Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 3.8e-238 827.8 425 100.0
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 2.2e-193 679.1 400 87.5
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 7.2e-112 408.3 423 55.3
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 2.0e-109 400.2 429 53.1
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 9.8e-109 397.9 413 53.8
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.3e-108 397.5 403 52.9
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 3.7e-108 396.0 375 56.5
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 4.9e-108 395.6 383 55.6
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 5.4e-107 392.1 367 56.9
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 4.5e-106 389.0 383 55.4
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 2.3e-105 386.7 367 56.9
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 2.3e-105 386.7 424 50.7
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 5.0e-105 385.6 424 51.7
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 8.6e-105 384.8 411 52.6
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 1.1e-104 384.4 412 51.5
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 1.1e-104 384.4 382 53.4
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 1.5e-104 384.0 411 52.1
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 2.5e-104 383.3 366 56.3
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 3.3e-104 382.9 366 56.0
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.8e-103 379.8 412 50.7
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 4.7e-103 379.0 424 51.2
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 8.0e-103 378.3 363 55.6
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 1.8e-102 377.1 371 54.7
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 3.1e-102 376.3 362 55.5
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 4.0e-102 375.9 371 52.8
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 6.8e-102 375.2 363 54.3
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.8e-102 375.2 412 50.5
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.8e-102 375.2 412 50.0
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 8.9e-102 374.8 363 55.1
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 1.5e-101 374.0 360 52.8
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 2.6e-101 373.2 364 55.8
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.8e-101 372.1 362 55.0
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 7.5e-101 371.7 364 53.3
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 9.8e-101 371.3 407 51.4
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 4.9e-100 369.0 365 53.4
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 4.1e-99 365.9 364 54.9
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 4.1e-99 365.9 417 49.4
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 7.0e-99 365.2 426 50.5
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 9.2e-99 364.8 425 49.9
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.7e-98 363.2 364 54.9
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 2.7e-98 363.2 364 54.9
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 3.9e-97 359.4 363 51.2
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 3.9e-97 359.4 428 48.1
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 3.9e-97 359.4 389 51.4
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 1.5e-96 357.5 368 54.1
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 1.5e-96 357.5 426 47.9
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 1.6e-95 354.0 371 54.7
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 3.6e-95 352.8 404 48.5
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 2.3e-94 350.1 364 53.3
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 8.9e-94 348.2 374 50.3
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.2e-93 347.8 374 49.5
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 1.5e-93 347.4 415 48.4
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 7.5e-93 345.1 419 50.4
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 7.5e-93 345.1 366 51.4
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 2.9e-92 343.2 361 51.8
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 1.4e-91 340.9 384 49.2
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 1.4e-91 340.9 366 50.0
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.2e-91 339.7 385 48.6
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 4.1e-91 339.3 363 51.5
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 4.1e-91 339.3 402 49.5
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 5.4e-91 339.0 375 49.1
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 1.2e-90 337.8 382 49.0
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 2.1e-90 337.0 374 49.7
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 2.7e-90 336.7 382 49.0
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 4.6e-90 335.9 374 49.5
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.3e-89 334.3 384 49.0
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 1.3e-89 334.3 369 49.6
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 2.3e-89 333.6 374 48.9
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 2.3e-89 333.6 374 48.9
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 2.3e-89 333.6 374 48.4
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 2.3e-89 333.6 411 47.7
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 2.3e-89 333.6 431 45.7
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 3.0e-89 333.2 385 47.5
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 6.6e-89 332.0 411 47.4
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 5.6e-88 328.9 369 48.5
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 7.3e-88 328.6 386 47.9
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 9.5e-88 328.2 373 47.5
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 2.1e-87 327.0 365 50.4
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 2.1e-87 327.0 365 49.9
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 1.8e-86 323.9 416 45.9
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 2.0e-85 320.5 368 47.8
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 3.4e-85 319.7 367 50.4
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 5.8e-85 318.9 364 49.5
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 9.9e-85 318.2 372 49.7
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 2.9e-84 316.6 357 49.9
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 4.9e-84 315.8 370 48.6
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.9e-83 313.9 367 50.4
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 9.2e-83 311.6 352 51.7
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 1.2e-82 311.2 363 49.9
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 3.5e-82 309.7 364 49.5
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 3.5e-82 309.7 364 49.5
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.0e-81 308.1 321 54.8
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 1.0e-81 308.1 365 47.9
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 1.7e-81 307.4 358 48.3
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 8.6e-81 305.1 370 47.8
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 8.6e-81 305.1 358 48.0
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 2.8e-79 300.1 370 48.4
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 2.8e-79 300.1 322 51.6
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 4.4e-77 292.7 332 50.3
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 7.6e-77 292.0 374 47.3
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 1.3e-76 291.2 306 52.6
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.7e-76 290.8 370 45.4
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 1.1e-75 288.1 371 47.2
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 1.9e-75 287.3 351 45.9
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 1.3e-73 281.2 385 43.6
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 1.2e-71 274.6 417 42.7
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 2.8e-71 273.5 363 43.5
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 4.4e-69 266.2 323 46.1
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 3.5e-66 256.5 322 48.8
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.6e-63 247.7 297 48.5
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 2.5e-56 223.8 348 37.6
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 4.3e-56 223.0 310 45.2
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 2.4e-54 217.2 226 50.9
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 3.1e-54 216.9 166 60.8
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 6.9e-54 215.7 360 37.5
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.0e-52 211.8 368 38.6
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 1.0e-49 201.8 241 49.8
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 2.3e-49 200.7 382 35.9
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 6.7e-49 199.1 382 39.5
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.1e-48 198.4 221 50.2
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 9.7e-40 168.7 205 46.8
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 6.3e-23 112.8 329 28.9
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.8e-22 111.3 265 34.0
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 2.9e-20 104.0 188 34.6
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 4.2e-19 100.1 165 37.0
PRCOL_00003529 Prasinoderma coloniale HOM05D006219 ORTHO05D007562 1.1e-14 85.5 322 26.7
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 2.9e-12 77.4 345 25.2
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 2.7e-10 70.9 147 32.7
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 2.3e-09 67.8 76 46.1
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 4.0e-09 67.0 83 45.8
TAR362G0073 Trochodendron aralioides HOM05D001652 ORTHO05D001768 4.8e-07 60.1 76 47.4


User provided reference genes

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