Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1664 Ceratophyllum demersum HOM05D005286 ORTHO05D006348 1.2e-86 323.2 162 100.0
TAR625G0087 Trochodendron aralioides HOM05D005286 ORTHO05D006348 1.8e-58 229.6 163 70.6
MBI06_g35210_MAGBIO Magnolia biondii HOM05D005286 ORTHO05D006348 1.1e-57 226.9 163 69.3
PSO170G0528 Papaver somniferum HOM05D005286 ORTHO05D006348 8.2e-56 220.7 153 68.6
GSVIVG01022340001 Vitis vinifera HOM05D005286 ORTHO05D006348 1.4e-55 219.9 163 66.3
Atru.chr4.988 Acer truncatum HOM05D005286 ORTHO05D006348 1.8e-55 219.5 166 65.1
MD15G1135000 Malus domestica HOM05D005286 ORTHO05D006348 4.1e-55 218.4 162 65.4
ATR0138G018 Amborella trichopoda HOM05D005286 ORTHO05D006348 6.9e-55 217.6 140 72.9
VMungo1309G1016 Vigna mungo HOM05D005286 ORTHO05D006348 9.0e-55 217.2 162 63.6
Phvul.009G154600 Phaseolus vulgaris HOM05D005286 ORTHO05D006348 1.5e-54 216.5 162 64.2
TWI75G1712 Tripterygium wilfordii HOM05D005286 ORTHO05D006348 2.0e-54 216.1 162 63.6
Aqoxy5G02419 Aquilegia oxysepala HOM05D005286 ORTHO05D006348 3.4e-54 215.3 163 65.0
Hma1.2p1_3117F.1_g332810 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 5.9e-54 214.5 162 63.0
Ciclev10000962m.g Citrus clementina HOM05D005286 ORTHO05D006348 7.6e-54 214.2 163 63.2
Lj1g0003788 Lotus japonicus HOM05D003519 ORTHO05D004443 1.0e-53 213.8 162 63.6
Solyc12g088020.1 Solanum lycopersicum HOM05D005286 ORTHO05D006348 2.9e-53 212.2 163 62.0
SGA_v2.0_scaffold189G40378 Striga asiatica HOM05D005286 ORTHO05D006348 3.8e-53 211.8 164 66.5
Gohir.A12G085400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 6.5e-53 211.1 163 63.2
Prupe.4G274700 Prunus persica HOM05D005286 ORTHO05D006348 6.5e-53 211.1 162 63.6
CANSAT35G0194 Cannabis sativa HOM05D005286 ORTHO05D006348 8.4e-53 210.7 162 61.1
Sopen12g030050 Solanum pennellii HOM05D005286 ORTHO05D006348 8.4e-53 210.7 163 61.3
Lj4A421T8 Lonicera japonica HOM05D005286 ORTHO05D006348 1.4e-52 209.9 154 64.9
Oeu037874.1 Olea europaea HOM05D005286 ORTHO05D006348 1.4e-52 209.9 163 64.4
PGR119G0364 Punica granatum HOM05D005286 ORTHO05D006348 1.4e-52 209.9 163 63.2
Sed0025698 Sechium edule HOM05D005286 ORTHO05D006348 1.4e-52 209.9 171 60.8
CAN.G1104.7 Capsicum annuum HOM05D005286 ORTHO05D006348 1.9e-52 209.5 163 60.1
ClCG04G002290 Citrullus lanatus HOM05D005286 ORTHO05D006348 1.9e-52 209.5 164 63.4
CiPaw.03G118000 Carya illinoinensis HOM05D005286 ORTHO05D006348 2.5e-52 209.1 160 64.4
Glyma.06G155750 Glycine max HOM05D005286 ORTHO05D006348 2.5e-52 209.1 162 62.3
Manes.12G159000 Manihot esculenta HOM05D005286 ORTHO05D006348 2.5e-52 209.1 163 64.4
Hma1.2p1_0310F.1_g121020 Hydrangea macrophylla HOM05D005286 ORTHO05D006348 3.2e-52 208.8 142 67.6
Thecc.01G137300 Theobroma cacao HOM05D005286 ORTHO05D006348 3.2e-52 208.8 163 63.8
Gorai.008G094500 Gossypium raimondii HOM05D005286 ORTHO05D006348 4.2e-52 208.4 163 63.2
Gohir.D12G083400 Gossypium hirsutum HOM05D005286 ORTHO05D006348 5.5e-52 208.0 163 63.2
Nn5g28436 Nelumbo nucifera HOM05D005286 ORTHO05D006348 5.5e-52 208.0 168 62.5
Ah.06g191030 Amaranthus hybridus HOM05D005286 ORTHO05D006348 7.2e-52 207.6 155 61.3
MSTRG.23499 Avicennia marina HOM05D005286 ORTHO05D006348 7.2e-52 207.6 163 63.8
MELO3C008897.2 Cucumis melo HOM05D005286 ORTHO05D006348 7.2e-52 207.6 164 62.8
Hund21799 Selenicereus undatus HOM05D005286 ORTHO05D006348 7.2e-52 207.6 169 58.6
Actinidia16523 Actinidia chinensis HOM05D005286 ORTHO05D006348 9.3e-52 207.2 163 62.0
arahy.Tifrunner.gnm1.ann1.7K8RK5 Arachis hypogaea HOM05D005286 ORTHO05D006348 9.3e-52 207.2 163 62.0
arahy.Tifrunner.gnm1.ann1.ZN9YLD Arachis hypogaea HOM05D005286 ORTHO05D006348 9.3e-52 207.2 163 61.3
FAN26G1990 Fragaria x ananassa HOM05D005286 ORTHO05D006348 9.3e-52 207.2 162 61.1
Rhsim08G0000400 Rhododendron simsii HOM05D005286 ORTHO05D006348 9.3e-52 207.2 163 64.4
EL10Ac4g09623 Beta vulgaris HOM05D005286 ORTHO05D006348 1.2e-51 206.8 163 62.6
AUR62006858 Chenopodium quinoa HOM05D005286 ORTHO05D006348 1.2e-51 206.8 157 63.1
ECA248G0233 Erigeron canadensis HOM05D005286 ORTHO05D006348 1.2e-51 206.8 163 62.0
HanXRQChr01g0017141 Helianthus annuus HOM05D005286 ORTHO05D006348 1.6e-51 206.5 163 62.0
RcHm_v2.0_Chr2g0122521 Rosa chinensis HOM05D005286 ORTHO05D006348 1.6e-51 206.5 162 61.7
Ca_16981_v3 Cicer arietinum L. HOM05D005286 ORTHO05D006348 2.1e-51 206.1 162 61.1
FvH4_1g24860 Fragaria vesca HOM05D005286 ORTHO05D006348 2.1e-51 206.1 162 61.1
FAN19G2916 Fragaria x ananassa HOM05D005286 ORTHO05D006348 2.1e-51 206.1 162 61.1
Lalb_Chr23g0272691 Lupinus albus HOM05D005286 ORTHO05D006348 3.5e-51 205.3 149 66.4
AUR62000514 Chenopodium quinoa HOM05D005286 ORTHO05D006348 4.6e-51 204.9 157 62.4
Duzib187G0999 Durio zibethinus HOM05D005286 ORTHO05D006348 4.6e-51 204.9 164 61.0
FAN23G2334 Fragaria x ananassa HOM05D005286 ORTHO05D006348 4.6e-51 204.9 162 61.1
CSS0004303 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 6.1e-51 204.5 163 62.6
Lsat_1_v5_gn_1_78000 Lactuca sativa HOM05D005286 ORTHO05D006348 6.1e-51 204.5 163 60.1
CSS0034769 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 7.9e-51 204.1 163 62.6
Sc09g0002230 Simmondsia chinensis HOM05D005286 ORTHO05D006348 1.0e-50 203.8 164 57.9
PGSC0003DMG400045338 Solanum tuberosum HOM05D005286 ORTHO05D006348 1.0e-50 203.8 163 60.1
Cfa021278 Carpinus fangiana HOM05D005286 ORTHO05D006348 2.3e-50 202.6 162 61.1
CsaV3_4G030380 Cucumis sativus L. HOM05D005286 ORTHO05D006348 2.3e-50 202.6 164 59.8
Migut.H00797 Erythranthe guttata HOM05D005286 ORTHO05D006348 2.3e-50 202.6 163 62.6
FAN28G1250 Fragaria x ananassa HOM05D005286 ORTHO05D006348 3.0e-50 202.2 162 59.9
Peaxi162Scf00151g00811 Petunia axillaris HOM05D005286 ORTHO05D006348 3.0e-50 202.2 163 60.7
HPP92_011629 Vanilla planifolia HOM05D005286 ORTHO05D006348 3.0e-50 202.2 162 60.5
QL10p041275 Quercus lobata HOM05D005286 ORTHO05D006348 3.9e-50 201.8 161 60.2
vmacro18685 Vaccinium macrocarpon HOM05D005286 ORTHO05D006348 3.9e-50 201.8 163 63.8
Medtr3g096675 Medicago truncatula HOM05D005286 ORTHO05D006348 6.7e-50 201.1 162 59.9
Potri.007G101600 Populus trichocarpa HOM05D005286 ORTHO05D006348 8.7e-50 200.7 164 60.4
Zm00001eb434510 Zea mays HOM05D005286 ORTHO05D006348 1.1e-49 200.3 168 61.9
Sabra07G0083800 Salix brachista HOM05D005286 ORTHO05D006348 1.9e-49 199.5 164 59.8
Nn1g08960 Nelumbo nucifera HOM05D005286 ORTHO05D006348 3.3e-49 198.7 141 64.5
TPR.G33580 Trifolium pratense HOM05D005286 ORTHO05D006348 3.3e-49 198.7 136 67.6
QL10p041264 Quercus lobata HOM05D005286 ORTHO05D006348 4.3e-49 198.4 161 58.4
Duzib147G1331 Durio zibethinus HOM05D005286 ORTHO05D006348 7.4e-49 197.6 182 56.6
unitig_748.g8002 Utricularia gibba HOM05D005286 ORTHO05D006348 7.4e-49 197.6 145 65.5
Aa31LG1G17980 Aethionema arabicum HOM05D005286 ORTHO05D006348 9.7e-49 197.2 141 64.5
THA.LOC104819345 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 9.7e-49 197.2 156 63.5
Thhalv10004131m.g Eutrema salsugineum HOM05D005286 ORTHO05D006348 2.8e-48 195.7 163 60.1
Cc07_g21020 Coffea canephora HOM05D005286 ORTHO05D006348 3.7e-48 195.3 162 57.4
BcaB02g09762 Brassica carinata HOM05D005286 ORTHO05D006348 4.8e-48 194.9 162 57.4
Potri.007G101700 Populus trichocarpa HOM05D005286 ORTHO05D006348 6.3e-48 194.5 155 60.6
Carub.0008s2471 Capsella rubella HOM05D005286 ORTHO05D006348 8.2e-48 194.1 162 57.4
CSS0028284 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 1.1e-47 193.7 163 60.1
AT5G63910 Arabidopsis thaliana HOM05D005286 ORTHO05D006348 1.4e-47 193.4 144 61.1
THA.LOC104818420 Tarenaya hassleriana HOM05D005286 ORTHO05D006348 1.4e-47 193.4 164 59.8
Sabra07G0083900 Salix brachista HOM05D005286 ORTHO05D006348 3.1e-47 192.2 136 65.4
AL8G41150 Arabidopsis lyrata HOM05D005286 ORTHO05D006348 4.1e-47 191.8 153 60.1
C03p62500 Brassica napus HOM05D005286 ORTHO05D006348 9.0e-47 190.7 163 57.1
BolC3t18507H Brassica oleracea HOM05D005286 ORTHO05D006348 9.0e-47 190.7 163 57.1
CARHR277830 Cardamine hirsuta HOM05D005286 ORTHO05D006348 9.0e-47 190.7 163 58.3
COL.COLO4_35813 Corchorus olitorius HOM05D005286 ORTHO05D006348 9.0e-47 190.7 152 61.8
Sp2g26980 Schrenkiella parvula HOM05D005286 ORTHO05D006348 2.0e-46 189.5 144 61.1
SEGI_22884 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 2.6e-46 189.1 153 62.1
SEGI_35897 Sequoiadendron giganteum HOM05D005286 ORTHO05D006348 2.6e-46 189.1 153 62.1
BcaC01g02644 Brassica carinata HOM05D005286 ORTHO05D006348 3.4e-46 188.7 166 57.8
A06p30530 Brassica napus HOM05D005286 ORTHO05D006348 5.9e-46 188.0 142 60.6
BraA06t26002Z Brassica rapa HOM05D005286 ORTHO05D006348 5.9e-46 188.0 142 60.6
CSS0025452 Camellia sinensis var. sinensis HOM05D005286 ORTHO05D006348 2.2e-45 186.0 163 55.8
Cpa.g.sc37.7 Carica papaya HOM05D005286 ORTHO05D006348 3.2e-44 182.2 140 63.6
Nitab4.5_0000954g0020 Nicotiana tabacum HOM05D005286 ORTHO05D006348 4.2e-44 181.8 161 55.9
SMO119G0327 Selaginella moellendorffii HOM05D005286 ORTHO05D006348 3.0e-42 175.6 143 58.7
Mapoly0032s0088 Marchantia polymorpha HOM05D005286 ORTHO05D006348 3.3e-41 172.2 157 55.4
CBR_g8546 Chara braunii HOM05D005286 ORTHO05D006348 3.8e-37 158.7 138 55.1
Eucgr.I00123 Eucalyptus grandis HOM05D005286 ORTHO05D006348 2.5e-36 156.0 202 45.0
Dinv15529 Davidia involucrata HOM05D005286 ORTHO05D006348 1.1e-33 147.1 94 69.1
Dinv24561 Davidia involucrata HOM05D005286 ORTHO05D006348 1.1e-33 147.1 94 69.1
Haze_10873 Corylus avellana HOM05D005286 ORTHO05D006348 5.9e-22 108.2 73 68.5
DCAR_019994 Daucus carota HOM05D005286 ORTHO05D006348 2.2e-21 106.3 92 59.8
Hund07236 Selenicereus undatus HOM05D005286 ORTHO05D006348 1.9e-20 103.2 73 61.6
DCAR_000205 Daucus carota HOM05D005286 ORTHO05D006348 4.2e-20 102.1 73 60.3
Oeu039334.1 Olea europaea HOM05D005286 ORTHO05D006348 1.4e-18 97.1 73 61.6
CBR_g864 Chara braunii HOM05D005286 ORTHO05D006348 4.0e-18 95.5 137 36.5
Glyma.04G210301 Glycine max HOM05D005286 ORTHO05D006348 2.2e-16 89.7 54 72.2
Nitab4.5_0000432g0040 Nicotiana tabacum HOM05D005286 ORTHO05D006348 2.8e-16 89.4 161 36.6
Gohir.D12G083401 Gossypium hirsutum HOM05D005286 ORTHO05D006348 2.4e-15 86.3 59 62.7
Cre10.g425200 Chlamydomonas reinhardtii HOM05D005286 ORTHO05D006348 1.8e-10 70.1 152 34.2
PRCOL_00003919 Prasinoderma coloniale HOM05D005286 ORTHO05D006348 2.3e-10 69.7 155 32.3


User provided reference genes

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