Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1355 Ceratophyllum demersum HOM05D005517 ORTHO05D006760 3.3e-31 137.9 77 100.0
TAR371G1004 Trochodendron aralioides HOM05D005517 ORTHO05D006760 1.1e-23 112.8 77 79.2
GSVIVG01028670001 Vitis vinifera HOM05D005517 ORTHO05D006760 1.6e-22 109.0 77 76.6
TAR629G2363 Trochodendron aralioides HOM05D005517 ORTHO05D006760 4.8e-22 107.5 77 72.7
Nn3g16415 Nelumbo nucifera HOM05D005517 ORTHO05D006760 1.1e-21 106.3 77 75.3
CANSAT64G1159 Cannabis sativa HOM05D005517 ORTHO05D006760 9.0e-21 103.2 77 74.0
Atru.chr6.2589 Acer truncatum HOM05D005517 ORTHO05D006760 4.5e-20 100.9 73 72.6
Cpa.g.sc70.124 Carica papaya HOM05D005517 ORTHO05D006760 4.5e-20 100.9 73 72.6
Ciclev10017370m.g Citrus clementina HOM05D005517 ORTHO05D006760 4.5e-20 100.9 73 72.6
Manes.15G162502 Manihot esculenta HOM05D005517 ORTHO05D006760 5.9e-20 100.5 77 70.1
CiPaw.03G057500 Carya illinoinensis HOM05D005517 ORTHO05D006760 1.0e-19 99.8 77 71.4
CAN.G473.115 Capsicum annuum HOM05D005517 ORTHO05D006760 2.2e-19 98.6 77 75.3
MBI06_g06692_MAGBIO Magnolia biondii HOM05D005517 ORTHO05D006760 2.2e-19 98.6 73 74.0
Solyc04g009570.3 Solanum lycopersicum HOM05D005517 ORTHO05D006760 2.9e-19 98.2 77 72.7
BcaB01g06344 Brassica carinata HOM05D005517 ORTHO05D006760 3.8e-19 97.8 73 65.8
Sopen02g038880 Solanum pennellii HOM05D005517 ORTHO05D006760 3.8e-19 97.8 77 74.0
PGSC0003DMG402020250 Solanum tuberosum HOM05D005517 ORTHO05D006760 3.8e-19 97.8 77 74.0
Aqoxy1G01489 Aquilegia oxysepala HOM05D005517 ORTHO05D006760 6.5e-19 97.1 77 68.8
PSO210G3561 Papaver somniferum HOM05D005517 ORTHO05D006760 6.5e-19 97.1 77 70.1
Hund05668 Selenicereus undatus HOM05D005517 ORTHO05D006760 6.5e-19 97.1 78 73.1
THA.LOC104803813 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 6.5e-19 97.1 73 67.1
Glyma.19G093900 Glycine max HOM05D005517 ORTHO05D006760 8.5e-19 96.7 77 67.5
EL10Ac7g18130 Beta vulgaris HOM05D005517 ORTHO05D006760 1.1e-18 96.3 74 73.0
Dinv33325 Davidia involucrata HOM05D005517 ORTHO05D006760 1.1e-18 96.3 77 70.1
Sopen04g004730 Solanum pennellii HOM05D005517 ORTHO05D006760 1.1e-18 96.3 77 71.4
PGSC0003DMG400032535 Solanum tuberosum HOM05D005517 ORTHO05D006760 1.1e-18 96.3 77 71.4
Duzib264G0094 Durio zibethinus HOM05D005517 ORTHO05D006760 1.9e-18 95.5 69 72.5
PSO302G0245 Papaver somniferum HOM05D005517 ORTHO05D006760 1.9e-18 95.5 77 66.2
Thecc.04G039500 Theobroma cacao HOM05D005517 ORTHO05D006760 1.9e-18 95.5 69 72.5
ClCG05G013610 Citrullus lanatus HOM05D005517 ORTHO05D006760 3.2e-18 94.7 77 70.1
Duzib147G1371 Durio zibethinus HOM05D005517 ORTHO05D006760 3.2e-18 94.7 73 72.6
Os05g0517800 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 3.2e-18 94.7 78 67.9
Potri.001G328100 Populus trichocarpa HOM05D005517 ORTHO05D006760 3.2e-18 94.7 77 64.9
vmacro22457 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 3.2e-18 94.7 77 71.4
Aa31LG11G14910 Aethionema arabicum HOM05D005517 ORTHO05D006760 4.2e-18 94.4 73 65.8
Glyma.16G054600 Glycine max HOM05D005517 ORTHO05D006760 5.5e-18 94.0 76 63.2
HanXRQChr02g0035131 Helianthus annuus HOM05D005517 ORTHO05D006760 5.5e-18 94.0 73 72.6
Lsat_1_v5_gn_1_29421 Lactuca sativa HOM05D005517 ORTHO05D006760 7.2e-18 93.6 73 71.2
Cc10_g16370 Coffea canephora HOM05D005517 ORTHO05D006760 9.3e-18 93.2 77 72.7
Gohir.A07G229900 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.3e-18 93.2 68 72.1
Gohir.D07G237100 Gossypium hirsutum HOM05D005517 ORTHO05D006760 9.3e-18 93.2 68 72.1
Gorai.001G273000 Gossypium raimondii HOM05D005517 ORTHO05D006760 9.3e-18 93.2 68 72.1
Potri.017G066388 Populus trichocarpa HOM05D005517 ORTHO05D006760 1.2e-17 92.8 73 64.4
Hund07167 Selenicereus undatus HOM05D005517 ORTHO05D006760 1.2e-17 92.8 77 64.9
HPP92_000894 Vanilla planifolia HOM05D005517 ORTHO05D006760 1.2e-17 92.8 77 66.2
CSS0012820 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.6e-17 92.4 77 67.5
Lalb_Chr05g0214841 Lupinus albus HOM05D005517 ORTHO05D006760 1.6e-17 92.4 77 67.5
Peaxi162Scf00420g00633 Petunia axillaris HOM05D005517 ORTHO05D006760 1.6e-17 92.4 77 66.2
CARHR199240 Cardamine hirsuta HOM05D005517 ORTHO05D006760 2.1e-17 92.0 73 63.0
Duzib187G1036 Durio zibethinus HOM05D005517 ORTHO05D006760 2.1e-17 92.0 69 69.6
ECA232G0857 Erigeron canadensis HOM05D005517 ORTHO05D006760 2.1e-17 92.0 73 71.2
Sabra17G0058600 Salix brachista HOM05D005517 ORTHO05D006760 2.1e-17 92.0 73 64.4
CiPaw.04G038900 Carya illinoinensis HOM05D005517 ORTHO05D006760 2.7e-17 91.7 69 72.5
COL.COLO4_13282 Corchorus olitorius HOM05D005517 ORTHO05D006760 2.7e-17 91.7 68 70.6
Lsat_1_v5_gn_4_78980 Lactuca sativa HOM05D005517 ORTHO05D006760 2.7e-17 91.7 72 73.6
Nitab4.5_0007375g0080 Nicotiana tabacum HOM05D005517 ORTHO05D006760 2.7e-17 91.7 77 68.8
Phvul.001G091300 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 2.7e-17 91.7 77 63.6
TWI74G0054 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.7e-17 91.7 77 66.2
TWI74G0227 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.7e-17 91.7 77 66.2
BcaC04g19059 Brassica carinata HOM05D005517 ORTHO05D006760 3.6e-17 91.3 73 60.3
C09p63000 Brassica napus HOM05D005517 ORTHO05D006760 3.6e-17 91.3 73 60.3
BolC9t59138H Brassica oleracea HOM05D005517 ORTHO05D006760 3.6e-17 91.3 73 60.3
Dinv25651 Davidia involucrata HOM05D005517 ORTHO05D006760 3.6e-17 91.3 77 67.5
Cc03_g13370 Coffea canephora HOM05D005517 ORTHO05D006760 4.6e-17 90.9 77 68.8
Migut.F00052 Erythranthe guttata HOM05D005517 ORTHO05D006760 4.6e-17 90.9 77 67.5
Eucgr.H04420 Eucalyptus grandis HOM05D005517 ORTHO05D006760 4.6e-17 90.9 77 67.5
Aa31LG5G11080 Aethionema arabicum HOM05D005517 ORTHO05D006760 6.1e-17 90.5 70 68.6
BcaB08g36959 Brassica carinata HOM05D005517 ORTHO05D006760 6.1e-17 90.5 73 58.9
A10p24320 Brassica napus HOM05D005517 ORTHO05D006760 7.9e-17 90.1 73 58.9
BraA10t44498Z Brassica rapa HOM05D005517 ORTHO05D006760 7.9e-17 90.1 73 58.9
HanXRQChr16g0497941 Helianthus annuus HOM05D005517 ORTHO05D006760 7.9e-17 90.1 73 71.2
Carub.0006s1230 Capsella rubella HOM05D005517 ORTHO05D006760 1.0e-16 89.7 74 63.5
Hma1.2p1_1057F.1_g252720 Hydrangea macrophylla HOM05D005517 ORTHO05D006760 1.0e-16 89.7 73 67.1
Oeu063019.1 Olea europaea HOM05D005517 ORTHO05D006760 1.0e-16 89.7 77 68.8
Ca_26962_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 1.8e-16 89.0 77 66.2
Gohir.D04G075800 Gossypium hirsutum HOM05D005517 ORTHO05D006760 1.8e-16 89.0 69 65.2
AT5G14105 Arabidopsis thaliana HOM05D005517 ORTHO05D006760 2.3e-16 88.6 74 63.5
Medtr7g028755 Medicago truncatula HOM05D005517 ORTHO05D006760 2.3e-16 88.6 77 66.2
BcaC03g13514 Brassica carinata HOM05D005517 ORTHO05D006760 3.0e-16 88.2 73 57.5
BcaC03g13515 Brassica carinata HOM05D005517 ORTHO05D006760 3.0e-16 88.2 73 57.5
BcaNung06018 Brassica carinata HOM05D005517 ORTHO05D006760 3.0e-16 88.2 73 57.5
MELO3C014894.2 Cucumis melo HOM05D005517 ORTHO05D006760 3.0e-16 88.2 77 64.9
QL02p071008 Quercus lobata HOM05D005517 ORTHO05D006760 3.0e-16 88.2 64 73.4
QL10p050767 Quercus lobata HOM05D005517 ORTHO05D006760 3.0e-16 88.2 68 70.6
A02p02340 Brassica napus HOM05D005517 ORTHO05D006760 3.9e-16 87.8 73 57.5
BraA02t05205Z Brassica rapa HOM05D005517 ORTHO05D006760 3.9e-16 87.8 73 57.5
Lalb_Chr16g0380111 Lupinus albus HOM05D005517 ORTHO05D006760 3.9e-16 87.8 77 64.9
Zm00001eb293020 Zea mays HOM05D005517 ORTHO05D006760 3.9e-16 87.8 78 62.8
Rhsim10G0005200 Rhododendron simsii HOM05D005517 ORTHO05D006760 6.7e-16 87.0 77 66.2
FvH4_5g10930 Fragaria vesca HOM05D005517 ORTHO05D006760 8.7e-16 86.7 76 63.2
FAN08G0577 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.7e-16 86.7 76 63.2
FAN13G3313 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.7e-16 86.7 76 63.2
FAN18G2496 Fragaria x ananassa HOM05D005517 ORTHO05D006760 8.7e-16 86.7 76 63.2
CSS0038475 Camellia sinensis var. sinensis HOM05D005517 ORTHO05D006760 1.1e-15 86.3 77 63.6
Lj1g0000511 Lotus japonicus HOM05D005517 ORTHO05D006760 1.1e-15 86.3 77 62.3
Psat5g229880 Pisum sativum HOM05D005517 ORTHO05D006760 1.1e-15 86.3 77 62.3
Rhsim08G0041900 Rhododendron simsii HOM05D005517 ORTHO05D006760 1.1e-15 86.3 77 62.3
CsaV3_3G026940 Cucumis sativus L. HOM05D005517 ORTHO05D006760 1.5e-15 85.9 77 63.6
TPR.G30072 Trifolium pratense HOM05D005517 ORTHO05D006760 1.5e-15 85.9 77 63.6
arahy.Tifrunner.gnm1.ann1.3828X0 Arachis hypogaea HOM05D005517 ORTHO05D006760 2.5e-15 85.1 77 62.3
Prupe.5G129500 Prunus persica HOM05D005517 ORTHO05D006760 2.5e-15 85.1 77 63.6
RcHm_v2.0_Chr1g0371371 Rosa chinensis HOM05D005517 ORTHO05D006760 2.5e-15 85.1 77 62.3
RcHm_v2.0_Chr7g0186891 Rosa chinensis HOM05D005517 ORTHO05D006760 2.5e-15 85.1 77 62.3
AUR62006995 Chenopodium quinoa HOM05D005517 ORTHO05D006760 4.3e-15 84.3 75 58.7
Medtr3g007670 Medicago truncatula HOM05D005517 ORTHO05D006760 4.3e-15 84.3 78 64.1
SEGI_12962 Sequoiadendron giganteum HOM05D005517 ORTHO05D006760 4.3e-15 84.3 77 55.8
AUR62000640 Chenopodium quinoa HOM05D005517 ORTHO05D006760 5.7e-15 84.0 69 60.9
Psat6g022360 Pisum sativum HOM05D005517 ORTHO05D006760 5.7e-15 84.0 77 62.3
Ca_14034_v3 Cicer arietinum L. HOM05D005517 ORTHO05D006760 9.7e-15 83.2 69 63.8
BcaC03g13513 Brassica carinata HOM05D005517 ORTHO05D006760 1.3e-14 82.8 72 54.2
C02p06560 Brassica napus HOM05D005517 ORTHO05D006760 1.6e-14 82.4 73 56.2
EL10Ac4g09777 Beta vulgaris HOM05D005517 ORTHO05D006760 2.8e-14 81.6 75 61.3
MD14G1126500 Malus domestica HOM05D005517 ORTHO05D006760 6.3e-14 80.5 73 60.3
Haze_14891 Corylus avellana HOM05D005517 ORTHO05D006760 1.8e-13 79.0 51 80.4
MD06G1118400 Malus domestica HOM05D005517 ORTHO05D006760 1.8e-13 79.0 73 58.9
TWI34G0084 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.4e-13 78.6 77 61.0
TWI34G1158 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 2.4e-13 78.6 77 61.0
TWI60G0382 Tripterygium wilfordii HOM05D005517 ORTHO05D006760 4.1e-13 77.8 77 62.3
Thhalv10021865m.g Eutrema salsugineum HOM05D005517 ORTHO05D006760 6.9e-13 77.0 76 59.2
PGR142G3118 Punica granatum HOM05D005517 ORTHO05D006760 4.5e-12 74.3 55 70.9
Peaxi162Scf00064g01122 Petunia axillaris HOM05D005517 ORTHO05D006760 7.7e-12 73.6 66 57.6
Phvul.009G125500 Phaseolus vulgaris HOM05D005517 ORTHO05D006760 1.3e-11 72.8 52 69.2
TPR.G36037 Trifolium pratense HOM05D005517 ORTHO05D006760 2.9e-11 71.6 50 72.0
vmacro05969 Vaccinium macrocarpon HOM05D005517 ORTHO05D006760 2.9e-11 71.6 72 56.9
AagrBONN_evm.TU.Sc2ySwM_228.2988 Anthoceros agrestis HOM05D005517 ORTHO05D006760 6.5e-11 70.5 77 55.8
Cc02_g28320 Coffea canephora HOM05D005517 ORTHO05D006760 8.5e-11 70.1 59 67.8
arahy.Tifrunner.gnm1.ann1.9JMW1H Arachis hypogaea HOM05D005517 ORTHO05D006760 1.4e-10 69.3 49 71.4
Os03g0733000 Oryza sativa ssp. japonica HOM05D005517 ORTHO05D006760 1.9e-10 68.9 74 55.4
THA.LOC104814182 Tarenaya hassleriana HOM05D005517 ORTHO05D006760 4.2e-10 67.8 124 37.9
Mapoly0055s0070 Marchantia polymorpha HOM05D005517 ORTHO05D006760 9.4e-10 66.6 77 54.5
Sabra16G0209900 Salix brachista HOM05D005517 ORTHO05D006760 9.4e-10 66.6 136 36.0
Pp3c1_33450 Physcomitrium patens HOM05D005517 ORTHO05D006760 7.9e-09 63.5 68 48.5
Prupe.2G009500 Prunus persica HOM05D005517 ORTHO05D006760 1.0e-08 63.2 77 51.9
Pp3c14_7680 Physcomitrium patens HOM05D005517 ORTHO05D006760 7.4e-07 57.0 59 49.2
Sed0001513 Sechium edule HOM05D005517 ORTHO05D006760 4.8e-06 54.3 34 82.4


User provided reference genes

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