Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1405 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 5.5e-153 544.3 278 100.0
CDE02G0326 Ceratophyllum demersum HOM05D007511 ORTHO05D003753 6.5e-69 265.0 167 81.4
HPP92_004456 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.4e-15 87.8 140 37.1
CiPaw.02G046500 Carya illinoinensis HOM05D007511 ORTHO05D003753 7.0e-15 85.5 137 35.0
Nn1g08946 Nelumbo nucifera HOM05D001418 ORTHO05D003753 3.5e-14 83.2 145 31.7
TWI34G0987 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 6.0e-14 82.4 163 32.5
MBI06_g35216_MAGBIO Magnolia biondii HOM05D007511 ORTHO05D003753 3.0e-13 80.1 75 44.0
TAR625G0656 Trochodendron aralioides HOM05D001418 ORTHO05D003753 8.6e-13 78.6 129 32.6
Sc16g0009500 Simmondsia chinensis HOM05D001418 ORTHO05D003753 1.5e-12 77.8 122 33.6
TAR381G0240 Trochodendron aralioides HOM05D001418 ORTHO05D004504 1.5e-12 77.8 173 31.2
Gohir.D11G235550 Gossypium hirsutum HOM05D007511 ORTHO05D003753 4.3e-12 76.3 67 46.3
TWI60G1247 Tripterygium wilfordii HOM05D007511 ORTHO05D003753 4.3e-12 76.3 166 30.7
MD02G1239600 Malus domestica HOM05D007511 ORTHO05D003753 5.6e-12 75.9 175 29.7
PGR102G3103 Punica granatum HOM05D001418 ORTHO05D003753 5.6e-12 75.9 144 29.9
Gohir.A11G221900 Gossypium hirsutum HOM05D007511 ORTHO05D003753 7.3e-12 75.5 67 44.8
Nn1g09148 Nelumbo nucifera HOM05D007511 ORTHO05D003753 9.5e-12 75.1 71 43.7
Prupe.2G098000 Prunus persica HOM05D007511 ORTHO05D003753 9.5e-12 75.1 136 33.8
ATR1001G015 Amborella trichopoda HOM05D007511 ORTHO05D003753 1.6e-11 74.3 139 33.8
Aqoxy6G00297 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 1.6e-11 74.3 169 33.7
MD07G1077000 Malus domestica HOM05D007511 ORTHO05D003753 2.8e-11 73.6 166 30.7
Gorai.007G248300 Gossypium raimondii HOM05D007511 ORTHO05D003753 6.2e-11 72.4 127 37.0
Manes.08G158000 Manihot esculenta HOM05D007511 ORTHO05D003753 6.2e-11 72.4 137 34.3
Duzib128G1432 Durio zibethinus HOM05D007511 ORTHO05D003753 1.1e-10 71.6 143 34.3
Os11g0195700 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D003753 1.1e-10 71.6 71 46.5
CsaV3_2G011030 Cucumis sativus L. HOM05D007511 ORTHO05D003753 2.3e-10 70.5 134 35.1
Sabra19G0054300 Salix brachista HOM05D007511 ORTHO05D003753 2.3e-10 70.5 140 33.6
Cfa021634 Carpinus fangiana HOM05D001418 ORTHO05D003753 4.0e-10 69.7 67 40.3
Cfa021635 Carpinus fangiana HOM05D001418 ORTHO05D003753 4.0e-10 69.7 67 40.3
Glyma.03G092200 Glycine max HOM05D007511 ORTHO05D003753 4.0e-10 69.7 119 35.3
Glyma.16G082300 Glycine max HOM05D007511 ORTHO05D003753 4.0e-10 69.7 152 29.6
TAR629G3237 Trochodendron aralioides HOM05D007511 ORTHO05D003753 4.0e-10 69.7 124 33.1
Rhsim07G0046200 Rhododendron simsii HOM05D007511 ORTHO05D003753 5.2e-10 69.3 126 34.1
Zm00001eb112650 Zea mays HOM05D001418 ORTHO05D003753 6.8e-10 68.9 59 47.5
Haze_25311 Corylus avellana HOM05D001418 ORTHO05D003753 8.9e-10 68.6 67 38.8
Atru.chr2.1724 Acer truncatum HOM05D007511 ORTHO05D003753 1.2e-09 68.2 151 28.5
Duzib177G0499 Durio zibethinus HOM05D007511 ORTHO05D003753 1.2e-09 68.2 176 30.7
Sed0019168 Sechium edule HOM05D007511 ORTHO05D003753 1.2e-09 68.2 155 29.0
Atru.chr4.944 Acer truncatum HOM05D001418 ORTHO05D003753 1.5e-09 67.8 76 35.5
Manes.12G158100 Manihot esculenta HOM05D001418 ORTHO05D003753 1.5e-09 67.8 155 31.0
Peaxi162Scf01343g00114 Petunia axillaris HOM05D007511 ORTHO05D003753 1.5e-09 67.8 124 30.6
Rhsim01G0134700 Rhododendron simsii HOM05D000002 ORTHO05D000001 2.6e-09 67.0 125 33.6
RcHm_v2.0_Chr1g0337051 Rosa chinensis HOM05D007511 ORTHO05D003753 2.6e-09 67.0 65 47.7
Cfa000931 Carpinus fangiana HOM05D007511 ORTHO05D003753 3.4e-09 66.6 108 34.3
AUR62034848 Chenopodium quinoa HOM05D001418 ORTHO05D003753 4.4e-09 66.2 63 36.5
Lj3g0008746 Lotus japonicus HOM05D007511 ORTHO05D003753 4.4e-09 66.2 124 34.7
Sed0024034 Sechium edule HOM05D001418 ORTHO05D003753 4.4e-09 66.2 80 37.5
Zm00001eb202060 Zea mays HOM05D001418 ORTHO05D003753 4.4e-09 66.2 59 47.5
CiPaw.04G080200 Carya illinoinensis HOM05D001418 ORTHO05D003753 5.8e-09 65.9 66 37.9
Haze_18313 Corylus avellana HOM05D001418 ORTHO05D003753 7.5e-09 65.5 67 37.3
Nn3g19224 Nelumbo nucifera HOM05D007511 ORTHO05D003753 7.5e-09 65.5 139 31.7
Sabra07G0084500 Salix brachista HOM05D001418 ORTHO05D003753 7.5e-09 65.5 69 34.8
AUR62029588 Chenopodium quinoa HOM05D001418 ORTHO05D003753 9.8e-09 65.1 63 36.5
Potri.005G066500 Populus trichocarpa HOM05D001418 ORTHO05D003753 9.8e-09 65.1 69 39.1
Rhsim01G0134200 Rhododendron simsii HOM05D007511 ORTHO05D003753 9.8e-09 65.1 124 33.1
vmacro13587 Vaccinium macrocarpon HOM05D007511 ORTHO05D003753 9.8e-09 65.1 132 31.1
CANSAT01G1075 Cannabis sativa HOM05D001418 ORTHO05D003753 1.3e-08 64.7 77 40.3
FvH4_7g07110 Fragaria vesca HOM05D007511 ORTHO05D003753 1.3e-08 64.7 65 44.6
FAN06G3938 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.3e-08 64.7 65 44.6
Glyma.08G001800 Glycine max HOM05D001418 ORTHO05D003753 1.3e-08 64.7 79 35.4
Sabra05G0054800 Salix brachista HOM05D001418 ORTHO05D003753 1.3e-08 64.7 69 39.1
QL10p041669 Quercus lobata HOM05D001418 ORTHO05D003753 1.7e-08 64.3 63 38.1
QL10p041870 Quercus lobata HOM05D001418 ORTHO05D003753 1.7e-08 64.3 63 38.1
CiPaw.03G118600 Carya illinoinensis HOM05D001418 ORTHO05D003753 3.7e-08 63.2 69 34.8
Thhalv10015688m.g Eutrema salsugineum HOM05D007511 ORTHO05D003753 3.7e-08 63.2 157 29.3
PSO782G3115 Papaver somniferum HOM05D007511 ORTHO05D003753 3.7e-08 63.2 133 31.6
TAR628G0376 Trochodendron aralioides HOM05D001418 ORTHO05D003753 3.7e-08 63.2 186 24.2
Zm00001eb408450 Zea mays HOM05D001418 ORTHO05D003753 3.7e-08 63.2 141 31.2
Ciclev10033674m.g Citrus clementina HOM05D007511 ORTHO05D003753 4.9e-08 62.8 181 28.7
FAN03G1709 Fragaria x ananassa HOM05D007511 ORTHO05D003753 4.9e-08 62.8 168 30.4
Duzib264G0973 Durio zibethinus HOM05D001418 ORTHO05D003753 6.4e-08 62.4 170 27.6
Lalb_Chr13g0296701 Lupinus albus HOM05D001418 ORTHO05D003753 6.4e-08 62.4 82 32.9
Cpa.g.sc73.86 Carica papaya HOM05D007511 ORTHO05D003753 8.3e-08 62.0 138 32.6
Lalb_Chr07g0194541 Lupinus albus HOM05D007511 ORTHO05D003753 8.3e-08 62.0 120 30.8
FAN01G1810 Fragaria x ananassa HOM05D007511 ORTHO05D003753 1.1e-07 61.6 182 29.1
Psat0s409g0080 Pisum sativum HOM05D007511 ORTHO05D003753 1.1e-07 61.6 64 42.2
Potri.019G043701 Populus trichocarpa HOM05D007511 ORTHO05D003753 1.1e-07 61.6 168 28.6
PGR004G1271 Punica granatum HOM05D007511 ORTHO05D003753 1.1e-07 61.6 73 39.7
Sc06g0005400 Simmondsia chinensis HOM05D001418 ORTHO05D003753 1.1e-07 61.6 73 34.2
SGA_v2.0_scaffold5G03086 Striga asiatica HOM05D007511 ORTHO05D003753 1.1e-07 61.6 106 34.9
Thecc.05G230200 Theobroma cacao HOM05D007511 ORTHO05D003753 1.1e-07 61.6 167 29.9
HPP92_025164 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.1e-07 61.6 66 37.9
HPP92_025177 Vanilla planifolia HOM05D001418 ORTHO05D003753 1.1e-07 61.6 66 37.9
CiPaw.03G118500 Carya illinoinensis HOM05D001418 ORTHO05D003753 1.4e-07 61.2 81 33.3
FAN10G2279 Fragaria x ananassa HOM05D001937 ORTHO05D007024 1.4e-07 61.2 168 29.8
Os12g0182000 Oryza sativa ssp. japonica HOM05D001418 ORTHO05D003753 1.4e-07 61.2 57 47.4
VMungo0251G3540 Vigna mungo HOM05D001418 ORTHO05D003753 1.4e-07 61.2 81 32.1
Ah.02g114820 Amaranthus hybridus HOM05D001418 ORTHO05D003753 1.9e-07 60.8 157 25.5
Ah.06g190930 Amaranthus hybridus HOM05D001418 ORTHO05D003753 1.9e-07 60.8 76 30.3
Nitab4.5_0004800g0110 Nicotiana tabacum HOM05D000001 ORTHO05D011953 2.4e-07 60.5 118 30.5
Phvul.002G274200 Phaseolus vulgaris HOM05D001418 ORTHO05D003753 2.4e-07 60.5 68 36.8
CANSAT35G2046 Cannabis sativa HOM05D007511 ORTHO05D003753 3.2e-07 60.1 66 42.4
ClCG02G000350 Citrullus lanatus HOM05D001418 ORTHO05D003753 3.2e-07 60.1 67 35.8
Hma1.2p1_0915F.1_g236420 Hydrangea macrophylla HOM05D007511 ORTHO05D003753 3.2e-07 60.1 130 31.5
Lj4g0007966 Lotus japonicus HOM05D001418 ORTHO05D003753 3.2e-07 60.1 70 35.7
Lalb_Chr07g0184281 Lupinus albus HOM05D001418 ORTHO05D003753 3.2e-07 60.1 66 33.3
Lalb_Chr12g0203061 Lupinus albus HOM05D001418 ORTHO05D003753 3.2e-07 60.1 66 34.8
AUR62000505 Chenopodium quinoa HOM05D001418 ORTHO05D003753 4.1e-07 59.7 99 30.3
MELO3C023225.2 Cucumis melo HOM05D001418 ORTHO05D003753 4.1e-07 59.7 67 35.8
Gohir.D09G004300 Gossypium hirsutum HOM05D001418 ORTHO05D003753 4.1e-07 59.7 84 36.9
Gorai.006G005900 Gossypium raimondii HOM05D001418 ORTHO05D003753 4.1e-07 59.7 84 36.9
Oeu024951.1 Olea europaea HOM05D007511 ORTHO05D003753 4.1e-07 59.7 133 33.1
Psat4g207240 Pisum sativum HOM05D007511 ORTHO05D003753 4.1e-07 59.7 154 31.2
Aqoxy5G00551 Aquilegia oxysepala HOM05D007511 ORTHO05D003753 5.4e-07 59.3 202 29.2
Oeu032775.1 Olea europaea HOM05D007511 ORTHO05D003753 5.4e-07 59.3 131 33.6
PGSC0003DMG400043768 Solanum tuberosum HOM05D007511 ORTHO05D003753 5.4e-07 59.3 108 35.2
CSS0038510 Camellia sinensis var. sinensis HOM05D007511 ORTHO05D003753 7.1e-07 58.9 68 38.2
CsaV3_2G019490 Cucumis sativus L. HOM05D001418 ORTHO05D003753 7.1e-07 58.9 67 34.3
Gohir.A09G005000 Gossypium hirsutum HOM05D001418 ORTHO05D003753 7.1e-07 58.9 84 35.7
A03p08430 Brassica napus HOM05D007511 ORTHO05D003753 9.2e-07 58.5 120 31.7
BraA03t10166Z Brassica rapa HOM05D007511 ORTHO05D003753 9.2e-07 58.5 120 31.7
Eucgr.H05149 Eucalyptus grandis HOM05D001418 ORTHO05D003753 9.2e-07 58.5 146 26.0
HanXRQChr04g0119711 Helianthus annuus HOM05D007511 ORTHO05D003753 9.2e-07 58.5 67 35.8
AL6G28680 Arabidopsis lyrata HOM05D007511 ORTHO05D003753 1.2e-06 58.2 146 28.1
BcaB01g05209 Brassica carinata HOM05D007511 ORTHO05D003753 1.2e-06 58.2 120 31.7
C03p09830 Brassica napus HOM05D007511 ORTHO05D003753 1.2e-06 58.2 120 31.7
Migut.B01440 Erythranthe guttata HOM05D007511 ORTHO05D003753 1.2e-06 58.2 68 39.7
Medtr8g011160 Medicago truncatula HOM05D007511 ORTHO05D003753 1.2e-06 58.2 64 40.6
Psat7g044600 Pisum sativum HOM05D001418 ORTHO05D003753 1.2e-06 58.2 66 34.8
Sopen01g032800 Solanum pennellii HOM05D007511 ORTHO05D003753 1.2e-06 58.2 94 36.2
C02p09200 Brassica napus HOM05D007511 ORTHO05D003753 1.6e-06 57.8 169 29.0
AUR62006850 Chenopodium quinoa HOM05D001418 ORTHO05D003753 1.6e-06 57.8 127 28.3
TPR.G37392 Trifolium pratense HOM05D001418 ORTHO05D003753 1.6e-06 57.8 68 33.8
AT5G17590 Arabidopsis thaliana HOM05D007511 ORTHO05D003753 2.1e-06 57.4 132 28.8
Medtr8g094040 Medicago truncatula HOM05D001418 ORTHO05D003753 2.1e-06 57.4 79 32.9
Carub.0006s1583 Capsella rubella HOM05D007511 ORTHO05D003753 2.7e-06 57.0 132 27.3
Duzib187G1961 Durio zibethinus HOM05D001418 ORTHO05D003753 2.7e-06 57.0 63 36.5
Eucgr.D00980 Eucalyptus grandis HOM05D007511 ORTHO05D003753 2.7e-06 57.0 179 28.5
TWI79G1507 Tripterygium wilfordii HOM05D001418 ORTHO05D003753 2.7e-06 57.0 120 23.3
Gohir.D10G108200 Gossypium hirsutum HOM05D001418 ORTHO05D003753 3.5e-06 56.6 69 34.8
Ca_23172_v3 Cicer arietinum L. HOM05D007511 ORTHO05D003753 4.6e-06 56.2 130 28.5
Gorai.011G118700 Gossypium raimondii HOM05D001418 ORTHO05D003753 4.6e-06 56.2 69 34.8
arahy.Tifrunner.gnm1.ann1.QAD3X4 Arachis hypogaea HOM05D001418 ORTHO05D003753 6.0e-06 55.8 68 38.2
A02p04350 Brassica napus HOM05D007511 ORTHO05D003753 6.0e-06 55.8 169 28.4
BraA02t05399Z Brassica rapa HOM05D007511 ORTHO05D003753 6.0e-06 55.8 169 28.4
QL10p041674 Quercus lobata HOM05D001418 ORTHO05D003753 6.0e-06 55.8 58 34.5
QL10p041864 Quercus lobata HOM05D001418 ORTHO05D003753 6.0e-06 55.8 58 34.5
Thecc.01G136200 Theobroma cacao HOM05D001418 ORTHO05D003753 6.0e-06 55.8 168 26.2
Glyma.04G210600 Glycine max HOM05D001418 ORTHO05D003753 7.8e-06 55.5 63 33.3


User provided reference genes

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