Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1395 Ceratophyllum demersum HOM05D001901 ORTHO05D001850 1.5e-76 289.3 133 100.0
CDE06G1341 Ceratophyllum demersum HOM05D001901 ORTHO05D001850 4.2e-66 254.6 135 87.4
MD07G1065700 Malus domestica HOM05D001901 ORTHO05D001850 8.5e-43 177.2 139 64.0
CANSAT56G1274 Cannabis sativa HOM05D001901 ORTHO05D001850 7.2e-42 174.1 141 63.1
Manes.10G058300 Manihot esculenta HOM05D001901 ORTHO05D001850 2.1e-41 172.6 139 61.9
PSO339G5608 Papaver somniferum HOM05D001901 ORTHO05D001850 1.0e-40 170.2 140 59.3
Manes.07G087800 Manihot esculenta HOM05D001901 ORTHO05D001850 1.4e-40 169.9 139 61.9
PSO384G4327 Papaver somniferum HOM05D001901 ORTHO05D001850 3.9e-40 168.3 140 58.6
Glyma.10G203800 Glycine max HOM05D001901 ORTHO05D001850 5.2e-40 167.9 140 61.4
TWI15G0670 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 6.7e-40 167.5 139 59.7
TAR633G0842 Trochodendron aralioides HOM05D001901 ORTHO05D001850 2.6e-39 165.6 140 61.4
TWI63G1270 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 3.3e-39 165.2 140 58.6
TWI38G1487 Tripterygium wilfordii HOM05D001901 ORTHO05D001850 1.3e-38 163.3 138 58.7
Cc02_g09820 Coffea canephora HOM05D001901 ORTHO05D001850 2.2e-38 162.5 140 58.6
RcHm_v2.0_Chr1g0332761 Rosa chinensis HOM05D001901 ORTHO05D001850 2.2e-38 162.5 140 60.0
CiPaw.13G038500 Carya illinoinensis HOM05D001901 ORTHO05D001850 2.8e-38 162.2 144 59.7
GSVIVG01011273001 Vitis vinifera HOM05D001901 ORTHO05D001850 3.7e-38 161.8 140 58.6
Atru.chr12.1005 Acer truncatum HOM05D001901 ORTHO05D001850 4.8e-38 161.4 141 61.0
Prupe.2G079700 Prunus persica HOM05D001901 ORTHO05D001850 6.3e-38 161.0 140 59.3
TAR636G1819 Trochodendron aralioides HOM05D001901 ORTHO05D001850 1.8e-37 159.5 139 57.6
CANSAT56G1512 Cannabis sativa HOM05D001901 ORTHO05D001850 3.1e-37 158.7 139 59.7
Thecc.10G107100 Theobroma cacao HOM05D001901 ORTHO05D001850 3.1e-37 158.7 140 57.9
Potri.008G021900 Populus trichocarpa HOM05D001901 ORTHO05D001850 4.1e-37 158.3 145 57.9
CSS0016854 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 7.0e-37 157.5 142 59.2
Cfa011264 Carpinus fangiana HOM05D001901 ORTHO05D001850 1.2e-36 156.8 140 57.9
Aqoxy2G01221 Aquilegia oxysepala HOM05D001901 ORTHO05D001850 1.6e-36 156.4 140 57.1
AUR62037672 Chenopodium quinoa HOM05D001901 ORTHO05D001850 2.0e-36 156.0 140 57.9
Eucgr.G02696 Eucalyptus grandis HOM05D001901 ORTHO05D001850 2.0e-36 156.0 139 59.0
Lj5g0019607 Lotus japonicus HOM05D001901 ORTHO05D001850 2.6e-36 155.6 139 55.4
CSS0000065 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 5.9e-36 154.5 140 56.4
Medtr1g092900 Medicago truncatula HOM05D001901 ORTHO05D001850 5.9e-36 154.5 148 54.1
Glyma.20G186800 Glycine max HOM05D001901 ORTHO05D001850 1.0e-35 153.7 139 56.8
MD02G1255700 Malus domestica HOM05D001901 ORTHO05D001850 1.3e-35 153.3 140 57.9
Cpa.g.sc183.7 Carica papaya HOM05D001901 ORTHO05D001850 1.7e-35 152.9 140 55.7
TPR.G18688 Trifolium pratense HOM05D001901 ORTHO05D001850 1.7e-35 152.9 148 54.1
Sc09g0005470 Simmondsia chinensis HOM05D001901 ORTHO05D001850 2.2e-35 152.5 139 56.1
DCAR_006343 Daucus carota HOM05D001901 ORTHO05D001850 2.9e-35 152.1 141 58.2
Duzib128G0410 Durio zibethinus HOM05D001901 ORTHO05D001850 2.9e-35 152.1 140 56.4
Hund22299 Selenicereus undatus HOM05D001901 ORTHO05D001850 3.8e-35 151.8 138 57.2
ATR0820G142 Amborella trichopoda HOM05D001901 ORTHO05D001850 5.0e-35 151.4 128 60.2
Lalb_Chr06g0170211 Lupinus albus HOM05D001901 ORTHO05D001850 6.5e-35 151.0 140 57.1
Migut.F00906 Erythranthe guttata HOM05D001901 ORTHO05D001850 8.5e-35 150.6 140 55.0
THA.LOC104825357 Tarenaya hassleriana HOM05D001901 ORTHO05D001850 1.1e-34 150.2 140 54.3
VMungo0720G1116 Vigna mungo HOM05D001901 ORTHO05D001850 1.1e-34 150.2 138 56.5
Ah.06g187720 Amaranthus hybridus HOM05D001901 ORTHO05D001850 1.9e-34 149.4 139 52.5
MSTRG.27533 Avicennia marina HOM05D001901 ORTHO05D001850 1.9e-34 149.4 139 58.3
arahy.Tifrunner.gnm1.ann1.AMJ10Y Arachis hypogaea HOM05D001901 ORTHO05D001850 3.2e-34 148.7 138 55.8
Ca_10509_v3 Cicer arietinum L. HOM05D001901 ORTHO05D001850 7.2e-34 147.5 132 55.3
FvH4_7g05730 Fragaria vesca HOM05D001901 ORTHO05D001850 7.2e-34 147.5 140 56.4
FAN01G1784 Fragaria x ananassa HOM05D001901 ORTHO05D001850 7.2e-34 147.5 140 56.4
Actinidia06700 Actinidia chinensis HOM05D001901 ORTHO05D001850 9.4e-34 147.1 140 55.0
Ciclev10031477m.g Citrus clementina HOM05D001901 ORTHO05D001850 9.4e-34 147.1 139 56.8
Peaxi162Scf00173g00611 Petunia axillaris HOM05D001901 ORTHO05D001850 9.4e-34 147.1 140 58.6
ECA238G2260 Erigeron canadensis HOM05D001901 ORTHO05D001850 1.2e-33 146.7 139 57.6
Lj2C31G15 Lonicera japonica HOM05D001901 ORTHO05D001850 2.1e-33 146.0 128 57.8
Psat6g177680 Pisum sativum HOM05D001901 ORTHO05D001850 2.1e-33 146.0 149 52.3
MSTRG.9088 Avicennia marina HOM05D001901 ORTHO05D001850 2.7e-33 145.6 137 52.6
Phvul.007G103200 Phaseolus vulgaris HOM05D001901 ORTHO05D001850 4.7e-33 144.8 139 55.4
Solyc11g007110.2 Solanum lycopersicum HOM05D001901 ORTHO05D001850 6.1e-33 144.4 141 56.7
CAN.G730.31 Capsicum annuum HOM05D001901 ORTHO05D001850 1.0e-32 143.7 141 56.7
Sopen11g003030 Solanum pennellii HOM05D001901 ORTHO05D001850 1.0e-32 143.7 141 56.7
THA.LOC104801230 Tarenaya hassleriana HOM05D001901 ORTHO05D001850 1.0e-32 143.7 140 50.0
EL10Ac4g08640 Beta vulgaris HOM05D001901 ORTHO05D001850 1.4e-32 143.3 114 62.3
Nn2g14117 Nelumbo nucifera HOM05D001901 ORTHO05D001850 1.4e-32 143.3 124 59.7
Potri.010G237500 Populus trichocarpa HOM05D001901 ORTHO05D001850 1.4e-32 143.3 140 54.3
QL04p044842 Quercus lobata HOM05D001901 ORTHO05D001850 1.8e-32 142.9 126 60.3
arahy.Tifrunner.gnm1.ann1.1Z1ZPG Arachis hypogaea HOM05D001901 ORTHO05D001850 5.2e-32 141.4 146 52.7
MELO3C012355.2 Cucumis melo HOM05D001901 ORTHO05D001850 5.2e-32 141.4 139 51.8
HanXRQChr11g0342221 Helianthus annuus HOM05D001901 ORTHO05D001850 5.2e-32 141.4 144 54.2
PGSC0003DMG400019487 Solanum tuberosum HOM05D001901 ORTHO05D001850 5.2e-32 141.4 141 57.4
Gohir.A10G198000 Gossypium hirsutum HOM05D001901 ORTHO05D001850 6.8e-32 141.0 140 53.6
Gohir.D10G205100 Gossypium hirsutum HOM05D001901 ORTHO05D001850 6.8e-32 141.0 140 53.6
Gorai.011G230000 Gossypium raimondii HOM05D001901 ORTHO05D001850 6.8e-32 141.0 140 53.6
TAR369G0256 Trochodendron aralioides HOM05D001901 ORTHO05D001850 8.8e-32 140.6 125 60.8
Lalb_Chr21g0313311 Lupinus albus HOM05D001901 ORTHO05D001850 1.2e-31 140.2 150 51.3
Duzib106G0363 Durio zibethinus HOM05D001901 ORTHO05D001850 1.5e-31 139.8 139 54.0
unitig_46.g18635 Utricularia gibba HOM05D001901 ORTHO05D001850 1.5e-31 139.8 143 52.4
FAN10G0070 Fragaria x ananassa HOM05D001901 ORTHO05D001850 2.6e-31 139.0 168 48.8
FAN10G0628 Fragaria x ananassa HOM05D001901 ORTHO05D001850 2.6e-31 139.0 168 48.8
CsaV3_5G035530 Cucumis sativus L. HOM05D001901 ORTHO05D001850 4.4e-31 138.3 139 51.1
FAN01G0582 Fragaria x ananassa HOM05D001901 ORTHO05D001850 5.7e-31 137.9 140 53.6
Lalb_Chr02g0151711 Lupinus albus HOM05D001901 ORTHO05D001850 7.5e-31 137.5 140 52.9
AUR62034502 Chenopodium quinoa HOM05D001901 ORTHO05D001850 1.3e-30 136.7 127 55.9
Rhsim09G0142800 Rhododendron simsii HOM05D001901 ORTHO05D001850 1.3e-30 136.7 139 52.5
FAN03G1021 Fragaria x ananassa HOM05D001901 ORTHO05D001850 3.7e-30 135.2 168 47.6
Sed0011962 Sechium edule HOM05D001901 ORTHO05D001850 1.1e-29 133.7 139 49.6
Lj5g0016568 Lotus japonicus HOM05D001901 ORTHO05D001850 1.4e-29 133.3 138 50.0
Rhsim03G0099800 Rhododendron simsii HOM05D001901 ORTHO05D001850 3.1e-29 132.1 125 57.6
vmacro10299 Vaccinium macrocarpon HOM05D001901 ORTHO05D001850 4.1e-29 131.7 139 50.4
Nitab4.5_0003774g0060 Nicotiana tabacum HOM05D001901 ORTHO05D001850 5.3e-29 131.3 126 57.9
SEGI_39051 Sequoiadendron giganteum HOM05D001901 ORTHO05D001850 5.3e-29 131.3 138 53.6
Sabra10G0185900 Salix brachista HOM05D001901 ORTHO05D001850 7.0e-29 131.0 135 52.6
HanXRQChr07g0194241 Helianthus annuus HOM05D001901 ORTHO05D001850 9.1e-29 130.6 140 55.7
Nitab4.5_0001437g0130 Nicotiana tabacum HOM05D001901 ORTHO05D001850 1.6e-28 129.8 124 58.9
Os09g0568000 Oryza sativa ssp. japonica HOM05D001901 ORTHO05D001850 1.6e-28 129.8 140 49.3
Haze_02514 Corylus avellana HOM05D001901 ORTHO05D001850 2.0e-28 129.4 123 54.5
CiPaw.14G032700 Carya illinoinensis HOM05D001901 ORTHO05D001850 1.3e-27 126.7 122 55.7
FAN06G0939 Fragaria x ananassa HOM05D001901 ORTHO05D001850 1.3e-27 126.7 123 56.1
HanXRQChr11g0321281 Helianthus annuus HOM05D001901 ORTHO05D001850 1.3e-27 126.7 140 52.1
Sabra08G0014800 Salix brachista HOM05D001901 ORTHO05D001850 2.9e-27 125.6 133 53.4
Lj3C928T15 Lonicera japonica HOM05D001901 ORTHO05D001850 1.5e-26 123.2 127 54.3
Zm00001eb095980 Zea mays HOM05D001901 ORTHO05D001850 1.9e-26 122.9 137 48.9
Psat6g177840 Pisum sativum HOM05D001901 ORTHO05D001850 2.5e-26 122.5 140 50.0
Medtr1g092910 Medicago truncatula HOM05D001901 ORTHO05D001850 3.2e-26 122.1 140 50.7
HanXRQChr05g0146921 Helianthus annuus HOM05D001901 ORTHO05D001850 5.5e-26 121.3 142 50.7
ClCG05G021740 Citrullus lanatus HOM05D001901 ORTHO05D001850 7.2e-26 120.9 121 51.2
SGA_v2.0_scaffold13G06486 Striga asiatica HOM05D001901 ORTHO05D004049 7.2e-26 120.9 166 42.2
Nn6g34943 Nelumbo nucifera HOM05D001901 ORTHO05D001850 1.0e-24 117.1 92 60.9
SalBow6G1394 Salvia bowleyana HOM05D001901 ORTHO05D001850 3.0e-24 115.5 123 52.8
Ca_10510_v3 Cicer arietinum L. HOM05D001901 ORTHO05D001850 8.8e-24 114.0 137 48.9
Lsat_1_v5_gn_2_104661 Lactuca sativa HOM05D001901 ORTHO05D001850 4.4e-23 111.7 125 52.8
Oeu025593.4 Olea europaea HOM05D001901 ORTHO05D001850 4.4e-23 111.7 86 61.6
PGR044G0874 Punica granatum HOM05D001901 ORTHO05D001850 4.4e-23 111.7 137 46.7
Oeu036840.1 Olea europaea HOM05D003607 ORTHO05D004049 9.8e-23 110.5 91 58.2
TPR.G18683 Trifolium pratense HOM05D001901 ORTHO05D001850 2.8e-22 109.0 137 46.7
Zm00001eb308340 Zea mays HOM05D001901 ORTHO05D001850 3.7e-22 108.6 123 49.6
SEGI_01706 Sequoiadendron giganteum HOM05D001901 ORTHO05D001850 3.1e-21 105.5 140 45.7
Dinv09597 Davidia involucrata HOM05D001901 ORTHO05D001850 4.1e-21 105.1 106 52.8
HPP92_005466 Vanilla planifolia HOM05D001901 ORTHO05D001850 2.7e-20 102.4 106 50.9
CSS0034138 Camellia sinensis var. sinensis HOM05D001901 ORTHO05D001850 5.0e-19 98.2 115 46.1
Lsat_1_v5_gn_0_7560 Lactuca sativa HOM05D001901 ORTHO05D001850 1.1e-18 97.1 132 45.5
SHI21302 Sapria himalayana HOM05D001901 ORTHO05D001850 1.9e-18 96.3 114 46.5
SGA_v2.0_scaffold62G21344 Striga asiatica HOM05D001901 ORTHO05D001850 1.9e-18 96.3 80 58.8
vmacro10301 Vaccinium macrocarpon HOM05D001901 ORTHO05D001850 7.2e-18 94.4 86 53.5
AagrBONN_evm.TU.Sc2ySwM_344.5025 Anthoceros agrestis HOM05D001901 ORTHO05D001850 2.1e-17 92.8 129 41.9
Pp3c15_1650 Physcomitrium patens HOM05D001901 ORTHO05D001850 2.1e-17 92.8 129 41.9
Pp3c9_1350 Physcomitrium patens HOM05D001901 ORTHO05D001850 1.8e-16 89.7 130 42.3
Mapoly0029s0081 Marchantia polymorpha HOM05D001901 ORTHO05D001850 3.4e-15 85.5 142 40.8
Oeu026576.1 Olea europaea HOM05D001901 ORTHO05D001850 3.7e-14 82.0 71 62.0
Dinv11851 Davidia involucrata HOM05D001901 ORTHO05D001850 1.4e-13 80.1 54 70.4
FAN06G4547 Fragaria x ananassa HOM05D001901 ORTHO05D001850 7.0e-13 77.8 63 60.3
CsaV3_7G016140 Cucumis sativus L. HOM05D001901 ORTHO05D001850 7.8e-12 74.3 59 57.6
unitig_37.g12345 Utricularia gibba HOM05D001901 ORTHO05D001850 7.8e-12 74.3 40 77.5
CBR_g20977 Chara braunii HOM05D001901 ORTHO05D001850 3.3e-10 68.9 92 42.4


User provided reference genes

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