Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 3.1e-130 468.4 220 100.0
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 1.1e-47 194.1 248 43.1
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 8.0e-46 188.0 246 42.3
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 3.7e-43 179.1 237 42.6
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 4.8e-43 178.7 253 41.5
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 1.8e-42 176.8 233 42.9
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 2.0e-41 173.3 242 40.9
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 2.0e-41 173.3 253 41.1
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 1.0e-40 171.0 246 39.8
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 1.3e-40 170.6 216 43.1
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 2.9e-40 169.5 254 40.6
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 5.0e-40 168.7 246 38.6
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 6.5e-40 168.3 259 37.8
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 6.5e-40 168.3 253 39.9
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 4.2e-39 165.6 246 39.4
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 7.2e-39 164.9 239 38.5
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 7.2e-39 164.9 228 41.7
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 9.4e-39 164.5 250 38.0
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 3.6e-38 162.5 259 36.3
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 4.7e-38 162.2 248 37.5
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 1.0e-37 161.0 241 39.8
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 1.0e-37 161.0 236 39.8
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 1.0e-37 161.0 237 38.0
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 1.0e-37 161.0 247 38.9
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.8e-37 160.2 246 39.8
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 2.3e-37 159.8 251 36.7
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 4.0e-37 159.1 241 39.0
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 5.2e-37 158.7 237 38.4
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.2e-36 157.5 250 36.0
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 1.2e-36 157.5 253 37.9
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 1.2e-36 157.5 238 37.4
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.5e-36 157.1 237 37.6
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 1.5e-36 157.1 236 37.7
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 1.5e-36 157.1 256 37.5
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 2.0e-36 156.8 249 38.6
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 2.6e-36 156.4 247 38.1
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 3.4e-36 156.0 258 36.8
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 3.4e-36 156.0 262 36.6
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 4.4e-36 155.6 237 38.4
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 4.4e-36 155.6 247 36.4
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 5.7e-36 155.2 239 38.1
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 7.5e-36 154.8 238 36.6
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 9.8e-36 154.5 237 39.7
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 9.8e-36 154.5 254 35.8
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 1.3e-35 154.1 237 38.0
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 1.3e-35 154.1 248 37.9
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 2.8e-35 152.9 251 36.7
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 3.7e-35 152.5 237 38.4
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.7e-35 152.5 236 38.1
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 6.3e-35 151.8 233 37.8
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 8.3e-35 151.4 252 38.1
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 8.3e-35 151.4 240 37.1
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 1.8e-34 150.2 238 37.0
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 3.1e-34 149.4 255 37.3
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 7.0e-34 148.3 245 38.8
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 9.1e-34 147.9 237 37.6
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.2e-33 147.5 259 34.7
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.6e-33 147.1 246 37.0
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 2.7e-33 146.4 247 36.0
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 3.5e-33 146.0 248 35.9
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 3.5e-33 146.0 248 35.9
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 5.9e-33 145.2 247 36.8
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 1.3e-32 144.1 222 37.4
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.7e-32 143.7 259 34.4
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.2e-32 143.3 246 35.8
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 2.9e-32 142.9 253 35.6
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 2.9e-32 142.9 236 35.2
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 8.5e-32 141.4 252 36.1
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 1.9e-31 140.2 249 34.9
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 2.5e-31 139.8 248 35.1
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 2.5e-31 139.8 248 35.1
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 4.2e-31 139.0 239 36.0
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 4.2e-31 139.0 246 35.8
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 5.5e-31 138.7 237 35.9
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 2.1e-30 136.7 237 36.3
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 8.0e-30 134.8 246 36.2
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 4.0e-29 132.5 245 34.3
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 1.5e-28 130.6 240 35.4
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.0e-28 130.2 241 36.1
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 9.8e-28 127.9 243 33.7
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 9.8e-28 127.9 238 32.4
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 8.3e-27 124.8 240 32.5
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.1e-26 122.5 221 36.2
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.2e-25 120.9 236 33.5
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 2.7e-25 119.8 238 33.2
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.7e-25 119.8 236 33.5
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 2.7e-25 119.8 267 28.5
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 5.0e-24 115.5 236 33.1
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 6.6e-24 115.2 163 40.5
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 1.2e-22 110.9 94 55.3
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 8.0e-22 108.2 236 31.4
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.2e-20 104.4 232 34.9
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 2.0e-20 103.6 127 43.3
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 2.6e-20 103.2 158 38.0
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 3.4e-20 102.8 89 58.4
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 4.4e-20 102.4 237 28.3
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.1e-18 97.8 169 32.5
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 1.1e-18 97.8 183 34.4
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 1.8e-18 97.1 304 24.7
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 4.1e-18 95.9 304 24.0
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.7e-17 93.2 73 60.3
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 5.9e-17 92.0 236 26.3
Aqoxy5G00644 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 6.6e-16 88.6 93 46.2
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 8.6e-16 88.2 241 28.6
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 8.6e-16 88.2 89 43.8
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 2.5e-15 86.7 79 54.4
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 8.0e-14 81.6 77 55.8
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 3.1e-13 79.7 66 57.6
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 4.0e-13 79.3 78 55.1
PSO210G2970 Papaver somniferum HOM05D006775 ORTHO05D008344 6.8e-13 78.6 105 38.1
Duzib212G0132 Durio zibethinus HOM05D006775 ORTHO05D008344 3.4e-12 76.3 106 41.5
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 4.4e-12 75.9 82 46.3
Haze_01266 Corylus avellana HOM05D006775 ORTHO05D008344 2.2e-11 73.6 68 47.1
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 6.4e-11 72.0 352 20.5
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 1.2e-09 67.8 136 34.6
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 4.6e-09 65.9 59 52.5


User provided reference genes

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