Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 0.0e+00 1241.5 621 100.0
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 7.6e-203 711.1 611 58.1
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 1.3e-197 693.7 603 59.0
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 8.2e-197 691.0 598 57.5
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 2.6e-195 686.0 620 56.6
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 3.2e-193 679.1 616 55.4
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 3.2e-193 679.1 603 57.5
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 3.2e-193 679.1 618 56.3
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 1.6e-192 676.8 610 55.2
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 5.0e-186 655.2 623 54.9
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 2.7e-184 649.4 605 54.7
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 7.4e-182 641.3 596 54.7
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 2.2e-181 639.8 565 57.9
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 2.4e-180 636.3 611 52.9
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 4.1e-180 635.6 594 54.0
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 5.3e-180 635.2 580 55.7
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 2.0e-179 633.3 608 54.6
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 3.5e-179 632.5 608 53.0
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 5.9e-179 631.7 603 55.1
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 1.0e-178 630.9 611 51.9
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 1.0e-178 630.9 624 53.2
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 1.4e-177 627.1 617 52.8
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 1.9e-177 626.7 614 52.1
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 9.4e-177 624.4 608 53.6
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 1.2e-176 624.0 611 53.7
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 2.1e-176 623.2 582 54.6
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 2.7e-176 622.9 613 53.7
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 3.6e-176 622.5 583 55.1
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 8.0e-176 621.3 613 53.5
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 1.8e-175 620.2 619 52.3
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 2.3e-175 619.8 613 53.3
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 1.1e-174 617.5 603 53.1
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 1.5e-174 617.1 611 51.2
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 2.6e-174 616.3 614 53.6
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 2.6e-174 616.3 580 55.2
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 3.3e-174 615.9 630 52.1
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 5.7e-174 615.1 618 52.3
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 2.8e-173 612.8 587 53.3
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 4.8e-173 612.1 594 54.2
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 8.2e-173 611.3 609 52.2
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 1.8e-172 610.1 603 53.2
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 2.4e-172 609.8 588 53.9
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 5.3e-172 608.6 603 52.7
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 7.0e-172 608.2 578 53.1
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 9.1e-172 607.8 604 51.5
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 1.2e-171 607.4 529 58.4
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 1.6e-171 607.1 615 53.0
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 2.6e-171 606.3 590 54.6
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 1.0e-170 604.4 610 51.5
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 2.9e-170 602.8 599 52.9
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 2.9e-170 602.8 608 52.5
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 2.9e-170 602.8 582 54.6
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 5.0e-170 602.1 602 52.5
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 6.5e-170 601.7 582 54.6
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 8.5e-170 601.3 611 52.5
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 1.9e-169 600.1 599 52.6
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 2.5e-169 599.7 619 49.4
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 4.2e-169 599.0 582 55.8
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 9.4e-169 597.8 592 52.7
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.2e-168 597.4 599 52.3
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 4.7e-168 595.5 624 51.6
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 4.7e-168 595.5 599 52.1
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 8.0e-168 594.7 608 51.8
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 1.0e-167 594.3 592 52.7
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 1.4e-167 594.0 599 52.3
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 1.8e-167 593.6 592 52.7
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 1.8e-167 593.6 615 52.5
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.3e-167 593.2 600 51.5
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 4.0e-167 592.4 608 50.0
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 4.0e-167 592.4 616 51.1
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 5.2e-167 592.0 616 52.8
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 6.7e-167 591.7 610 51.5
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 2.6e-166 589.7 616 52.1
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 7.5e-166 588.2 615 51.4
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 9.7e-166 587.8 592 52.4
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 9.7e-166 587.8 615 51.2
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 9.7e-166 587.8 615 51.1
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 1.7e-165 587.0 618 51.8
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 2.2e-165 586.6 618 49.4
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 1.1e-164 584.3 612 51.3
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 1.8e-164 583.6 580 51.2
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 1.2e-163 580.9 551 53.4
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 2.0e-163 580.1 610 51.1
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 7.7e-163 578.2 604 50.0
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 1.3e-162 577.4 604 50.0
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 2.2e-162 576.6 600 49.8
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 2.2e-162 576.6 676 47.6
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 4.2e-161 572.4 595 51.8
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 9.8e-158 561.2 562 50.4
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 3.7e-157 559.3 588 50.9
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 2.9e-154 549.7 576 49.5
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 4.7e-152 542.3 613 47.0
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 2.3e-151 540.0 583 50.4
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 1.4e-148 530.8 602 47.3
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 7.0e-148 528.5 596 47.1
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 1.6e-147 527.3 604 48.7
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 3.5e-147 526.2 586 48.8
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 5.9e-147 525.4 446 59.0
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 2.3e-146 523.5 591 49.7
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 3.1e-143 513.1 653 44.3
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 1.9e-140 503.8 595 46.7
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 1.6e-139 500.7 553 49.5
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 1.3e-138 497.7 615 46.7
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 1.7e-133 480.7 596 44.0
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 3.7e-133 479.6 569 44.6
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 4.7e-128 462.6 551 45.9
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.0e-126 457.2 601 43.4
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 1.7e-125 454.1 344 64.0
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 1.9e-124 450.7 479 48.6
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 1.9e-124 450.7 573 44.3
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 4.3e-121 439.5 444 50.2
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 1.2e-118 431.4 630 41.3
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 2.1e-112 410.6 617 37.6
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 9.6e-105 385.2 564 40.4
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 1.7e-101 374.4 580 38.3
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 1.9e-84 317.8 520 37.5
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 3.5e-83 313.5 358 44.7
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.1e-76 292.0 381 41.2
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 1.9e-76 291.2 240 61.2
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 1.3e-72 278.5 247 54.3
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 2.0e-70 271.2 395 39.0
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 4.5e-70 270.0 422 35.1
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 4.5e-62 243.4 255 49.4
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 1.3e-56 225.3 216 51.4
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.0e-46 191.4 358 32.4
arahy.Tifrunner.gnm1.ann1.3A36EA Arachis hypogaea HOM05D005553 ORTHO05D006866 7.2e-44 183.0 178 55.6
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 2.6e-33 147.9 274 35.8
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 5.4e-31 140.2 148 44.6
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 2.6e-25 121.3 225 35.1
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 4.7e-19 100.5 231 29.0
Cre01.g013400 Chlamydomonas reinhardtii HOM05D005553 ORTHO05D006866 7.5e-17 93.2 416 23.1
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 2.2e-16 91.7 224 33.5
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 3.7e-16 90.9 328 27.4
MCO09G019 Micromonas commoda HOM05D005553 ORTHO05D006866 8.3e-16 89.7 171 35.1
unitig_0.g371 Utricularia gibba HOM05D005553 ORTHO05D006866 7.8e-14 83.2 79 57.0
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 1.2e-11 75.9 97 49.5
TPR.G39542 Trifolium pratense HOM05D005553 ORTHO05D006866 1.1e-07 62.8 44 68.2


User provided reference genes

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