Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1444 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 9.3e-45 183.3 104 100.0
CDE04G1345 Ceratophyllum demersum HOM05D006768 ORTHO05D008436 5.4e-37 157.5 104 82.7
Duzib116G0009 Durio zibethinus HOM05D006768 ORTHO05D008436 1.3e-30 136.3 107 64.5
Thecc.08G120600 Theobroma cacao HOM05D006768 ORTHO05D008436 2.2e-30 135.6 107 67.3
Aqoxy6G00156 Aquilegia oxysepala HOM05D006768 ORTHO05D008436 3.8e-30 134.8 108 67.6
Gohir.A05G233000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 4.9e-30 134.4 107 66.4
Cpa.g.sc36.24 Carica papaya HOM05D006768 ORTHO05D008436 1.9e-29 132.5 107 65.4
Gohir.D02G081200 Gossypium hirsutum HOM05D006768 ORTHO05D008436 1.9e-29 132.5 107 62.6
Duzib041G0323 Durio zibethinus HOM05D006768 ORTHO05D008436 2.5e-29 132.1 107 65.4
Gorai.005G090800 Gossypium raimondii HOM05D006768 ORTHO05D008436 4.2e-29 131.3 107 61.7
COL.COLO4_38328 Corchorus olitorius HOM05D006768 ORTHO05D008436 7.1e-29 130.6 105 64.8
Gohir.D05G235400 Gossypium hirsutum HOM05D006768 ORTHO05D008436 7.1e-29 130.6 107 60.7
Gohir.A02G074000 Gossypium hirsutum HOM05D006768 ORTHO05D008436 2.1e-28 129.0 107 67.3
Potri.002G086600 Populus trichocarpa HOM05D006768 ORTHO05D008436 3.5e-28 128.3 105 61.9
MELO3C011580.2 Cucumis melo HOM05D006768 ORTHO05D008436 7.9e-28 127.1 106 61.3
Manes.18G074850 Manihot esculenta HOM05D006768 ORTHO05D008436 7.9e-28 127.1 105 59.0
ClCG08G005390 Citrullus lanatus HOM05D006768 ORTHO05D008436 1.0e-27 126.7 106 61.3
Hma1.2p1_0009F.1_g006320 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 1.0e-27 126.7 107 62.6
Manes.02G160800 Manihot esculenta HOM05D006768 ORTHO05D008436 1.0e-27 126.7 105 60.0
Solyc11g013100.2 Solanum lycopersicum HOM05D006768 ORTHO05D008436 1.0e-27 126.7 106 64.2
Sopen11g008160 Solanum pennellii HOM05D006768 ORTHO05D008436 1.0e-27 126.7 106 64.2
Potri.005G174700 Populus trichocarpa HOM05D006768 ORTHO05D008436 1.3e-27 126.3 105 61.0
CAN.G342.8 Capsicum annuum HOM05D006768 ORTHO05D008436 3.0e-27 125.2 106 63.2
Nitab4.5_0010364g0020 Nicotiana tabacum HOM05D006768 ORTHO05D008436 3.0e-27 125.2 106 64.2
Ciclev10002911m.g Citrus clementina HOM05D006768 ORTHO05D008436 3.9e-27 124.8 109 65.1
ECA234G1078 Erigeron canadensis HOM05D006768 ORTHO05D008436 6.7e-27 124.0 107 71.0
Sed0001868 Sechium edule HOM05D006768 ORTHO05D008436 6.7e-27 124.0 106 58.5
Hund27041 Selenicereus undatus HOM05D006768 ORTHO05D008436 6.7e-27 124.0 111 64.9
unitig_21.g20584 Utricularia gibba HOM05D006768 ORTHO05D008436 8.7e-27 123.6 106 65.1
PGSC0003DMG400014092 Solanum tuberosum HOM05D006768 ORTHO05D008436 1.1e-26 123.2 106 62.3
Lsat_1_v5_gn_4_25061 Lactuca sativa HOM05D006768 ORTHO05D008436 1.5e-26 122.9 107 69.2
TWI12G0503 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 1.5e-26 122.9 105 72.4
CSS0001196 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 2.5e-26 122.1 106 67.9
HanXRQChr08g0223691 Helianthus annuus HOM05D006768 ORTHO05D008436 4.3e-26 121.3 104 65.4
TWI56G0584 Tripterygium wilfordii HOM05D006768 ORTHO05D008436 4.3e-26 121.3 105 63.8
CAN.G2.37 Capsicum annuum HOM05D006768 ORTHO05D008436 5.7e-26 120.9 106 61.3
Migut.C01157 Erythranthe guttata HOM05D006768 ORTHO05D008436 9.6e-26 120.2 106 66.0
FvH4_2g26460 Fragaria vesca HOM05D006768 ORTHO05D008436 1.3e-25 119.8 106 67.9
RcHm_v2.0_Chr6g0295131 Rosa chinensis HOM05D006768 ORTHO05D008436 1.3e-25 119.8 106 67.9
TAR625G0411 Trochodendron aralioides HOM05D006768 ORTHO05D008436 1.3e-25 119.8 106 61.3
FAN24G3387 Fragaria x ananassa HOM05D006768 ORTHO05D008436 2.1e-25 119.0 106 67.9
MSTRG.25394 Avicennia marina HOM05D006768 ORTHO05D008436 2.8e-25 118.6 108 63.9
Prupe.1G502600 Prunus persica HOM05D006768 ORTHO05D008436 2.8e-25 118.6 106 67.9
ECA233G5727 Erigeron canadensis HOM05D006768 ORTHO05D008436 8.2e-25 117.1 104 65.4
EL10Ac1g00013 Beta vulgaris HOM05D006768 ORTHO05D008436 1.4e-24 116.3 108 56.5
MBI06_g02573_MAGBIO Magnolia biondii HOM05D006768 ORTHO05D008436 1.4e-24 116.3 100 71.0
PGR044G1209 Punica granatum HOM05D006768 ORTHO05D008436 1.4e-24 116.3 115 55.7
Cc10_g11060 Coffea canephora HOM05D006768 ORTHO05D008436 2.4e-24 115.5 100 66.0
CsaV3_6G003570 Cucumis sativus L. HOM05D006768 ORTHO05D008436 2.4e-24 115.5 100 59.0
HanXRQChr16g0527071 Helianthus annuus HOM05D006768 ORTHO05D008436 3.1e-24 115.2 107 64.5
SalBow7G0914 Salvia bowleyana HOM05D006768 ORTHO05D008436 3.1e-24 115.2 102 60.8
SalBow7G4665 Salvia bowleyana HOM05D006768 ORTHO05D008436 3.1e-24 115.2 102 60.8
Hma1.2p1_0073F.1_g038410 Hydrangea macrophylla HOM05D006768 ORTHO05D008436 4.1e-24 114.8 106 64.2
AUR62004718 Chenopodium quinoa HOM05D006768 ORTHO05D008436 6.9e-24 114.0 106 65.1
PSO170G4432 Papaver somniferum HOM05D006768 ORTHO05D008436 9.0e-24 113.6 106 66.0
PSO528G0064 Papaver somniferum HOM05D006768 ORTHO05D008436 9.0e-24 113.6 106 66.0
Psat2g079320 Pisum sativum HOM05D006768 ORTHO05D008436 9.0e-24 113.6 110 65.5
CANSAT25G0473 Cannabis sativa HOM05D006768 ORTHO05D008436 1.5e-23 112.8 111 65.8
Nitab4.5_0005357g0030 Nicotiana tabacum HOM05D006768 ORTHO05D008436 1.5e-23 112.8 100 62.0
CiPaw.06G026900 Carya illinoinensis HOM05D006768 ORTHO05D008436 2.6e-23 112.1 112 58.0
Gorai.009G243700 Gossypium raimondii HOM05D006768 ORTHO05D008436 2.6e-23 112.1 100 55.0
THA.LOC104817125 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 3.4e-23 111.7 108 66.7
Sp6g09840 Schrenkiella parvula HOM05D006768 ORTHO05D008436 4.5e-23 111.3 114 65.8
CSS0006116 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.8e-23 110.9 105 58.1
FAN15G1404 Fragaria x ananassa HOM05D006768 ORTHO05D008436 5.8e-23 110.9 101 67.3
arahy.Tifrunner.gnm1.ann1.BFT67J Arachis hypogaea HOM05D006768 ORTHO05D008436 1.0e-22 110.2 113 60.2
arahy.Tifrunner.gnm1.ann1.V4QE5E Arachis hypogaea HOM05D006768 ORTHO05D008436 1.0e-22 110.2 113 60.2
Carub.0006s2676 Capsella rubella HOM05D006768 ORTHO05D008436 1.0e-22 110.2 113 65.5
Phvul.008G165800 Phaseolus vulgaris HOM05D006768 ORTHO05D008436 1.0e-22 110.2 112 62.5
RhsimUnG0095400 Rhododendron simsii HOM05D006768 ORTHO05D008436 1.3e-22 109.8 99 64.6
SGA_v2.0_scaffold24G10479 Striga asiatica HOM05D006768 ORTHO05D008436 1.3e-22 109.8 108 51.9
Glyma.14G163200 Glycine max HOM05D006768 ORTHO05D008436 2.2e-22 109.0 109 66.1
Sabra02G0068000 Salix brachista HOM05D006768 ORTHO05D008436 2.2e-22 109.0 100 57.0
BraA03t12013Z Brassica rapa HOM05D006768 ORTHO05D008436 2.9e-22 108.6 113 63.7
SEGI_37020 Sequoiadendron giganteum HOM05D006768 ORTHO05D008436 2.9e-22 108.6 103 63.1
BcaC01g04777 Brassica carinata HOM05D006768 ORTHO05D008436 3.8e-22 108.2 112 66.1
BolC3t15699H Brassica oleracea HOM05D006768 ORTHO05D008436 3.8e-22 108.2 112 66.1
Glyma.13G082200 Glycine max HOM05D006768 ORTHO05D008436 3.8e-22 108.2 109 64.2
TPR.G8510 Trifolium pratense HOM05D006768 ORTHO05D008436 3.8e-22 108.2 107 59.8
HPP92_011177 Vanilla planifolia HOM05D006768 ORTHO05D008436 3.8e-22 108.2 107 62.6
AT4G08230 Arabidopsis thaliana HOM05D006768 ORTHO05D008436 5.0e-22 107.8 113 62.8
BcaB01g02871 Brassica carinata HOM05D006768 ORTHO05D008436 6.5e-22 107.5 106 58.5
Os03g0263700 Oryza sativa ssp. japonica HOM05D006768 ORTHO05D008436 6.5e-22 107.5 107 62.6
GSVIVG01008909001 Vitis vinifera HOM05D006768 ORTHO05D008436 6.5e-22 107.5 126 50.8
Zm00001eb011610 Zea mays HOM05D006768 ORTHO05D008436 6.5e-22 107.5 110 60.9
AL6G41870 Arabidopsis lyrata HOM05D006768 ORTHO05D008436 8.4e-22 107.1 112 65.2
Thhalv10029535m.g Eutrema salsugineum HOM05D006768 ORTHO05D008436 8.4e-22 107.1 108 60.2
Lalb_Chr04g0253331 Lupinus albus HOM05D006768 ORTHO05D008436 8.4e-22 107.1 112 62.5
vmacro00812 Vaccinium macrocarpon HOM05D006768 ORTHO05D008436 1.1e-21 106.7 106 54.7
Dinv27347 Davidia involucrata HOM05D006768 ORTHO05D008436 1.9e-21 105.9 110 53.6
CARHR259330 Cardamine hirsuta HOM05D006768 ORTHO05D008436 2.5e-21 105.5 110 65.5
MD08G1168400 Malus domestica HOM05D006768 ORTHO05D008436 5.5e-21 104.4 104 59.6
Zm00001eb398080 Zea mays HOM05D006768 ORTHO05D008436 9.3e-21 103.6 111 58.6
QL09p036660 Quercus lobata HOM05D006768 ORTHO05D008436 1.2e-20 103.2 110 61.8
TAR376G1039 Trochodendron aralioides HOM05D000018 ORTHO05D001920 1.2e-20 103.2 96 59.4
Lj1g0025240 Lotus japonicus HOM05D006768 ORTHO05D008436 2.1e-20 102.4 113 57.5
Atru.chr13.1393 Acer truncatum HOM05D006768 ORTHO05D008436 4.6e-20 101.3 105 58.1
A03p28000 Brassica napus HOM05D006768 ORTHO05D008436 1.0e-19 100.1 106 66.0
C03p33820 Brassica napus HOM05D006768 ORTHO05D008436 1.0e-19 100.1 106 66.0
Medtr5g059100 Medicago truncatula HOM05D006768 ORTHO05D008436 1.3e-19 99.8 108 62.0
VMungo0647G1658 Vigna mungo HOM05D006768 ORTHO05D008436 3.9e-19 98.2 105 64.8
THA.LOC104806813 Tarenaya hassleriana HOM05D006768 ORTHO05D008436 1.5e-18 96.3 108 62.0
Sabra05G0131800 Salix brachista HOM05D006768 ORTHO05D008436 1.3e-17 93.2 89 55.1
Sc23g0000800 Simmondsia chinensis HOM05D006768 ORTHO05D008436 2.2e-17 92.4 93 63.4
Haze_00489 Corylus avellana HOM05D006768 ORTHO05D008436 1.5e-15 86.3 89 53.9
Eucgr.F04346 Eucalyptus grandis HOM05D006768 ORTHO05D008436 1.5e-15 86.3 89 53.9
FAN20G0213 Fragaria x ananassa HOM05D000048 ORTHO05D004674 2.6e-15 85.5 94 60.6
FAN27G1871 Fragaria x ananassa HOM05D000048 ORTHO05D004674 1.0e-11 73.6 57 63.2
Peaxi162Scf00000g61010 Petunia axillaris HOM05D006768 ORTHO05D008436 3.0e-11 72.0 68 61.8
CSS0018251 Camellia sinensis var. sinensis HOM05D006768 ORTHO05D008436 5.1e-11 71.2 63 58.7
Ca_28007_v3 Cicer arietinum L. HOM05D006768 ORTHO05D008436 5.1e-11 71.2 80 65.0
Pp3c13_12030 Physcomitrium patens HOM05D006768 ORTHO05D008436 5.1e-11 71.2 105 54.3
Aa31LG9G14330 Aethionema arabicum HOM05D006768 ORTHO05D008436 1.1e-10 70.1 83 65.1
Mapoly0043s0020 Marchantia polymorpha HOM05D006768 ORTHO05D008436 3.3e-10 68.6 114 50.9
Nitab4.5_0001142g0120 Nicotiana tabacum HOM05D006768 ORTHO05D008436 5.7e-10 67.8 95 42.1
SMO308G0024 Selaginella moellendorffii HOM05D006768 ORTHO05D008436 7.4e-10 67.4 103 51.5
AUR62023633 Chenopodium quinoa HOM05D006768 ORTHO05D008436 1.7e-09 66.2 68 67.6
AagrBONN_evm.TU.Sc2ySwM_344.1603 Anthoceros agrestis HOM05D006768 ORTHO05D008436 2.4e-08 62.4 102 49.0


User provided reference genes

Program Settings