 Olea europaea HOM05D004052 ORTHO05D004694 2.2e-11 73.2 198 31.8
GSVIVG01038086001 Vitis vinifera HOM05D004052 ORTHO05D004694 5.0e-11 72.0 196 32.1
RcHm_v2.0_Chr5g0027741 Rosa chinensis HOM05D004052 ORTHO05D004694 1.1e-10 70.9 199 33.7
Atru.chr2.1894 Acer truncatum HOM05D004052 ORTHO05D004694 2.5e-10 69.7 192 31.2
FvH4_3g16600 Fragaria vesca HOM05D004052 ORTHO05D004694 3.2e-10 69.3 199 33.2
FAN11G2946 Fragaria x ananassa HOM05D004052 ORTHO05D004694 3.2e-10 69.3 199 33.2
Gohir.D01G029700 Gossypium hirsutum HOM05D004052 ORTHO05D004694 3.2e-10 69.3 192 32.8
Gorai.002G038800 Gossypium raimondii HOM05D004052 ORTHO05D004694 3.2e-10 69.3 192 32.8
FAN16G0069 Fragaria x ananassa HOM05D004052 ORTHO05D004694 4.2e-10 68.9 196 36.2
PGR031G1077 Punica granatum HOM05D004052 ORTHO05D004694 4.2e-10 68.9 68 54.4
TPR.G26614 Trifolium pratense HOM05D004052 ORTHO05D004694 5.5e-10 68.6 72 58.3
FAN21G2550 Fragaria x ananassa HOM05D004052 ORTHO05D004694 9.4e-10 67.8 199 32.7
Cpa.g.sc77.96 Carica papaya HOM05D004052 ORTHO05D004694 2.7e-09 66.2 187 31.0
Lalb_Chr25g0285401 Lupinus albus HOM05D004052 ORTHO05D004694 6.1e-09 65.1 65 58.5
Psat1g001080 Pisum sativum HOM05D004052 ORTHO05D004694 8.0e-09 64.7 67 58.2
arahy.Tifrunner.gnm1.ann1.15VG0N Arachis hypogaea HOM05D004052 ORTHO05D004694 1.0e-08 64.3 70 55.7
arahy.Tifrunner.gnm1.ann1.SLVF1G Arachis hypogaea HOM05D004052 ORTHO05D004694 1.0e-08 64.3 70 55.7
Medtr8g008740 Medicago truncatula HOM05D000280 ORTHO05D000632 1.0e-08 64.3 67 56.7
PSO541G0468 Papaver somniferum HOM05D004052 ORTHO05D004694 1.0e-08 64.3 188 31.9
Prupe.4G148800 Prunus persica HOM05D004052 ORTHO05D004694 1.0e-08 64.3 200 29.5
Glyma.15G248900 Glycine max HOM05D004052 ORTHO05D004694 2.3e-08 63.2 201 31.3
Solyc07g056650.4 Solanum lycopersicum HOM05D004052 ORTHO05D004694 3.0e-08 62.8 70 50.0
Sopen07g029990 Solanum pennellii HOM05D004052 ORTHO05D004694 3.0e-08 62.8 70 50.0
VMungo1080G1119 Vigna mungo HOM05D004052 ORTHO05D004694 3.0e-08 62.8 65 56.9
CAN.G1003.5 Capsicum annuum HOM05D004052 ORTHO05D004694 4.0e-08 62.4 70 52.9
QL04p070259 Quercus lobata HOM05D004052 ORTHO05D004694 4.0e-08 62.4 191 32.5
TPR.G22987 Trifolium pratense HOM05D004052 ORTHO05D004694 4.0e-08 62.4 67 55.2
HanXRQChr12g0373561 Helianthus annuus HOM05D004052 ORTHO05D004694 5.2e-08 62.0 200 31.0
Nitab4.5_0002495g0040 Nicotiana tabacum HOM05D004052 ORTHO05D004694 5.2e-08 62.0 70 50.0
Manes.03G091016 Manihot esculenta HOM05D004052 ORTHO05D004694 6.8e-08 61.6 204 30.4
Nn4g26569 Nelumbo nucifera HOM05D004052 ORTHO05D004694 6.8e-08 61.6 189 35.4
Potri.001G377900 Populus trichocarpa HOM05D004052 ORTHO05D004694 8.8e-08 61.2 199 29.6
Nn3g20784 Nelumbo nucifera HOM05D004052 ORTHO05D004694 1.5e-07 60.5 219 31.5
Sabra16G0248900 Salix brachista HOM05D004052 ORTHO05D004694 1.5e-07 60.5 199 29.6
Actinidia12841 Actinidia chinensis HOM05D004052 ORTHO05D004694 2.0e-07 60.1 70 50.0
Thecc.07G146300 Theobroma cacao HOM05D004052 ORTHO05D004694 2.0e-07 60.1 70 51.4
Lj1A816T35 Lonicera japonica HOM05D004052 ORTHO05D004694 2.6e-07 59.7 69 46.4
Actinidia35175 Actinidia chinensis HOM05D004052 ORTHO05D004694 3.4e-07 59.3 70 48.6
Glyma.13G259200 Glycine max HOM05D004052 ORTHO05D004694 3.4e-07 59.3 65 55.4
Oeu020015.2 Olea europaea HOM05D004052 ORTHO05D004694 3.4e-07 59.3 195 32.3
Rhsim06G0184900 Rhododendron simsii HOM05D004052 ORTHO05D004694 3.4e-07 59.3 70 47.1
MSTRG.12848 Avicennia marina HOM05D004052 ORTHO05D004694 4.4e-07 58.9 146 34.9
Eucgr.L01015 Eucalyptus grandis HOM05D004052 ORTHO05D004694 4.4e-07 58.9 146 38.4
Gohir.A01G041900 Gossypium hirsutum HOM05D004052 ORTHO05D004694 4.4e-07 58.9 208 31.2
Lsat_1_v5_gn_5_125041 Lactuca sativa HOM05D004052 ORTHO05D004694 4.4e-07 58.9 65 53.8
COL.COLO4_17418 Corchorus olitorius HOM05D004052 ORTHO05D004694 5.7e-07 58.5 68 50.0
Nitab4.5_0000505g0150 Nicotiana tabacum HOM05D004052 ORTHO05D004694 5.7e-07 58.5 71 47.9
Aqoxy7G03971 Aquilegia oxysepala HOM05D004052 ORTHO05D004694 7.5e-07 58.2 219 32.4
Ca_01645_v3 Cicer arietinum L. HOM05D004052 ORTHO05D004694 7.5e-07 58.2 196 31.1
Ciclev10020573m.g Citrus clementina HOM05D004052 ORTHO05D004694 7.5e-07 58.2 196 29.6
Medtr2g070730 Medicago truncatula HOM05D004052 ORTHO05D004694 7.5e-07 58.2 198 30.8
PSO675G8138 Papaver somniferum HOM05D004052 ORTHO05D004694 7.5e-07 58.2 188 31.4
MSTRG.6718 Avicennia marina HOM05D004052 ORTHO05D004694 9.8e-07 57.8 67 50.7
PGSC0003DMG400027647 Solanum tuberosum HOM05D004052 ORTHO05D004694 9.8e-07 57.8 190 30.0
Eucgr.F03205 Eucalyptus grandis HOM05D004052 ORTHO05D004694 1.3e-06 57.4 70 51.4
Manes.15G101600 Manihot esculenta HOM05D004052 ORTHO05D004694 1.3e-06 57.4 195 30.8
Nitab4.5_0000639g0180 Nicotiana tabacum HOM05D004052 ORTHO05D004694 1.3e-06 57.4 191 31.4
Eucgr.L01921 Eucalyptus grandis HOM05D004052 ORTHO05D004694 1.7e-06 57.0 146 37.7
Phvul.005G060700 Phaseolus vulgaris HOM05D004052 ORTHO05D004694 1.7e-06 57.0 199 30.7
DCAR_019621 Daucus carota HOM05D004052 ORTHO05D004694 2.2e-06 56.6 197 28.9
vmacro09432 Vaccinium macrocarpon HOM05D004052 ORTHO05D004694 2.2e-06 56.6 71 49.3
Cc05_g10320 Coffea canephora HOM05D004052 ORTHO05D004694 2.8e-06 56.2 70 47.1
MD05G1208600 Malus domestica HOM05D004052 ORTHO05D004694 2.8e-06 56.2 180 30.0
TAR629G3304 Trochodendron aralioides HOM05D004052 ORTHO05D004694 2.8e-06 56.2 212 30.7
Migut.M00589 Erythranthe guttata HOM05D004052 ORTHO05D004694 3.7e-06 55.8 200 28.5
Eucgr.E02731 Eucalyptus grandis HOM05D004052 ORTHO05D004694 3.7e-06 55.8 146 37.0
Ah.04g163830 Amaranthus hybridus HOM05D004052 ORTHO05D004694 4.9e-06 55.5 189 28.6
Nitab4.5_0001662g0050 Nicotiana tabacum HOM05D004052 ORTHO05D004694 4.9e-06 55.5 196 29.1
CANSAT94G0014 Cannabis sativa HOM05D004052 ORTHO05D004694 6.3e-06 55.1 192 30.7
RhsimUnG0204400 Rhododendron simsii HOM05D004052 ORTHO05D004694 6.3e-06 55.1 73 45.2
Carub.0002s2533 Capsella rubella HOM05D004052 ORTHO05D004694 8.3e-06 54.7 67 50.7
ECA234G3832 Erigeron canadensis HOM05D004052 ORTHO05D004694 8.3e-06 54.7 179 33.0


User provided reference genes

Program Settings