Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1568 Ceratophyllum demersum HOM05D000329 ORTHO05D005330 2.4e-254 881.7 455 100.0
Dinv06015 Davidia involucrata HOM05D000329 ORTHO05D005330 3.1e-137 492.7 457 57.1
TAR636G0200 Trochodendron aralioides HOM05D000329 ORTHO05D005330 2.6e-136 489.6 457 55.6
Actinidia39997 Actinidia chinensis HOM05D000329 ORTHO05D005330 3.2e-134 482.6 460 55.2
Atru.chr2.977 Acer truncatum HOM05D000329 ORTHO05D005330 1.6e-133 480.3 457 54.5
Nn1g02807 Nelumbo nucifera HOM05D000329 ORTHO05D005330 1.6e-133 480.3 454 56.8
Atru.chr2.952 Acer truncatum HOM05D000329 ORTHO05D005330 1.0e-132 477.6 457 54.3
Manes.09G147900 Manihot esculenta HOM05D000329 ORTHO05D005330 1.4e-132 477.2 456 55.5
Ciclev10018568m.g Citrus clementina HOM05D000329 ORTHO05D005330 4.0e-132 475.7 457 55.1
Duzib106G0267 Durio zibethinus HOM05D000329 ORTHO05D005330 5.2e-132 475.3 455 55.2
MD04G1230100 Malus domestica HOM05D000329 ORTHO05D005330 1.5e-131 473.8 448 54.7
GSVIVG01023507001 Vitis vinifera HOM05D000329 ORTHO05D005330 2.0e-131 473.4 460 55.7
Thecc.05G271000 Theobroma cacao HOM05D000329 ORTHO05D005330 3.3e-131 472.6 454 55.3
COL.COLO4_15478 Corchorus olitorius HOM05D000329 ORTHO05D005330 2.8e-130 469.5 454 55.1
FvH4_6g01900 Fragaria vesca HOM05D000329 ORTHO05D005330 8.2e-130 468.0 448 55.1
Carub.0003s0365 Capsella rubella HOM05D000329 ORTHO05D005330 1.4e-129 467.2 453 55.4
FAN09G2051 Fragaria x ananassa HOM05D000329 ORTHO05D005330 1.4e-129 467.2 448 55.1
AT3G04490 Arabidopsis thaliana HOM05D000329 ORTHO05D005330 1.8e-129 466.8 453 55.4
Sopen12g010860 Solanum pennellii HOM05D000329 ORTHO05D005330 3.1e-129 466.1 451 54.5
CARHR078650 Cardamine hirsuta HOM05D000329 ORTHO05D005330 4.1e-129 465.7 453 55.2
RcHm_v2.0_Chr3g0449631 Rosa chinensis HOM05D000329 ORTHO05D005330 4.1e-129 465.7 448 55.4
C05p62760 Brassica napus HOM05D000329 ORTHO05D005330 5.3e-129 465.3 453 55.6
FAN14G5238 Fragaria x ananassa HOM05D000329 ORTHO05D005330 5.3e-129 465.3 448 54.9
BcaC05g30221 Brassica carinata HOM05D000329 ORTHO05D005330 7.0e-129 464.9 450 55.6
BolC5t34929H Brassica oleracea HOM05D000329 ORTHO05D005330 7.0e-129 464.9 453 55.6
Ca_09463_v3 Cicer arietinum L. HOM05D000329 ORTHO05D005330 7.0e-129 464.9 452 53.3
THA.LOC104827286 Tarenaya hassleriana HOM05D000329 ORTHO05D005330 9.1e-129 464.5 452 54.9
Medtr7g115710 Medicago truncatula HOM05D000329 ORTHO05D005330 1.2e-128 464.2 452 53.1
PSO063G2047 Papaver somniferum HOM05D000329 ORTHO05D005330 1.2e-128 464.2 460 53.7
A05p42990 Brassica napus HOM05D000329 ORTHO05D005330 1.6e-128 463.8 453 55.4
AL3G14470 Arabidopsis lyrata HOM05D000329 ORTHO05D005330 2.7e-128 463.0 452 55.3
FAN05G0322 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.7e-128 463.0 448 54.2
Solyc12g027580.3 Solanum lycopersicum HOM05D000329 ORTHO05D005330 5.9e-128 461.8 451 54.1
BraA05t23043Z Brassica rapa HOM05D000329 ORTHO05D005330 7.7e-128 461.5 453 55.2
SGA_v2.0_scaffold50G18503 Striga asiatica HOM05D000329 ORTHO05D005330 7.7e-128 461.5 450 55.6
Sp3g03340 Schrenkiella parvula HOM05D000329 ORTHO05D005330 1.0e-127 461.1 453 54.7
Potri.019G019100 Populus trichocarpa HOM05D000329 ORTHO05D005330 1.7e-127 460.3 452 55.1
ATR0736G139 Amborella trichopoda HOM05D000329 ORTHO05D005330 2.2e-127 459.9 458 53.9
PSO017G0764 Papaver somniferum HOM05D000329 ORTHO05D005330 2.9e-127 459.5 460 53.3
TPR.G6911 Trifolium pratense HOM05D000329 ORTHO05D005330 5.0e-127 458.8 452 52.9
FAN05G4177 Fragaria x ananassa HOM05D000329 ORTHO05D005330 8.5e-127 458.0 453 53.9
Aa31LG5G14930 Aethionema arabicum HOM05D000329 ORTHO05D005330 1.1e-126 457.6 453 55.2
Aqoxy2G03671 Aquilegia oxysepala HOM05D000329 ORTHO05D005330 1.9e-126 456.8 448 53.6
Cc02_g08850 Coffea canephora HOM05D000329 ORTHO05D005330 1.9e-126 456.8 457 54.3
Glyma.03G251100 Glycine max HOM05D000329 ORTHO05D005330 1.9e-126 456.8 452 52.2
Sabra19G0031800 Salix brachista HOM05D000329 ORTHO05D005330 1.9e-126 456.8 452 54.4
TWI56G0006 Tripterygium wilfordii HOM05D000329 ORTHO05D005330 1.9e-126 456.8 456 52.9
Psat3g006480 Pisum sativum HOM05D000329 ORTHO05D005330 3.2e-126 456.1 452 53.3
vmacro19990 Vaccinium macrocarpon HOM05D000329 ORTHO05D005330 4.2e-126 455.7 491 50.9
Lj1g0020261 Lotus japonicus HOM05D000329 ORTHO05D005330 5.5e-126 455.3 452 52.7
Eucgr.H04230 Eucalyptus grandis HOM05D000329 ORTHO05D005330 1.6e-125 453.8 457 52.3
Gohir.A08G217300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 2.7e-125 453.0 453 53.9
BcaC05g30194 Brassica carinata HOM05D000329 ORTHO05D005330 3.6e-125 452.6 453 54.5
CANSAT54G2567 Cannabis sativa HOM05D000329 ORTHO05D005330 4.7e-125 452.2 448 54.2
VMungo0540G0180 Vigna mungo HOM05D000329 ORTHO05D005330 4.7e-125 452.2 452 52.4
Glyma.19G248400 Glycine max HOM05D000329 ORTHO05D005330 6.1e-125 451.8 452 51.8
Gorai.004G249100 Gossypium raimondii HOM05D000329 ORTHO05D005330 8.0e-125 451.4 453 53.6
Peaxi162Scf00304g10137 Petunia axillaris HOM05D000329 ORTHO05D005330 1.0e-124 451.1 451 52.5
BcaC05g29938 Brassica carinata HOM05D000329 ORTHO05D005330 1.8e-124 450.3 453 55.0
CiPaw.08G118500 Carya illinoinensis HOM05D000329 ORTHO05D005330 1.8e-124 450.3 455 53.4
Lalb_Chr18g0044041 Lupinus albus HOM05D000329 ORTHO05D005330 3.0e-124 449.5 452 52.2
MSTRG.316 Avicennia marina HOM05D000329 ORTHO05D005330 6.8e-124 448.4 456 51.3
Phvul.006G105600 Phaseolus vulgaris HOM05D000329 ORTHO05D005330 1.5e-123 447.2 452 51.5
Oeu014525.1 Olea europaea HOM05D000329 ORTHO05D005330 2.0e-123 446.8 456 53.1
arahy.Tifrunner.gnm1.ann1.LXR25M Arachis hypogaea HOM05D000329 ORTHO05D005330 4.4e-123 445.7 452 51.5
MELO3C010156.2 Cucumis melo HOM05D000329 ORTHO05D005330 1.7e-122 443.7 457 51.9
CsaV3_1G045290 Cucumis sativus L. HOM05D000329 ORTHO05D005330 1.7e-122 443.7 457 51.9
Duzib177G0982 Durio zibethinus HOM05D000329 ORTHO05D005330 1.2e-120 437.6 455 52.7
PGR004G1157 Punica granatum HOM05D000329 ORTHO05D005330 3.5e-120 436.0 458 50.9
Migut.F01542 Erythranthe guttata HOM05D000329 ORTHO05D005330 3.8e-119 432.6 457 50.8
Cpa.g.sc162.46 Carica papaya HOM05D000329 ORTHO05D005330 1.1e-118 431.0 457 53.0
Ah.06g191840 Amaranthus hybridus HOM05D000329 ORTHO05D005330 2.3e-116 423.3 449 49.7
ECA238G1533 Erigeron canadensis HOM05D000329 ORTHO05D005330 3.0e-116 422.9 455 49.5
Sed0007400 Sechium edule HOM05D000329 ORTHO05D005330 3.0e-116 422.9 457 48.8
HanXRQChr13g0397671 Helianthus annuus HOM05D000329 ORTHO05D005330 2.0e-115 420.2 458 48.9
FAN14G2464 Fragaria x ananassa HOM05D000329 ORTHO05D005330 2.6e-115 419.9 448 50.9
Lsat_1_v5_gn_2_16061 Lactuca sativa HOM05D000329 ORTHO05D005330 4.4e-115 419.1 457 49.0
Cfa006349 Carpinus fangiana HOM05D000329 ORTHO05D005330 1.7e-114 417.2 454 52.0
Hma1.2p1_1512F.1_g287930 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 4.9e-114 415.6 379 56.7
AUR62040926 Chenopodium quinoa HOM05D000329 ORTHO05D005330 7.8e-112 408.3 453 49.2
QL03p030502 Quercus lobata HOM05D000329 ORTHO05D005330 1.7e-111 407.1 377 57.0
Os10g0477000 Oryza sativa ssp. japonica HOM05D000329 ORTHO05D005330 3.8e-111 406.0 458 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3774 Anthoceros agrestis HOM05D000329 ORTHO05D005330 9.5e-110 401.4 464 45.5
AUR62004837 Chenopodium quinoa HOM05D000329 ORTHO05D005330 2.8e-109 399.8 453 48.6
CSS0019027 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 1.0e-108 397.9 465 48.6
Lj2C42G9 Lonicera japonica HOM05D000329 ORTHO05D005330 3.0e-108 396.4 457 50.1
Zm00001eb045870 Zea mays HOM05D000329 ORTHO05D005330 2.0e-107 393.7 457 47.9
Mapoly0091s0014 Marchantia polymorpha HOM05D000329 ORTHO05D005330 5.8e-107 392.1 466 45.1
Pp3c6_27570 Physcomitrium patens HOM05D000329 ORTHO05D005330 1.1e-105 387.9 466 44.6
Sc09g0004230 Simmondsia chinensis HOM05D000329 ORTHO05D005330 3.2e-105 386.3 387 53.5
Prupe.7G018700 Prunus persica HOM05D000329 ORTHO05D005330 1.6e-104 384.0 448 47.3
Thhalv10019943m.g Eutrema salsugineum HOM05D000329 ORTHO05D005330 2.1e-101 373.6 450 48.2
ClCG06G009520 Citrullus lanatus HOM05D000329 ORTHO05D005330 1.2e-99 367.9 378 53.4
Gohir.D08G234300 Gossypium hirsutum HOM05D000329 ORTHO05D005330 5.8e-99 365.5 453 47.0
EL10Ac4g09016 Beta vulgaris HOM05D000329 ORTHO05D005330 3.2e-97 359.8 452 45.4
SalBow6G5354 Salvia bowleyana HOM05D000329 ORTHO05D005330 5.4e-97 359.0 354 53.4
Hma1.2p1_1512F.1_g287950 Hydrangea macrophylla HOM05D000329 ORTHO05D005330 7.8e-96 355.1 384 50.3
SMO356G0150 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 2.8e-93 346.7 466 42.7
HPP92_025585 Vanilla planifolia HOM05D000329 ORTHO05D005330 1.8e-92 344.0 455 44.0
Nitab4.5_0003285g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.0e-87 326.6 422 45.3
CBR_g8586 Chara braunii HOM05D000329 ORTHO05D005330 1.2e-85 321.2 484 37.6
CAN.G155.4 Capsicum annuum HOM05D000329 ORTHO05D005330 4.7e-85 319.3 309 53.7
Pp3c16_19950 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.9e-79 299.7 460 38.3
Pp3c16_19964 Physcomitrium patens HOM05D000329 ORTHO05D005330 3.9e-79 299.7 460 38.3
DCAR_000980 Daucus carota HOM05D000329 ORTHO05D005330 6.9e-76 288.9 293 49.8
unitig_46.g18343 Utricularia gibba HOM05D000329 ORTHO05D005330 1.9e-73 280.8 401 40.1
CSS0000359 Camellia sinensis var. sinensis HOM05D000329 ORTHO05D005330 9.6e-62 241.9 245 51.4
Haze_04432 Corylus avellana HOM05D000329 ORTHO05D005330 8.4e-50 202.2 227 47.6
Haze_04433 Corylus avellana HOM05D000329 ORTHO05D005330 1.1e-46 191.8 185 57.3
HPP92_025571 Vanilla planifolia HOM05D000329 ORTHO05D005330 2.2e-45 187.6 243 44.4
Sabra19G0028500 Salix brachista HOM05D000329 ORTHO05D000833 5.3e-44 183.0 182 54.4
Nitab4.5_0000432g0110 Nicotiana tabacum HOM05D000329 ORTHO05D005330 1.3e-42 178.3 149 58.4
HPP92_025621 Vanilla planifolia HOM05D000329 ORTHO05D005330 2.2e-42 177.6 213 47.4
Nitab4.5_0000432g0090 Nicotiana tabacum HOM05D000329 ORTHO05D005330 5.1e-39 166.4 175 52.0
SEGI_29711 Sequoiadendron giganteum HOM05D000329 ORTHO05D005330 9.1e-36 155.6 184 45.7
Nitab4.5_0025717g0010 Nicotiana tabacum HOM05D000329 ORTHO05D005330 3.8e-34 150.2 207 41.5
arahy.Tifrunner.gnm1.ann1.I5XT77 Arachis hypogaea HOM05D000329 ORTHO05D005330 7.2e-33 146.0 132 53.0
HanXRQChr14g0434591 Helianthus annuus HOM05D000329 ORTHO05D005330 1.2e-27 128.6 162 43.8
MBI10_g44932_MAGBIO Magnolia biondii HOM05D000329 ORTHO05D005330 3.5e-27 127.1 354 30.8
SMO002G0004 Selaginella moellendorffii HOM05D000329 ORTHO05D005330 5.5e-25 119.8 459 25.7
Rhsim10G0071600 Rhododendron simsii HOM05D000329 ORTHO05D005330 5.5e-17 93.2 79 51.9
Solyc12g027560.1 Solanum lycopersicum HOM05D000329 ORTHO05D005330 1.6e-16 91.7 79 54.4
PRCOL_00003022 Prasinoderma coloniale HOM05D000329 ORTHO05D005330 1.5e-14 85.1 428 24.3
Cre09.g404350 Chlamydomonas reinhardtii HOM05D000329 ORTHO05D005330 3.7e-13 80.5 318 26.7
Rhsim05G0128300 Rhododendron simsii HOM05D000329 ORTHO05D005330 8.3e-13 79.3 177 32.8
PRCOL_00000821 Prasinoderma coloniale HOM05D003429 ORTHO05D003873 2.5e-09 67.8 283 25.1
SHI23206 Sapria himalayana HOM05D000329 ORTHO05D005330 7.2e-09 66.2 72 43.1
Nitab4.5_0000432g0100 Nicotiana tabacum HOM05D000329 ORTHO05D005330 9.4e-09 65.9 76 44.7
TWI63G1019 Tripterygium wilfordii HOM05D003429 ORTHO05D003873 1.6e-08 65.1 307 23.5
Cfa012903 Carpinus fangiana HOM05D000329 ORTHO05D005330 6.1e-08 63.2 46 65.2
Haze_05933 Corylus avellana HOM05D000329 ORTHO05D005330 6.1e-08 63.2 59 52.5
arahy.Tifrunner.gnm1.ann1.P7SNS1 Arachis hypogaea HOM05D003429 ORTHO05D003873 8.0e-08 62.8 287 25.1
QL03p030482 Quercus lobata HOM05D000329 ORTHO05D005330 1.5e-06 58.5 74 39.2
arahy.Tifrunner.gnm1.ann1.3RNG04 Arachis hypogaea HOM05D003429 ORTHO05D003873 2.0e-06 58.2 242 24.8
Lsat_1_v5_gn_0_32021 Lactuca sativa HOM05D000147 ORTHO05D013131 3.4e-06 57.4 115 33.0
SMO367G0627 Selaginella moellendorffii HOM05D003429 ORTHO05D003873 9.8e-06 55.8 283 24.4


User provided reference genes

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