Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1597 Ceratophyllum demersum HOM05D000515 ORTHO05D005511 1.6e-91 339.3 160 100.0
CDE08G0661 Ceratophyllum demersum HOM05D000515 ORTHO05D005511 6.8e-55 217.6 212 55.2
MD00G1159900 Malus domestica HOM05D000515 ORTHO05D005511 1.0e-34 150.6 215 40.9
Lj1A1086T48 Lonicera japonica HOM05D000515 ORTHO05D005511 2.3e-34 149.4 218 39.4
Duzib128G1588 Durio zibethinus HOM05D000515 ORTHO05D005511 6.6e-34 147.9 200 42.5
Oeu005219.1 Olea europaea HOM05D000515 ORTHO05D005511 2.5e-33 146.0 214 39.3
Ciclev10011059m.g Citrus clementina HOM05D000515 ORTHO05D005511 5.6e-33 144.8 202 40.6
Rhsim04G0113800 Rhododendron simsii HOM05D000515 ORTHO05D005511 5.6e-33 144.8 198 40.9
Prupe.7G028900 Prunus persica HOM05D000515 ORTHO05D005511 9.6e-33 144.1 202 41.1
Sabra06G0023900 Salix brachista HOM05D000515 ORTHO05D005511 1.3e-32 143.7 216 39.8
CSS0006678 Camellia sinensis var. sinensis HOM05D000515 ORTHO05D005511 1.6e-32 143.3 210 39.0
CSS0034372 Camellia sinensis var. sinensis HOM05D000515 ORTHO05D005511 1.6e-32 143.3 210 39.0
COL.COLO4_07034 Corchorus olitorius HOM05D000515 ORTHO05D005511 1.6e-32 143.3 217 37.8
Cfa019981 Carpinus fangiana HOM05D000515 ORTHO05D005511 2.8e-32 142.5 203 39.4
THA.LOC104827449 Tarenaya hassleriana HOM05D000515 ORTHO05D005511 4.8e-32 141.7 213 38.5
Hma1.2p1_0254F.1_g103230 Hydrangea macrophylla HOM05D000515 ORTHO05D005511 6.2e-32 141.4 214 38.8
Cpa.g.sc92.77 Carica papaya HOM05D000515 ORTHO05D005511 1.1e-31 140.6 214 37.9
TAR623G0628 Trochodendron aralioides HOM05D000515 ORTHO05D005511 1.1e-31 140.6 202 41.1
Haze_20252 Corylus avellana HOM05D000515 ORTHO05D005511 1.8e-31 139.8 203 38.9
Thhalv10012664m.g Eutrema salsugineum HOM05D000515 ORTHO05D005511 2.4e-31 139.4 198 39.4
Thecc.05G121100 Theobroma cacao HOM05D000515 ORTHO05D005511 2.4e-31 139.4 202 39.6
CANSAT64G0753 Cannabis sativa HOM05D000515 ORTHO05D005511 3.1e-31 139.0 202 39.1
Potri.006G035700 Populus trichocarpa HOM05D000515 ORTHO05D005511 3.1e-31 139.0 202 40.1
Gohir.A13G001900 Gossypium hirsutum HOM05D000515 ORTHO05D005511 5.3e-31 138.3 202 39.1
Aqoxy2G00507 Aquilegia oxysepala HOM05D000515 ORTHO05D005511 6.9e-31 137.9 217 36.9
FvH4_5g29290 Fragaria vesca HOM05D000515 ORTHO05D005511 6.9e-31 137.9 203 40.4
FAN08G2165 Fragaria x ananassa HOM05D000515 ORTHO05D005511 6.9e-31 137.9 203 40.4
Dinv08255 Davidia involucrata HOM05D000515 ORTHO05D005511 9.0e-31 137.5 205 38.0
Lj1g0003942 Lotus japonicus HOM05D000515 ORTHO05D005511 1.2e-30 137.1 199 40.7
QL07p012138 Quercus lobata HOM05D000515 ORTHO05D005511 1.2e-30 137.1 203 39.4
AL6G14960 Arabidopsis lyrata HOM05D000515 ORTHO05D005511 1.5e-30 136.7 199 40.2
Gohir.D13G001300 Gossypium hirsutum HOM05D000515 ORTHO05D005511 1.5e-30 136.7 202 39.1
Gorai.013G001200 Gossypium raimondii HOM05D000515 ORTHO05D005511 1.5e-30 136.7 202 39.1
BraA10t45149Z Brassica rapa HOM05D000515 ORTHO05D005511 2.6e-30 136.0 200 39.0
Carub.0006s0406 Capsella rubella HOM05D000515 ORTHO05D005511 2.6e-30 136.0 200 38.5
Migut.K00146 Erythranthe guttata HOM05D000515 ORTHO05D005511 2.6e-30 136.0 217 35.9
Sp6g37710 Schrenkiella parvula HOM05D000515 ORTHO05D005511 2.6e-30 136.0 199 38.2
Dinv21481 Davidia involucrata HOM05D000515 ORTHO05D005511 3.4e-30 135.6 201 39.3
Manes.09G002900 Manihot esculenta HOM05D000515 ORTHO05D005511 3.4e-30 135.6 199 39.7
AT5G05130 Arabidopsis thaliana HOM05D000515 ORTHO05D005511 4.5e-30 135.2 199 39.2
A10p31050 Brassica napus HOM05D000515 ORTHO05D005511 4.5e-30 135.2 200 38.5
C09p71570 Brassica napus HOM05D000515 ORTHO05D005511 5.8e-30 134.8 200 38.5
CiPaw.10G042400 Carya illinoinensis HOM05D000515 ORTHO05D005511 5.8e-30 134.8 203 38.9
GSVIVG01025773001 Vitis vinifera HOM05D000515 ORTHO05D005511 5.8e-30 134.8 142 49.3
FAN18G0066 Fragaria x ananassa HOM05D000515 ORTHO05D005511 7.6e-30 134.4 203 39.9
CARHR208140 Cardamine hirsuta HOM05D000515 ORTHO05D005511 1.3e-29 133.7 197 38.6
Lsat_1_v5_gn_7_61860 Lactuca sativa HOM05D000515 ORTHO05D005511 2.2e-29 132.9 210 38.1
Ah.04g150800 Amaranthus hybridus HOM05D000515 ORTHO05D005511 2.9e-29 132.5 203 39.9
BolC9t59918H Brassica oleracea HOM05D000515 ORTHO05D005511 2.9e-29 132.5 200 38.0
RcHm_v2.0_Chr7g0222151 Rosa chinensis HOM05D000515 ORTHO05D005511 2.9e-29 132.5 199 40.2
Hund24560 Selenicereus undatus HOM05D000515 ORTHO05D005511 2.9e-29 132.5 203 40.4
Cc06_g19970 Coffea canephora HOM05D000515 ORTHO05D005511 3.8e-29 132.1 202 37.6
Solyc12g020110.2 Solanum lycopersicum HOM05D000515 ORTHO05D005511 3.8e-29 132.1 212 35.8
Sopen12g011610 Solanum pennellii HOM05D000515 ORTHO05D005511 3.8e-29 132.1 212 35.8
EL10Ac3g07263 Beta vulgaris HOM05D000515 ORTHO05D005511 8.4e-29 131.0 203 38.9
unitig_899.g15089 Utricularia gibba HOM05D000515 ORTHO05D005511 8.4e-29 131.0 208 37.0
PGSC0003DMG400008774 Solanum tuberosum HOM05D000515 ORTHO05D005511 1.1e-28 130.6 212 35.4
Sc19g0008090 Simmondsia chinensis HOM05D000515 ORTHO05D005511 1.4e-28 130.2 203 40.4
MSTRG.26167 Avicennia marina HOM05D000515 ORTHO05D005511 2.4e-28 129.4 207 37.2
Nitab4.5_0010640g0010 Nicotiana tabacum HOM05D000515 ORTHO05D005511 2.4e-28 129.4 210 35.2
TWI74G0167 Tripterygium wilfordii HOM05D000515 ORTHO05D005511 4.2e-28 128.6 219 34.7
vmacro08997 Vaccinium macrocarpon HOM05D000515 ORTHO05D005511 5.4e-28 128.3 198 38.4
Nitab4.5_0000653g0130 Nicotiana tabacum HOM05D000515 ORTHO05D005511 9.3e-28 127.5 210 34.8
CAN.G489.3 Capsicum annuum HOM05D000515 ORTHO05D005511 1.2e-27 127.1 212 34.9
AUR62030289 Chenopodium quinoa HOM05D000515 ORTHO05D005511 1.2e-27 127.1 216 37.0
HanXRQChr13g0406691 Helianthus annuus HOM05D000515 ORTHO05D005511 1.2e-27 127.1 197 39.1
Lalb_Chr22g0357741 Lupinus albus HOM05D000515 ORTHO05D005511 1.2e-27 127.1 208 36.5
AUR62030288 Chenopodium quinoa HOM05D000515 ORTHO05D005511 1.6e-27 126.7 217 37.3
Nn7g36906 Nelumbo nucifera HOM05D000515 ORTHO05D005511 1.6e-27 126.7 217 35.5
PGR142G1719 Punica granatum HOM05D000515 ORTHO05D005511 1.6e-27 126.7 208 37.0
AUR62018373 Chenopodium quinoa HOM05D000515 ORTHO05D005511 2.1e-27 126.3 216 37.0
MBI13_g09206_MAGBIO Magnolia biondii HOM05D000515 ORTHO05D005511 2.1e-27 126.3 210 35.2
AUR62018374 Chenopodium quinoa HOM05D000515 ORTHO05D005511 7.9e-27 124.4 217 36.4
ECA248G3093 Erigeron canadensis HOM05D000515 ORTHO05D005511 7.9e-27 124.4 200 38.0
HPP92_001142 Vanilla planifolia HOM05D000515 ORTHO05D005511 1.0e-26 124.0 222 35.1
Glyma.03G124900 Glycine max HOM05D000515 ORTHO05D005511 2.3e-26 122.9 221 34.8
TAR623G1309 Trochodendron aralioides HOM05D000515 ORTHO05D005511 2.3e-26 122.9 212 36.3
ATR0307G017 Amborella trichopoda HOM05D000515 ORTHO05D005511 1.9e-25 119.8 201 36.3
Ca_27817_v3 Cicer arietinum L. HOM05D000515 ORTHO05D005511 2.5e-25 119.4 230 33.9
DCAR_020590 Daucus carota HOM05D000515 ORTHO05D005511 5.6e-25 118.2 209 35.9
VMungo1383G0097 Vigna mungo HOM05D000515 ORTHO05D005511 5.6e-25 118.2 217 33.2
Prupe.7G029000 Prunus persica HOM05D000515 ORTHO05D005511 9.6e-25 117.5 190 36.8
Medtr7g089190 Medicago truncatula HOM05D000515 ORTHO05D005511 2.8e-24 115.9 226 33.2
SHI24537 Sapria himalayana HOM05D000515 ORTHO05D005511 3.7e-24 115.5 218 32.6
arahy.Tifrunner.gnm1.ann1.WT7LXE Arachis hypogaea HOM05D000515 ORTHO05D005511 4.8e-24 115.2 204 36.3
Eucgr.H00628 Eucalyptus grandis HOM05D000515 ORTHO05D005511 4.8e-24 115.2 185 35.7
TPR.G16098 Trifolium pratense HOM05D000515 ORTHO05D005511 4.8e-24 115.2 216 35.6
arahy.Tifrunner.gnm1.ann1.C6MU4Z Arachis hypogaea HOM05D000515 ORTHO05D005511 1.8e-23 113.2 204 35.8
MD15G1139300 Malus domestica HOM05D000515 ORTHO05D005511 2.4e-23 112.8 172 42.4
SEGI_29164 Sequoiadendron giganteum HOM05D000515 ORTHO05D005511 2.4e-23 112.8 206 32.0
SGA_v2.0_scaffold106G30530 Striga asiatica HOM05D000515 ORTHO05D005511 5.3e-23 111.7 121 47.1
PSO339G0711 Papaver somniferum HOM05D000515 ORTHO05D005511 2.6e-22 109.4 224 30.4
Phvul.001G120300 Phaseolus vulgaris HOM05D000515 ORTHO05D005511 3.4e-22 109.0 216 33.8
PSO384G3808 Papaver somniferum HOM05D000515 ORTHO05D005511 4.5e-22 108.6 224 31.2
Eucgr.K01651 Eucalyptus grandis HOM05D000515 ORTHO05D005511 2.2e-21 106.3 72 65.3
Os07g0642400 Oryza sativa ssp. japonica HOM05D000515 ORTHO05D005511 2.9e-21 105.9 205 35.1
Peaxi162Scf00076g00328 Petunia axillaris HOM05D000515 ORTHO05D005511 2.9e-21 105.9 154 39.0
Zm00001eb329060 Zea mays HOM05D000515 ORTHO05D005511 6.4e-21 104.8 211 32.7
Psat3g080400 Pisum sativum HOM05D000515 ORTHO05D005511 1.9e-20 103.2 120 43.3
Eucgr.K01656 Eucalyptus grandis HOM05D000515 ORTHO05D005511 9.3e-20 100.9 72 61.1
SMO169G0179 Selaginella moellendorffii HOM05D000515 ORTHO05D005511 2.7e-19 99.4 232 28.0
Potri.016G033800 Populus trichocarpa HOM05D000515 ORTHO05D005511 6.0e-19 98.2 197 30.5
Potri.016G033600 Populus trichocarpa HOM05D000515 ORTHO05D005511 1.3e-18 97.1 185 33.5
BcaC06g32222 Brassica carinata HOM05D000515 ORTHO05D005511 3.0e-18 95.9 86 52.3
MBI13_g46381_MAGBIO Magnolia biondii HOM05D000515 ORTHO05D005511 5.1e-18 95.1 57 64.9
DCAR_009135 Daucus carota HOM05D000515 ORTHO05D005511 9.6e-17 90.9 161 32.9
Pp3c24_8230 Physcomitrium patens HOM05D000515 ORTHO05D005511 2.1e-16 89.7 210 29.0
Sabra16G0036500 Salix brachista HOM05D000515 ORTHO05D005511 4.8e-16 88.6 161 33.5
AagrBONN_evm.TU.Sc2ySwM_344.3828 Anthoceros agrestis HOM05D000515 ORTHO05D005511 5.3e-15 85.1 215 27.9
Sabra16G0036600 Salix brachista HOM05D000515 ORTHO05D005511 5.3e-15 85.1 70 52.9
Sabra16G0036700 Salix brachista HOM05D000515 ORTHO05D005511 9.0e-15 84.3 83 43.4
Sabra16G0054300 Salix brachista HOM05D000515 ORTHO05D005511 1.2e-14 84.0 81 44.4
MCO11G082 Micromonas commoda HOM05D000515 ORTHO05D005511 1.5e-14 83.6 73 50.7
Potri.016G034000 Populus trichocarpa HOM05D000515 ORTHO05D005511 1.5e-14 83.6 75 46.7
SMO203G0195 Selaginella moellendorffii HOM05D000515 ORTHO05D005511 2.0e-14 83.2 86 45.3
Potri.016G033700 Populus trichocarpa HOM05D000515 ORTHO05D005511 2.6e-14 82.8 75 48.0
Sabra16G0054400 Salix brachista HOM05D000515 ORTHO05D005511 2.2e-13 79.7 77 45.5
Zm00001eb020820 Zea mays HOM05D000515 ORTHO05D005511 1.6e-11 73.6 67 52.2
DCAR_009131 Daucus carota HOM05D000515 ORTHO05D005511 2.7e-11 72.8 70 50.0
Cre14.g614400 Chlamydomonas reinhardtii HOM05D000515 ORTHO05D005511 1.0e-10 70.9 77 48.1
PSO675G0750 Papaver somniferum HOM05D000515 ORTHO05D005511 1.8e-10 70.1 98 31.6
PSO063G6687 Papaver somniferum HOM05D000515 ORTHO05D005511 5.1e-10 68.6 75 46.7
HPP92_001115 Vanilla planifolia HOM05D000515 ORTHO05D025478 6.7e-10 68.2 162 30.2
QL11p004347 Quercus lobata HOM05D000515 ORTHO05D005511 1.6e-08 63.5 69 49.3
arahy.Tifrunner.gnm1.ann1.1JC5TC Arachis hypogaea HOM05D000515 ORTHO05D005511 3.4e-06 55.8 71 38.0


User provided reference genes

Program Settings