Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 5.4e-34 147.1 76 100.0
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 5.0e-24 114.0 61 90.2
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 2.1e-14 82.0 62 72.6
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 2.4e-13 78.6 62 71.0
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 2.4e-13 78.6 68 66.2
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 3.1e-13 78.2 53 73.6
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 8.9e-13 76.6 77 62.3
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 1.5e-12 75.9 63 68.3
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 2.0e-12 75.5 61 67.2
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 2.0e-12 75.5 62 66.1
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 2.0e-12 75.5 62 66.1
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 2.6e-12 75.1 62 69.4
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 2.6e-12 75.1 62 64.5
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 2.6e-12 75.1 65 66.2
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 3.4e-12 74.7 62 66.1
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 5.8e-12 73.9 53 75.5
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 5.8e-12 73.9 62 69.4
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 9.9e-12 73.2 54 74.1
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 9.9e-12 73.2 51 76.5
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 9.9e-12 73.2 53 77.4
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 9.9e-12 73.2 62 66.1
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 1.3e-11 72.8 66 62.1
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 1.7e-11 72.4 62 64.5
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 1.7e-11 72.4 52 73.1
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 2.2e-11 72.0 69 56.5
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 2.9e-11 71.6 54 72.2
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 2.9e-11 71.6 53 69.8
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 3.8e-11 71.2 75 54.7
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 3.8e-11 71.2 53 69.8
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 4.9e-11 70.9 52 69.2
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 8.4e-11 70.1 54 66.7
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 8.4e-11 70.1 64 64.1
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 1.1e-10 69.7 62 58.1
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 1.4e-10 69.3 62 58.1
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 1.4e-10 69.3 69 59.4
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 2.4e-10 68.6 62 61.3
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 3.2e-10 68.2 62 61.3
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 4.1e-10 67.8 53 66.0
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 4.1e-10 67.8 53 67.9
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 5.4e-10 67.4 54 63.0
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 7.1e-10 67.0 62 58.1
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 7.1e-10 67.0 55 61.8
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 7.1e-10 67.0 56 71.4
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 9.2e-10 66.6 65 58.5
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 9.2e-10 66.6 54 63.0
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 9.2e-10 66.6 54 70.4
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 1.2e-09 66.2 62 61.3
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 1.2e-09 66.2 53 64.2
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 1.6e-09 65.9 54 70.4
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 2.1e-09 65.5 55 70.9
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 2.1e-09 65.5 55 69.1
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 2.1e-09 65.5 63 61.9
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 2.1e-09 65.5 61 67.2
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 2.1e-09 65.5 56 66.1
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 2.1e-09 65.5 56 67.9
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 2.7e-09 65.1 54 68.5
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 3.5e-09 64.7 54 68.5
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 3.5e-09 64.7 56 66.1
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 4.6e-09 64.3 55 69.1
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 6.0e-09 63.9 55 69.1
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 1.3e-08 62.8 53 60.4
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 1.3e-08 62.8 76 50.0
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 1.3e-08 62.8 41 68.3
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 1.7e-08 62.4 55 69.1
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 3.0e-08 61.6 55 67.3
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 1.5e-07 59.3 61 62.3
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 2.5e-07 58.5 56 60.7
AagrBONN_evm.TU.Sc2ySwM_117.1449 Anthoceros agrestis HOM05D008117 ORTHO05D010265 4.3e-07 57.8 57 47.4
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 4.3e-07 57.8 55 63.6
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 4.3e-07 57.8 55 63.6
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 7.3e-07 57.0 42 71.4


User provided reference genes

Program Settings