Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 2.2e-108 395.6 191 100.0
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 1.3e-92 343.2 178 93.8
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 2.3e-49 199.5 174 57.5
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 8.7e-49 197.6 179 56.4
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.5e-48 196.8 181 56.4
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 1.9e-48 196.4 178 57.9
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 2.5e-48 196.1 181 53.6
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 4.3e-48 195.3 179 54.2
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 1.3e-47 193.7 178 56.7
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.6e-47 193.4 181 55.2
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 2.1e-47 193.0 178 52.2
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 2.8e-47 192.6 178 51.1
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 2.8e-47 192.6 175 57.7
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 4.8e-47 191.8 178 54.5
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 6.3e-47 191.4 179 51.4
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 6.3e-47 191.4 178 53.4
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.1e-46 190.7 179 51.4
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.4e-46 190.3 178 52.8
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 3.1e-46 189.1 179 52.0
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 3.1e-46 189.1 179 53.1
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 4.1e-46 188.7 179 54.2
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 5.3e-46 188.3 179 50.8
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 9.0e-46 187.6 173 52.0
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 2.0e-45 186.4 177 52.0
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 3.4e-45 185.7 172 53.5
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 3.4e-45 185.7 177 52.5
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 4.5e-45 185.3 178 52.8
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 5.9e-45 184.9 179 53.1
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 7.6e-45 184.5 179 53.1
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 1.0e-44 184.1 179 50.3
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 1.0e-44 184.1 171 53.2
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.0e-44 184.1 181 50.8
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 1.3e-44 183.7 179 50.3
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 3.8e-44 182.2 171 50.9
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 3.8e-44 182.2 177 52.0
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 3.8e-44 182.2 178 51.7
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 3.8e-44 182.2 195 48.7
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 3.8e-44 182.2 180 50.6
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 6.5e-44 181.4 176 50.6
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 8.5e-44 181.0 178 51.7
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 8.5e-44 181.0 178 50.6
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 8.5e-44 181.0 173 50.9
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 8.5e-44 181.0 178 48.9
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 8.5e-44 181.0 178 48.9
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 8.5e-44 181.0 177 52.5
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.4e-43 180.3 183 49.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 2.5e-43 179.5 178 49.4
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 3.2e-43 179.1 172 51.7
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 4.2e-43 178.7 178 49.4
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 5.5e-43 178.3 179 53.1
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 5.5e-43 178.3 178 51.1
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 7.2e-43 177.9 179 50.8
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.2e-42 177.2 172 51.7
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.2e-42 177.2 180 52.2
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 2.7e-42 176.0 178 48.3
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 2.7e-42 176.0 176 50.0
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 3.6e-42 175.6 178 48.9
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 4.6e-42 175.3 178 47.2
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.3e-41 173.7 172 51.7
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 1.3e-41 173.7 179 46.9
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 3.9e-41 172.2 178 50.0
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 6.7e-41 171.4 178 50.0
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 6.7e-41 171.4 178 48.9
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 6.7e-41 171.4 180 50.0
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 6.7e-41 171.4 180 50.0
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 1.1e-40 170.6 178 48.3
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 3.3e-40 169.1 178 48.9
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 5.7e-40 168.3 173 49.7
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 7.4e-40 167.9 176 48.3
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 9.7e-40 167.5 178 46.1
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 1.3e-39 167.2 180 47.8
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 2.2e-39 166.4 187 47.6
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 3.7e-39 165.6 128 57.8
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 4.8e-39 165.2 176 50.0
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 6.3e-39 164.9 178 48.3
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 6.3e-39 164.9 178 48.3
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 8.2e-39 164.5 173 51.4
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 2.4e-38 162.9 179 44.7
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 3.1e-38 162.5 178 47.8
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 5.3e-38 161.8 129 58.1
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 1.2e-37 160.6 178 47.8
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 1.5e-37 160.2 154 53.9
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 5.9e-37 158.3 182 44.0
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.7e-36 156.8 177 45.8
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 2.9e-36 156.0 142 52.1
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 7.9e-34 147.9 170 44.7
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 2.3e-33 146.4 170 45.9
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.1e-30 137.5 179 39.1
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 1.8e-30 136.7 180 42.2
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 1.8e-30 136.7 180 41.7
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 3.4e-29 132.5 179 38.5
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 4.5e-29 132.1 180 41.1
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 4.5e-29 132.1 180 41.1
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 4.5e-29 132.1 180 41.1
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 5.9e-29 131.7 177 41.2
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 1.4e-27 127.1 176 40.9
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 1.9e-27 126.7 180 40.0
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 2.5e-27 126.3 176 39.8
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 4.2e-27 125.6 172 40.7
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 5.5e-27 125.2 189 38.1
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.6e-26 123.6 176 38.6
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 9.1e-22 107.8 142 39.4
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 1.0e-20 104.4 180 33.9
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 6.5e-20 101.7 196 33.2
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 8.0e-18 94.7 104 50.0


User provided reference genes

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