Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1389 Ceratophyllum demersum HOM05D006639 ORTHO05D008339 8.9e-73 276.9 151 100.0
Aqoxy4G02766 Aquilegia oxysepala HOM05D006639 ORTHO05D008339 2.3e-36 156.0 151 57.6
PGR119G2179 Punica granatum HOM05D006639 ORTHO05D008339 3.9e-36 155.2 116 69.0
CSS0034800 Camellia sinensis var. sinensis HOM05D006639 ORTHO05D008339 8.7e-36 154.1 139 63.3
MBI17_g08336_MAGBIO Magnolia biondii HOM05D006639 ORTHO05D008339 1.9e-35 152.9 151 60.9
CANSAT56G0593 Cannabis sativa HOM05D006639 ORTHO05D008339 2.5e-35 152.5 145 62.1
CANSAT56G1587 Cannabis sativa HOM05D006639 ORTHO05D008339 2.5e-35 152.5 145 62.1
Nn6g34885 Nelumbo nucifera HOM05D006639 ORTHO05D008339 3.3e-35 152.1 149 59.7
TAR636G3315 Trochodendron aralioides HOM05D006639 ORTHO05D008339 5.7e-35 151.4 150 59.3
Manes.11G162100 Manihot esculenta HOM05D006639 ORTHO05D008339 5.3e-33 144.8 101 69.3
Ciclev10029525m.g Citrus clementina HOM05D006639 ORTHO05D008339 1.5e-32 143.3 136 55.9
TPR.G17231 Trifolium pratense HOM05D006639 ORTHO05D008339 2.0e-32 142.9 130 61.5
RcHm_v2.0_Chr5g0044741 Rosa chinensis HOM05D006639 ORTHO05D008339 2.6e-32 142.5 104 70.2
Hund18759 Selenicereus undatus HOM05D006639 ORTHO05D008339 2.6e-32 142.5 134 62.7
FAN21G1301 Fragaria x ananassa HOM05D006639 ORTHO05D008339 4.5e-32 141.7 105 68.6
Rhsim13G0112100 Rhododendron simsii HOM05D006639 ORTHO05D008339 4.5e-32 141.7 149 59.1
Thecc.09G282700 Theobroma cacao HOM05D006639 ORTHO05D008339 5.9e-32 141.4 123 63.4
TWI31G0153 Tripterygium wilfordii HOM05D006639 ORTHO05D008339 5.9e-32 141.4 117 66.7
CsaV3_6G038390 Cucumis sativus L. HOM05D006639 ORTHO05D008339 7.7e-32 141.0 153 55.6
Os09g0568200 Oryza sativa ssp. japonica HOM05D006639 ORTHO05D008339 7.7e-32 141.0 141 56.7
PSO339G4282 Papaver somniferum HOM05D006639 ORTHO05D008339 7.7e-32 141.0 134 60.4
Ca_19409_v3 Cicer arietinum L. HOM05D006639 ORTHO05D008339 1.0e-31 140.6 130 60.0
Glyma.11G183100 Glycine max HOM05D006639 ORTHO05D008339 1.0e-31 140.6 120 64.2
Potri.009G163500 Populus trichocarpa HOM05D006639 ORTHO05D008339 1.0e-31 140.6 117 65.0
GSVIVG01036120001 Vitis vinifera HOM05D006639 ORTHO05D008339 1.0e-31 140.6 146 52.7
HanXRQChr14g0438101 Helianthus annuus HOM05D006639 ORTHO05D008339 1.7e-31 139.8 103 68.9
PSO384G2857 Papaver somniferum HOM05D006639 ORTHO05D008339 1.7e-31 139.8 121 63.6
arahy.Tifrunner.gnm1.ann1.I7PXCJ Arachis hypogaea HOM05D006639 ORTHO05D008339 2.2e-31 139.4 149 57.0
FvH4_3g24950 Fragaria vesca HOM05D006639 ORTHO05D008339 2.2e-31 139.4 105 67.6
Lalb_Chr19g0136451 Lupinus albus HOM05D006639 ORTHO05D008339 2.2e-31 139.4 128 57.8
Gohir.A05G080500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 2.9e-31 139.0 101 68.3
Medtr4g052950 Medicago truncatula HOM05D006639 ORTHO05D008339 2.9e-31 139.0 139 58.3
Psat7g187880 Pisum sativum HOM05D006639 ORTHO05D008339 2.9e-31 139.0 128 58.6
Duzib168G1184 Durio zibethinus HOM05D006639 ORTHO05D008339 3.8e-31 138.7 101 67.3
FAN25G3607 Fragaria x ananassa HOM05D006639 ORTHO05D008339 3.8e-31 138.7 118 64.4
Oeu022427.1 Olea europaea HOM05D006639 ORTHO05D008339 5.0e-31 138.3 144 55.6
FAN16G2085 Fragaria x ananassa HOM05D006639 ORTHO05D008339 6.5e-31 137.9 105 66.7
Ah.15g095860 Amaranthus hybridus HOM05D006639 ORTHO05D008339 8.5e-31 137.5 121 62.8
Lsat_1_v5_gn_2_59441 Lactuca sativa HOM05D006639 ORTHO05D008339 8.5e-31 137.5 105 65.7
Aa31LG5G8810 Aethionema arabicum HOM05D006639 ORTHO05D008339 1.1e-30 137.1 141 56.0
MELO3C014503.2 Cucumis melo HOM05D006639 ORTHO05D008339 1.4e-30 136.7 148 56.1
Lj3g0014332 Lotus japonicus HOM05D006639 ORTHO05D008339 2.5e-30 136.0 115 62.6
arahy.Tifrunner.gnm1.ann1.UG6V14 Arachis hypogaea HOM05D006639 ORTHO05D008339 3.2e-30 135.6 151 55.6
Gorai.009G085200 Gossypium raimondii HOM05D006639 ORTHO05D008339 3.2e-30 135.6 139 54.7
VMungo1127G0544 Vigna mungo HOM05D006639 ORTHO05D008339 3.2e-30 135.6 136 54.4
AT2G27470 Arabidopsis thaliana HOM05D006639 ORTHO05D008339 4.2e-30 135.2 100 64.0
Sabra09G0127600 Salix brachista HOM05D006639 ORTHO05D008339 4.2e-30 135.2 117 61.5
Eucgr.J00499 Eucalyptus grandis HOM05D006639 ORTHO05D008339 5.5e-30 134.8 143 53.1
Phvul.011G094600 Phaseolus vulgaris HOM05D006639 ORTHO05D008339 5.5e-30 134.8 117 59.8
vmacro03320 Vaccinium macrocarpon HOM05D006639 ORTHO05D008339 5.5e-30 134.8 114 64.9
Zm00001eb308280 Zea mays HOM05D006639 ORTHO05D008339 5.5e-30 134.8 135 54.1
Nitab4.5_0000755g0110 Nicotiana tabacum HOM05D006639 ORTHO05D008339 7.2e-30 134.4 132 57.6
Sp4g10260 Schrenkiella parvula HOM05D006639 ORTHO05D008339 7.2e-30 134.4 98 65.3
Gohir.D05G083500 Gossypium hirsutum HOM05D006639 ORTHO05D008339 9.4e-30 134.0 139 54.7
AL4G21460 Arabidopsis lyrata HOM05D006639 ORTHO05D008339 1.2e-29 133.7 100 63.0
BcaB02g10091 Brassica carinata HOM05D006639 ORTHO05D008339 1.2e-29 133.7 98 65.3
ClCG02G022260 Citrullus lanatus HOM05D006639 ORTHO05D008339 1.2e-29 133.7 151 55.0
Cc01_g09080 Coffea canephora HOM05D006639 ORTHO05D008339 1.2e-29 133.7 142 57.0
ECA238G3612 Erigeron canadensis HOM05D006639 ORTHO05D008339 1.2e-29 133.7 101 66.3
ATR0776G083 Amborella trichopoda HOM05D006639 ORTHO05D008339 1.6e-29 133.3 121 60.3
CiPaw.14G099800 Carya illinoinensis HOM05D006639 ORTHO05D008339 1.6e-29 133.3 91 72.5
Carub.0004s0810 Capsella rubella HOM05D006639 ORTHO05D008339 2.1e-29 132.9 100 63.0
Haze_23370 Corylus avellana HOM05D006639 ORTHO05D008339 2.1e-29 132.9 90 72.2
Peaxi162Scf00040g00018 Petunia axillaris HOM05D006639 ORTHO05D008339 2.1e-29 132.9 149 55.7
Glyma.12G089400 Glycine max HOM05D006639 ORTHO05D008339 3.6e-29 132.1 122 56.6
Sopen11g027190 Solanum pennellii HOM05D006639 ORTHO05D008339 3.6e-29 132.1 154 52.6
Sc12g0004540 Simmondsia chinensis HOM05D006639 ORTHO05D008339 6.1e-29 131.3 147 55.1
EL10Ac7g15828 Beta vulgaris HOM05D006639 ORTHO05D008339 1.0e-28 130.6 146 55.5
Nitab4.5_0010969g0010 Nicotiana tabacum HOM05D006639 ORTHO05D008339 1.0e-28 130.6 137 56.2
Sed0014981 Sechium edule HOM05D006639 ORTHO05D008339 1.0e-28 130.6 92 67.4
THA.LOC104826426 Tarenaya hassleriana HOM05D006639 ORTHO05D008339 1.0e-28 130.6 158 48.1
CARHR120120 Cardamine hirsuta HOM05D006639 ORTHO05D008339 1.4e-28 130.2 100 62.0
MD11G1164600 Malus domestica HOM05D006639 ORTHO05D008339 2.3e-28 129.4 103 67.0
Solyc11g068480.2 Solanum lycopersicum HOM05D006639 ORTHO05D008339 2.3e-28 129.4 147 53.7
HPP92_003216 Vanilla planifolia HOM05D006639 ORTHO05D008339 2.3e-28 129.4 157 48.4
QL01p012190 Quercus lobata HOM05D006639 ORTHO05D008339 3.0e-28 129.0 138 55.8
unitig_37.g12892 Utricularia gibba HOM05D006639 ORTHO05D008339 5.1e-28 128.3 142 53.5
A07p18230 Brassica napus HOM05D006639 ORTHO05D008339 1.1e-27 127.1 148 48.0
CAN.G1524.3 Capsicum annuum HOM05D006639 ORTHO05D008339 1.1e-27 127.1 156 53.8
BraA07t29539Z Brassica rapa HOM05D006639 ORTHO05D008339 1.5e-27 126.7 149 47.0
BcaC02g10878 Brassica carinata HOM05D006639 ORTHO05D008339 2.6e-27 125.9 155 46.5
C04p24130 Brassica napus HOM05D006639 ORTHO05D008339 2.6e-27 125.9 155 46.5
BolC4t23910H Brassica oleracea HOM05D006639 ORTHO05D008339 2.6e-27 125.9 155 46.5
DCAR_010346 Daucus carota HOM05D006639 ORTHO05D008339 3.3e-27 125.6 122 59.8
Oeu031474.1 Olea europaea HOM05D006639 ORTHO05D008339 3.3e-27 125.6 118 56.8
Prupe.6G130500 Prunus persica HOM05D006639 ORTHO05D008339 3.3e-27 125.6 156 52.6
Thhalv10017865m.g Eutrema salsugineum HOM05D006639 ORTHO05D008339 7.4e-27 124.4 89 66.3
SGA_v2.0_scaffold22G09859 Striga asiatica HOM05D006639 ORTHO05D008339 7.4e-27 124.4 144 50.0
Cfa010012 Carpinus fangiana HOM05D006639 ORTHO05D008339 9.7e-27 124.0 125 56.8
PGSC0003DMG400026357 Solanum tuberosum HOM05D006639 ORTHO05D008339 1.3e-26 123.6 144 52.1
Atru.BG.107.p Acer truncatum HOM05D006639 ORTHO05D008339 1.7e-26 123.2 86 68.6
FAN11G3713 Fragaria x ananassa HOM05D006639 ORTHO05D008339 1.7e-26 123.2 91 68.1
Migut.D02442 Erythranthe guttata HOM05D006639 ORTHO05D008339 4.8e-26 121.7 144 49.3
Lj2A964T5 Lonicera japonica HOM05D006639 ORTHO05D008339 4.8e-26 121.7 94 64.9
Atru.chr3.3238 Acer truncatum HOM05D006639 ORTHO05D008339 1.1e-25 120.6 81 70.4
MSTRG.18760 Avicennia marina HOM05D006639 ORTHO05D008339 2.4e-25 119.4 144 47.9
Lj2A946T24 Lonicera japonica HOM05D006639 ORTHO05D008339 2.4e-25 119.4 94 63.8
AagrBONN_evm.TU.Sc2ySwM_362.1778 Anthoceros agrestis HOM05D006639 ORTHO05D008339 5.3e-25 118.2 158 48.7
Mapoly0105s0006 Marchantia polymorpha HOM05D006639 ORTHO05D008339 9.1e-25 117.5 119 52.9
Pp3c26_8280 Physcomitrium patens HOM05D006639 ORTHO05D008339 1.3e-23 113.6 155 46.5
BolC3t15529H Brassica oleracea HOM05D006639 ORTHO05D008339 2.9e-23 112.5 150 45.3
DCAR_006164 Daucus carota HOM05D006639 ORTHO05D008339 5.0e-23 111.7 94 59.6
C03p31860 Brassica napus HOM05D006639 ORTHO05D008339 8.5e-23 110.9 149 45.0
BcaC01g04942 Brassica carinata HOM05D006639 ORTHO05D008339 1.4e-22 110.2 148 45.3
SMO340G0007 Selaginella moellendorffii HOM05D006639 ORTHO05D008339 2.5e-22 109.4 115 50.4
SEGI_32267 Sequoiadendron giganteum HOM05D006639 ORTHO05D008339 9.4e-22 107.5 164 42.1
BcaB01g03073 Brassica carinata HOM05D006639 ORTHO05D008339 5.2e-20 101.7 162 40.7
ECA238G0189 Erigeron canadensis HOM05D006639 ORTHO05D008339 8.8e-20 100.9 140 47.9
MCO15G204 Micromonas commoda HOM05D006639 ORTHO05D008339 1.7e-18 96.7 109 47.7
PRCOL_00006285 Prasinoderma coloniale HOM05D006639 ORTHO05D008339 8.2e-18 94.4 111 46.8
Cre07.g341800 Chlamydomonas reinhardtii HOM05D006639 ORTHO05D008339 1.2e-16 90.5 93 43.0
Nn1g05220 Nelumbo nucifera HOM05D006639 ORTHO05D008339 4.8e-10 68.6 59 59.3
Nn1g05039 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.8e-09 66.6 57 59.6
Nn053s41924 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.2e-08 63.9 57 57.9
Nn1g05215 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.2e-08 63.9 57 57.9
Nn1g05216 Nelumbo nucifera HOM05D006639 ORTHO05D008339 1.2e-08 63.9 57 57.9
HanXRQChr14g0445301 Helianthus annuus HOM05D000297 ORTHO05D000193 2.5e-06 56.2 90 33.3
Hma1.2p1_1402F.1_g281160 Hydrangea macrophylla HOM05D000297 ORTHO05D000193 5.5e-06 55.1 105 32.4
Nn135s43805 Nelumbo nucifera HOM05D066312 ORTHO05D008339 5.5e-06 55.1 52 59.6
PGR004G1997 Punica granatum HOM05D000297 ORTHO05D000193 5.5e-06 55.1 99 34.3
FvH4_6g40600 Fragaria vesca HOM05D000297 ORTHO05D000193 7.2e-06 54.7 106 32.1
FAN05G0577 Fragaria x ananassa HOM05D000297 ORTHO05D000193 7.2e-06 54.7 106 32.1
FAN09G3314 Fragaria x ananassa HOM05D000297 ORTHO05D000193 7.2e-06 54.7 106 32.1
FAN14G1515 Fragaria x ananassa HOM05D000297 ORTHO05D000193 7.2e-06 54.7 106 32.1
HanXRQChr16g0511681 Helianthus annuus HOM05D000297 ORTHO05D000193 7.2e-06 54.7 90 35.6
Duzib170G1080 Durio zibethinus HOM05D000297 ORTHO05D000193 9.4e-06 54.3 102 33.3
FAN02G3572 Fragaria x ananassa HOM05D000297 ORTHO05D000193 9.4e-06 54.3 106 32.1
Lsat_1_v5_gn_6_29620 Lactuca sativa HOM05D000297 ORTHO05D000193 9.4e-06 54.3 91 33.0
MBI14_g28169_MAGBIO Magnolia biondii HOM05D000297 ORTHO05D000193 9.4e-06 54.3 107 35.5


User provided reference genes

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