Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1412 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 6.9e-221 770.4 402 100.0
CDE04G1884 Ceratophyllum demersum HOM05D044379 ORTHO05D003520 6.9e-189 664.1 401 85.5
Nn2g10861 Nelumbo nucifera HOM05D003726 ORTHO05D003520 1.9e-29 134.4 440 30.9
Nn2g13146 Nelumbo nucifera HOM05D003726 ORTHO05D003520 3.7e-25 120.2 446 32.5
MBI03_g31834_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 7.8e-23 112.5 457 29.1
MBI03_g32367_MAGBIO Magnolia biondii HOM05D003726 ORTHO05D003520 1.7e-22 111.3 455 29.5
Cfa011708 Carpinus fangiana HOM05D003726 ORTHO05D003520 3.9e-22 110.2 419 28.9
TAR369G0146 Trochodendron aralioides HOM05D003726 ORTHO05D003520 5.6e-21 106.3 418 28.2
CSS0031801 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 1.7e-17 94.7 362 31.2
Potri.009G046900 Populus trichocarpa HOM05D003726 ORTHO05D003520 8.3e-17 92.4 442 27.6
Dinv28651 Davidia involucrata HOM05D003726 ORTHO05D003520 1.1e-16 92.0 430 26.7
Aqoxy4G02538 Aquilegia oxysepala HOM05D003726 ORTHO05D003520 1.9e-16 91.3 434 27.0
CSS0008670 Camellia sinensis var. sinensis HOM05D003726 ORTHO05D003520 5.4e-16 89.7 373 29.5
Hma1.2p1_0962F.1_g241820 Hydrangea macrophylla HOM05D003726 ORTHO05D003520 5.4e-16 89.7 408 26.7
QL01p038574 Quercus lobata HOM05D003726 ORTHO05D003520 5.4e-16 89.7 458 27.5
CiPaw.13G076400 Carya illinoinensis HOM05D003726 ORTHO05D003520 7.0e-16 89.4 454 24.0
TAR623G0590 Trochodendron aralioides HOM05D003726 ORTHO05D003520 1.2e-15 88.6 407 28.5
Sabra09G0034300 Salix brachista HOM05D003726 ORTHO05D003520 6.0e-15 86.3 440 26.6
Cpa.g.sc112.4 Carica papaya HOM05D003726 ORTHO05D003520 1.3e-14 85.1 440 28.2
TPR.G15189 Trifolium pratense HOM05D003726 ORTHO05D003520 2.3e-14 84.3 439 27.6
Haze_21015 Corylus avellana HOM05D003726 ORTHO05D003520 3.0e-14 84.0 406 26.8
CiPaw.14G058500 Carya illinoinensis HOM05D003726 ORTHO05D003520 3.9e-14 83.6 424 27.6
Thecc.09G299900 Theobroma cacao HOM05D003726 ORTHO05D003520 3.9e-14 83.6 434 26.5
Haze_24339 Corylus avellana HOM05D003726 ORTHO05D003520 5.0e-14 83.2 430 27.0
Medtr3g464300 Medicago truncatula HOM05D003726 ORTHO05D003520 2.5e-13 80.9 433 27.5
Cfa017195 Carpinus fangiana HOM05D003726 ORTHO05D003520 7.3e-13 79.3 392 26.0
Lalb_Chr18g0050991 Lupinus albus HOM05D003726 ORTHO05D003520 8.1e-12 75.9 436 25.0
TPR.G13333 Trifolium pratense HOM05D003726 ORTHO05D003520 1.1e-11 75.5 410 25.6
Dinv03102 Davidia involucrata HOM05D003726 ORTHO05D003520 4.0e-11 73.6 303 29.0
Ah.08g221410 Amaranthus hybridus HOM05D003726 ORTHO05D003520 6.8e-11 72.8 390 25.4
Gohir.D05G088900 Gossypium hirsutum HOM05D003726 ORTHO05D003520 1.5e-10 71.6 436 26.4
Glyma.11G174300 Glycine max HOM05D003726 ORTHO05D003520 4.4e-10 70.1 449 25.2
COL.COLO4_19173 Corchorus olitorius HOM05D003726 ORTHO05D003520 5.8e-10 69.7 429 27.3
Glyma.18G062100 Glycine max HOM05D003726 ORTHO05D003520 1.7e-09 68.2 452 25.2
Gorai.009G091100 Gossypium raimondii HOM05D003726 ORTHO05D003520 2.2e-09 67.8 438 26.3
Glyma.18G202500 Glycine max HOM05D003726 ORTHO05D003520 2.9e-09 67.4 433 26.1
Atru.chr8.2256 Acer truncatum HOM05D003726 ORTHO05D003520 3.7e-09 67.0 416 26.4
Cc01_g14320 Coffea canephora HOM05D003726 ORTHO05D003520 6.4e-09 66.2 443 27.3
QL07p035285 Quercus lobata HOM05D003726 ORTHO05D003520 6.4e-09 66.2 414 26.8
TWI31G1278 Tripterygium wilfordii HOM05D003726 ORTHO05D003520 1.1e-08 65.5 410 24.1
Duzib168G1865 Durio zibethinus HOM05D003726 ORTHO05D003520 2.4e-08 64.3 448 25.2
Gohir.A05G087800 Gossypium hirsutum HOM05D003726 ORTHO05D003520 3.2e-08 63.9 433 25.9
Prupe.6G056200 Prunus persica HOM05D003726 ORTHO05D003520 7.1e-08 62.8 405 24.4
Ciclev10011806m.g Citrus clementina HOM05D003726 ORTHO05D003520 1.2e-07 62.0 421 24.9
Ca_14944_v3 Cicer arietinum L. HOM05D003726 ORTHO05D003520 1.6e-07 61.6 384 24.5
Glyma.07G151200 Glycine max HOM05D003726 ORTHO05D003520 1.6e-07 61.6 430 26.0
Manes.02G118700 Manihot esculenta HOM05D003726 ORTHO05D003520 3.5e-07 60.5 451 23.3
Actinidia23884 Actinidia chinensis HOM05D003726 ORTHO05D003520 4.6e-07 60.1 416 26.4
EL10Ac7g16184 Beta vulgaris HOM05D003726 ORTHO05D003520 1.3e-06 58.5 444 24.1
Duzib170G0773 Durio zibethinus HOM05D003726 ORTHO05D003520 1.3e-06 58.5 358 25.4
PSO339G6116 Papaver somniferum HOM05D003726 ORTHO05D003520 1.7e-06 58.2 436 25.5
DCAR_005887 Daucus carota HOM05D003726 ORTHO05D003520 2.3e-06 57.8 435 25.1
Lj1P136T16 Lonicera japonica HOM05D003726 ORTHO05D003520 2.3e-06 57.8 324 26.9
COL.COLO4_14518 Corchorus olitorius HOM05D003726 ORTHO05D003520 3.9e-06 57.0 406 26.8
HPP92_013884 Vanilla planifolia HOM05D003726 ORTHO05D003520 3.9e-06 57.0 355 23.9
ClCG03G000690 Citrullus lanatus HOM05D003726 ORTHO05D003520 5.1e-06 56.6 310 26.8
Lj3g0010607 Lotus japonicus HOM05D003726 ORTHO05D003520 5.1e-06 56.6 433 24.2
DCAR_024016 Daucus carota HOM05D003726 ORTHO05D003520 6.6e-06 56.2 181 29.8
Rhsim13G0068300 Rhododendron simsii HOM05D003726 ORTHO05D003520 6.6e-06 56.2 357 24.9
FAN16G2238 Fragaria x ananassa HOM05D003726 ORTHO05D003520 8.6e-06 55.8 361 25.8


User provided reference genes

Program Settings