Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 2.5e-160 568.9 316 100.0
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 4.7e-106 388.7 341 71.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 1.7e-55 220.7 252 50.4
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 5.4e-54 215.7 381 45.4
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 1.6e-53 214.2 366 45.1
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 3.5e-53 213.0 261 44.8
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.3e-52 211.1 261 44.4
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 5.1e-52 209.1 383 43.1
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 3.3e-51 206.5 312 49.7
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 5.6e-51 205.7 359 45.7
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 8.1e-50 201.8 391 44.8
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 4.0e-49 199.5 310 49.4
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 4.0e-49 199.5 343 46.1
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 5.2e-49 199.1 280 44.3
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 8.9e-49 198.4 262 47.3
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 3.4e-48 196.4 365 44.9
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 3.4e-48 196.4 281 44.1
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 4.4e-48 196.1 314 47.1
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 4.4e-48 196.1 246 48.0
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 4.4e-48 196.1 237 48.9
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 5.8e-48 195.7 248 48.0
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 5.8e-48 195.7 248 47.2
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 7.6e-48 195.3 245 45.7
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.6e-48 195.3 247 47.4
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 9.9e-48 194.9 324 45.1
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 9.9e-48 194.9 344 43.6
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.3e-47 194.5 231 47.6
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 1.7e-47 194.1 357 42.0
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 1.7e-47 194.1 244 45.1
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 1.7e-47 194.1 197 52.8
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 2.2e-47 193.7 252 46.4
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 2.2e-47 193.7 265 46.8
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.9e-47 193.4 242 46.3
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 3.8e-47 193.0 237 46.0
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 4.9e-47 192.6 372 42.7
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 4.9e-47 192.6 363 43.3
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 4.9e-47 192.6 347 45.0
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 4.9e-47 192.6 240 48.8
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 4.9e-47 192.6 243 46.1
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 4.9e-47 192.6 241 47.3
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 6.4e-47 192.2 231 48.5
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 6.4e-47 192.2 184 53.8
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 6.4e-47 192.2 377 43.5
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 8.4e-47 191.8 244 43.9
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 8.4e-47 191.8 307 46.6
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 8.4e-47 191.8 322 45.3
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 1.9e-46 190.7 219 47.5
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 2.4e-46 190.3 238 46.2
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 7.1e-46 188.7 245 44.5
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 7.1e-46 188.7 280 41.8
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 7.1e-46 188.7 306 36.9
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 1.2e-45 188.0 236 45.3
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 1.6e-45 187.6 332 45.8
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.6e-45 187.6 236 44.9
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 2.1e-45 187.2 265 41.9
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 2.1e-45 187.2 245 47.8
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 3.5e-45 186.4 187 52.9
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 4.6e-45 186.0 361 41.3
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 6.0e-45 185.7 245 44.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 1.0e-44 184.9 243 44.0
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 1.3e-44 184.5 239 46.4
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 1.3e-44 184.5 246 45.5
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 2.3e-44 183.7 247 44.1
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 3.0e-44 183.3 277 43.7
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 3.0e-44 183.3 242 45.9
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 3.9e-44 183.0 247 44.9
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 5.1e-44 182.6 239 44.8
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 6.6e-44 182.2 230 44.3
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 8.7e-44 181.8 241 45.6
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 8.7e-44 181.8 179 52.5
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 1.5e-43 181.0 253 44.3
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 1.5e-43 181.0 281 41.6
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.5e-43 181.0 332 44.0
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 1.9e-43 180.6 249 42.6
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 2.5e-43 180.3 250 44.8
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 3.3e-43 179.9 322 43.8
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 4.3e-43 179.5 227 46.7
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 4.3e-43 179.5 231 46.8
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 5.6e-43 179.1 198 49.5
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 7.3e-43 178.7 178 52.8
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 1.3e-42 177.9 258 43.4
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.3e-42 177.9 220 45.5
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 1.6e-42 177.6 220 45.9
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.1e-42 177.2 355 43.7
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 4.8e-42 176.0 198 49.5
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 6.2e-42 175.6 196 49.5
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.1e-41 174.9 241 45.2
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 3.1e-41 173.3 250 42.4
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 4.0e-41 172.9 180 52.2
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 2.6e-40 170.2 249 42.2
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 2.6e-40 170.2 346 43.1
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 5.8e-40 169.1 250 41.6
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 7.6e-40 168.7 185 50.3
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 9.9e-40 168.3 323 44.0
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.9e-39 166.8 316 43.0
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 1.4e-38 164.5 198 45.5
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 1.0e-36 158.3 166 50.6
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.3e-36 157.9 244 44.3
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.3e-36 157.1 270 37.8
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 6.7e-36 155.6 297 43.8
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 8.7e-36 155.2 171 48.0
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 4.3e-35 152.9 177 46.3
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 9.6e-35 151.8 165 47.9
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 8.1e-34 148.7 378 36.5
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 2.4e-33 147.1 199 42.7
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 4.0e-33 146.4 172 49.4
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 4.5e-32 142.9 204 39.2
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 7.1e-30 135.6 213 39.9
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 1.8e-28 131.0 353 38.0
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 2.3e-28 130.6 200 40.0
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 6.0e-21 105.9 145 47.6
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 1.0e-12 78.6 119 40.3
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 2.3e-12 77.4 49 71.4
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 8.2e-10 68.9 57 61.4
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 2.2e-07 60.8 215 27.0
Cre19.g750397 Chlamydomonas reinhardtii HOM05D002428 ORTHO05D008664 2.2e-07 60.8 125 35.2
PRCOL_00004793 Prasinoderma coloniale HOM05D002428 ORTHO05D008664 4.2e-06 56.6 120 30.8


User provided reference genes

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