Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1337 Ceratophyllum demersum HOM05D003740 ORTHO05D004611 3.2e-212 741.5 377 100.0
Dinv05312 Davidia involucrata HOM05D003740 ORTHO05D004611 4.7e-171 604.7 354 84.2
Dinv34246 Davidia involucrata HOM05D003740 ORTHO05D004611 6.8e-170 600.9 354 84.2
TWI53G1619 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 2.0e-169 599.4 361 81.2
PGR004G2716 Punica granatum HOM05D003740 ORTHO05D004611 2.6e-169 599.0 358 82.7
Ciclev10005020m.g Citrus clementina HOM05D003740 ORTHO05D004611 9.8e-169 597.0 361 81.7
RcHm_v2.0_Chr3g0484361 Rosa chinensis HOM05D003740 ORTHO05D004611 9.8e-169 597.0 361 82.3
GSVIVG01033552001 Vitis vinifera HOM05D003740 ORTHO05D004611 2.8e-168 595.5 354 82.8
TWI74G0940 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 3.7e-168 595.1 361 80.6
CSS0019779 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 6.3e-168 594.3 360 82.2
Lj5g0015883 Lotus japonicus HOM05D003740 ORTHO05D004611 6.3e-168 594.3 354 83.3
Migut.J01706 Erythranthe guttata HOM05D003740 ORTHO05D004611 8.3e-168 594.0 369 81.3
VMungo0720G0943 Vigna mungo HOM05D003740 ORTHO05D004611 8.3e-168 594.0 354 83.6
Eucgr.A02296 Eucalyptus grandis HOM05D003740 ORTHO05D004611 1.8e-167 592.8 354 82.5
MBI13_g04792_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 2.4e-167 592.4 334 88.3
Prupe.7G050100 Prunus persica HOM05D003740 ORTHO05D004611 2.4e-167 592.4 354 81.9
Ah.13g076780 Amaranthus hybridus HOM05D003740 ORTHO05D004611 4.1e-167 591.7 361 81.7
Cfa016754 Carpinus fangiana HOM05D003740 ORTHO05D004611 4.1e-167 591.7 361 81.7
Glyma.10G105900 Glycine max HOM05D003740 ORTHO05D004611 4.1e-167 591.7 354 82.5
Manes.08G053600 Manihot esculenta HOM05D003740 ORTHO05D004611 4.1e-167 591.7 361 79.5
Phvul.007G249500 Phaseolus vulgaris HOM05D003740 ORTHO05D004611 5.4e-167 591.3 354 83.6
Migut.K00119 Erythranthe guttata HOM05D003740 ORTHO05D004611 7.0e-167 590.9 354 83.3
HanXRQChr10g0277771 Helianthus annuus HOM05D003740 ORTHO05D004611 9.1e-167 590.5 354 82.8
Medtr3g045150 Medicago truncatula HOM05D003740 ORTHO05D004611 9.1e-167 590.5 354 83.1
Thecc.05G145300 Theobroma cacao HOM05D003740 ORTHO05D004611 9.1e-167 590.5 361 81.4
Actinidia39193 Actinidia chinensis HOM05D003740 ORTHO05D004611 1.6e-166 589.7 354 83.1
MSTRG.10801 Avicennia marina HOM05D003740 ORTHO05D004611 1.6e-166 589.7 354 82.2
Rhsim03G0031000 Rhododendron simsii HOM05D003740 ORTHO05D004611 1.6e-166 589.7 354 83.1
Sed0013360 Sechium edule HOM05D003740 ORTHO05D004611 1.6e-166 589.7 354 81.6
Gorai.006G134300 Gossypium raimondii HOM05D003740 ORTHO05D004611 2.0e-166 589.3 369 79.1
ClCG04G004010 Citrullus lanatus HOM05D003740 ORTHO05D004611 2.7e-166 589.0 354 81.1
Glyma.02G190700 Glycine max HOM05D003740 ORTHO05D004611 2.7e-166 589.0 353 82.7
MD12G1086200 Malus domestica HOM05D003740 ORTHO05D004611 2.7e-166 589.0 354 81.1
TWI77G0796 Tripterygium wilfordii HOM05D003740 ORTHO05D004611 2.7e-166 589.0 361 80.6
MELO3C014202.2 Cucumis melo HOM05D003740 ORTHO05D004611 3.5e-166 588.6 354 81.6
CsaV3_4G027630 Cucumis sativus L. HOM05D003740 ORTHO05D004611 3.5e-166 588.6 354 81.6
FAN05G1357 Fragaria x ananassa HOM05D003740 ORTHO05D004611 4.5e-166 588.2 369 79.4
Medtr0012s0090 Medicago truncatula HOM05D003740 ORTHO05D004611 4.5e-166 588.2 354 82.8
FvH4_6g24760 Fragaria vesca HOM05D003740 ORTHO05D004611 5.9e-166 587.8 369 79.4
FAN09G1292 Fragaria x ananassa HOM05D003740 ORTHO05D004611 5.9e-166 587.8 369 79.4
Gohir.D09G116000 Gossypium hirsutum HOM05D003740 ORTHO05D004611 5.9e-166 587.8 360 80.6
MD14G1080600 Malus domestica HOM05D003740 ORTHO05D004611 5.9e-166 587.8 355 81.4
QL07p005086 Quercus lobata HOM05D003740 ORTHO05D004611 7.7e-166 587.4 353 82.7
Peaxi162Scf00130g01015 Petunia axillaris HOM05D003740 ORTHO05D004611 1.0e-165 587.0 376 78.7
Haze_19750 Corylus avellana HOM05D003740 ORTHO05D004611 1.3e-165 586.6 361 81.4
Gohir.A09G119800 Gossypium hirsutum HOM05D003740 ORTHO05D004611 1.3e-165 586.6 360 80.3
TPR.G19664 Trifolium pratense HOM05D003740 ORTHO05D004611 1.3e-165 586.6 354 82.8
THA.LOC104816968 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 1.7e-165 586.3 361 79.8
Prupe.1G032300 Prunus persica HOM05D003740 ORTHO05D004611 2.2e-165 585.9 354 81.1
A05p02310 Brassica napus HOM05D003740 ORTHO05D004611 3.8e-165 585.1 354 81.6
BraA05t19226Z Brassica rapa HOM05D003740 ORTHO05D004611 3.8e-165 585.1 354 81.4
Lalb_Chr02g0156411 Lupinus albus HOM05D003740 ORTHO05D004611 3.8e-165 585.1 360 81.1
Lalb_Chr21g0316601 Lupinus albus HOM05D003740 ORTHO05D004611 3.8e-165 585.1 360 80.8
Sed0006234 Sechium edule HOM05D003740 ORTHO05D004611 8.5e-165 583.9 354 81.4
Actinidia38142 Actinidia chinensis HOM05D003740 ORTHO05D004611 1.1e-164 583.6 354 82.8
Psat6g118200 Pisum sativum HOM05D003740 ORTHO05D004611 1.1e-164 583.6 371 79.8
AL4G39580 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 1.5e-164 583.2 354 80.8
MSTRG.26143 Avicennia marina HOM05D003740 ORTHO05D004611 1.5e-164 583.2 354 82.5
C04p02750 Brassica napus HOM05D003740 ORTHO05D004611 1.5e-164 583.2 354 81.4
BolC4t21915H Brassica oleracea HOM05D003740 ORTHO05D004611 1.5e-164 583.2 354 81.4
THA.LOC104803288 Tarenaya hassleriana HOM05D003740 ORTHO05D004611 1.5e-164 583.2 354 81.1
Ca_25790_v3 Cicer arietinum L. HOM05D003740 ORTHO05D004611 1.9e-164 582.8 354 81.9
Atru.chr6.1381 Acer truncatum HOM05D003740 ORTHO05D004611 2.5e-164 582.4 361 80.3
EL10Ac3g07158 Beta vulgaris HOM05D003740 ORTHO05D004611 4.2e-164 581.6 355 82.5
BcaNung06793 Brassica carinata HOM05D003740 ORTHO05D004611 4.2e-164 581.6 354 81.4
AT2G41490 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 7.2e-164 580.9 354 80.5
CARHR136610 Cardamine hirsuta HOM05D003740 ORTHO05D004611 9.4e-164 580.5 354 80.8
PSO384G1999 Papaver somniferum HOM05D003740 ORTHO05D004611 9.4e-164 580.5 373 77.7
CiPaw.09G042200 Carya illinoinensis HOM05D003740 ORTHO05D004611 1.2e-163 580.1 354 81.6
Nn7g37216 Nelumbo nucifera HOM05D003740 ORTHO05D004611 1.2e-163 580.1 361 79.5
PSO339G5696 Papaver somniferum HOM05D003740 ORTHO05D004611 1.6e-163 579.7 373 77.7
PGSC0003DMG400012722 Solanum tuberosum HOM05D003740 ORTHO05D004611 2.1e-163 579.3 354 80.8
arahy.Tifrunner.gnm1.ann1.0DR8LC Arachis hypogaea HOM05D003740 ORTHO05D004611 2.7e-163 578.9 375 77.3
Nn6g34910 Nelumbo nucifera HOM05D003740 ORTHO05D004611 2.7e-163 578.9 361 79.2
Sp4g23760 Schrenkiella parvula HOM05D003740 ORTHO05D004611 2.7e-163 578.9 354 80.8
Solyc04g016520.3 Solanum lycopersicum HOM05D003740 ORTHO05D004611 6.1e-163 577.8 354 80.2
Sopen04g008590 Solanum pennellii HOM05D003740 ORTHO05D004611 6.1e-163 577.8 354 80.2
ECA233G5682 Erigeron canadensis HOM05D003740 ORTHO05D004611 1.0e-162 577.0 350 81.1
FAN02G1973 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.0e-162 577.0 386 75.9
RcHm_v2.0_Chr3g0484511 Rosa chinensis HOM05D003740 ORTHO05D004611 1.0e-162 577.0 361 80.6
SEGI_04340 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 2.3e-162 575.9 354 79.4
arahy.Tifrunner.gnm1.ann1.G7Z7YE Arachis hypogaea HOM05D003740 ORTHO05D004611 4.0e-162 575.1 376 77.1
AL5G38710 Arabidopsis lyrata HOM05D003740 ORTHO05D004611 6.8e-162 574.3 354 79.9
BcaB02g08329 Brassica carinata HOM05D003740 ORTHO05D004611 8.8e-162 573.9 354 79.7
C08p32520 Brassica napus HOM05D003740 ORTHO05D004611 8.8e-162 573.9 354 79.9
BolC8t50867H Brassica oleracea HOM05D003740 ORTHO05D004611 8.8e-162 573.9 354 79.9
Carub.0004s2379 Capsella rubella HOM05D003740 ORTHO05D004611 8.8e-162 573.9 354 79.9
Thhalv10016688m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 8.8e-162 573.9 356 80.9
Oeu006922.2 Olea europaea HOM05D003740 ORTHO05D004611 8.8e-162 573.9 357 81.0
BcaC02g09904 Brassica carinata HOM05D003740 ORTHO05D004611 1.5e-161 573.2 354 79.4
C04p35340 Brassica napus HOM05D003740 ORTHO05D004611 1.5e-161 573.2 354 79.4
BolC4t25088H Brassica oleracea HOM05D003740 ORTHO05D004611 1.5e-161 573.2 354 79.4
A09p50150 Brassica napus HOM05D003740 ORTHO05D004611 2.0e-161 572.8 354 79.7
BraA09t40467Z Brassica rapa HOM05D003740 ORTHO05D004611 2.0e-161 572.8 354 79.7
Thhalv10005999m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 3.4e-161 572.0 354 79.9
Thhalv10007732m.g Eutrema salsugineum HOM05D003740 ORTHO05D004611 3.4e-161 572.0 354 79.9
AT3G57220 Arabidopsis thaliana HOM05D003740 ORTHO05D004611 4.4e-161 571.6 354 78.8
BraA04t16052Z Brassica rapa HOM05D003740 ORTHO05D004611 7.5e-161 570.9 354 79.9
Carub.0005s2403 Capsella rubella HOM05D003740 ORTHO05D004611 9.8e-161 570.5 354 79.7
Os07g0661100 Oryza sativa ssp. japonica HOM05D003740 ORTHO05D004611 2.8e-160 568.9 354 78.5
SGA_v2.0_scaffold105G30359 Striga asiatica HOM05D003740 ORTHO05D004611 3.7e-160 568.5 343 82.8
DCAR_020539 Daucus carota HOM05D003740 ORTHO05D004611 4.9e-160 568.2 342 83.6
Cc06_g18360 Coffea canephora HOM05D003740 ORTHO05D004611 1.4e-159 566.6 354 80.2
TAR636G0750 Trochodendron aralioides HOM05D003740 ORTHO05D004611 1.4e-159 566.6 337 84.3
CAN.G1237.3 Capsicum annuum HOM05D003740 ORTHO05D004611 1.8e-159 566.2 335 82.4
Lsat_1_v5_gn_6_15201 Lactuca sativa HOM05D003740 ORTHO05D004611 3.1e-159 565.5 341 81.8
unitig_748.g7227 Utricularia gibba HOM05D003740 ORTHO05D004611 3.1e-159 565.5 377 75.9
A04p03820 Brassica napus HOM05D003740 ORTHO05D004611 4.1e-159 565.1 335 82.1
Sabra16G0047800 Salix brachista HOM05D003740 ORTHO05D004611 5.4e-159 564.7 354 78.2
AUR62024529 Chenopodium quinoa HOM05D003740 ORTHO05D004611 3.5e-158 562.0 355 79.2
Potri.006G045700 Populus trichocarpa HOM05D003740 ORTHO05D004611 3.5e-158 562.0 354 77.1
Atru.chr1.1193 Acer truncatum HOM05D003740 ORTHO05D004611 5.9e-158 561.2 343 81.0
Rhsim04G0107900 Rhododendron simsii HOM05D003740 ORTHO05D004611 1.3e-157 560.1 379 76.0
FAN14G5242 Fragaria x ananassa HOM05D003740 ORTHO05D004611 1.7e-157 559.7 351 79.2
Duzib128G1723 Durio zibethinus HOM05D003740 ORTHO05D004611 3.8e-157 558.5 341 80.9
AUR62026121 Chenopodium quinoa HOM05D003740 ORTHO05D004611 5.0e-157 558.1 354 79.1
Aa31LG1G23510 Aethionema arabicum HOM05D003740 ORTHO05D004611 1.1e-156 557.0 354 76.8
Sc13g0001500 Simmondsia chinensis HOM05D003740 ORTHO05D004611 3.3e-156 555.4 343 79.3
Aqoxy2G02041 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 7.2e-156 554.3 354 78.0
CANSAT80G1359 Cannabis sativa HOM05D003740 ORTHO05D004611 9.5e-156 553.9 361 75.6
CANSAT80G1617 Cannabis sativa HOM05D003740 ORTHO05D004611 9.5e-156 553.9 361 75.6
Zm00001eb110840 Zea mays HOM05D003740 ORTHO05D004611 8.0e-155 550.8 361 76.7
CSS0009879 Camellia sinensis var. sinensis HOM05D003740 ORTHO05D004611 1.4e-154 550.1 354 78.2
COL.COLO4_21300 Corchorus olitorius HOM05D003740 ORTHO05D004611 2.0e-153 546.2 379 73.1
Zm00001eb329870 Zea mays HOM05D003740 ORTHO05D004611 9.8e-153 543.9 354 76.8
Aa31LG10G12120 Aethionema arabicum HOM05D003740 ORTHO05D004611 2.4e-151 539.3 402 69.7
BcaC07g40064 Brassica carinata HOM05D003740 ORTHO05D004611 7.0e-151 537.7 322 81.1
Nitab4.5_0000826g0260 Nicotiana tabacum HOM05D003740 ORTHO05D004611 3.0e-149 532.3 366 74.3
Lj2A390G27 Lonicera japonica HOM05D003740 ORTHO05D004611 1.1e-148 530.4 362 76.0
Potri.016G042100 Populus trichocarpa HOM05D003740 ORTHO05D004611 1.9e-148 529.6 336 77.4
SMO364G0515 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 7.3e-148 527.7 381 70.9
Lj1A1122T44 Lonicera japonica HOM05D003740 ORTHO05D004611 1.2e-147 526.9 361 74.5
Duzib106G0923 Durio zibethinus HOM05D003740 ORTHO05D004611 4.7e-147 525.0 361 74.0
TAR633G2274 Trochodendron aralioides HOM05D003740 ORTHO05D004611 2.0e-145 519.6 320 80.6
Pp3c2_18380 Physcomitrium patens HOM05D003740 ORTHO05D004611 3.4e-145 518.8 364 72.0
SalBow1G2954 Salvia bowleyana HOM05D003740 ORTHO05D004611 3.5e-142 508.8 390 70.0
TPR.G2316 Trifolium pratense HOM05D003740 ORTHO05D004611 8.6e-141 504.2 354 71.8
Mapoly0120s0027 Marchantia polymorpha HOM05D003740 ORTHO05D004611 1.1e-135 487.3 367 66.5
RcHm_v2.0_Chr3g0484421 Rosa chinensis HOM05D003740 ORTHO05D004611 1.4e-135 486.9 417 64.7
ATR0782G053 Amborella trichopoda HOM05D003740 ORTHO05D004611 9.2e-135 484.2 279 86.0
AagrBONN_evm.TU.Sc2ySwM_344.2027 Anthoceros agrestis HOM05D003740 ORTHO05D004611 9.2e-135 484.2 373 66.0
Hund19125 Selenicereus undatus HOM05D003740 ORTHO05D004611 2.7e-134 482.6 383 69.2
DCAR_016970 Daucus carota HOM05D003740 ORTHO05D004611 5.1e-133 478.4 352 71.3
Medtr8g446850 Medicago truncatula HOM05D003740 ORTHO05D004611 8.9e-122 441.0 294 76.2
CARHR167400 Cardamine hirsuta HOM05D003740 ORTHO05D004611 4.6e-118 428.7 259 81.1
vmacro09044 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 1.1e-116 424.1 241 85.1
AUR62004393 Chenopodium quinoa HOM05D003740 ORTHO05D004611 3.6e-115 419.1 342 64.9
SMO112G0012 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 1.3e-112 410.6 271 75.3
TPR.G11551 Trifolium pratense HOM05D003740 ORTHO05D004611 2.2e-112 409.8 359 64.6
SHI12878 Sapria himalayana HOM05D003740 ORTHO05D004611 8.4e-112 407.9 333 61.9
AUR62022599 Chenopodium quinoa HOM05D003740 ORTHO05D004611 2.5e-108 396.4 335 62.7
Sp5g05360 Schrenkiella parvula HOM05D003740 ORTHO05D004611 1.9e-103 380.2 231 81.0
CiPaw.10G036600 Carya illinoinensis HOM05D003740 ORTHO05D004611 3.1e-98 362.8 211 84.4
Cre16.g663100 Chlamydomonas reinhardtii HOM05D003740 ORTHO05D004611 1.7e-96 357.1 387 51.7
AagrBONN_evm.TU.Sc2ySwM_368.1663 Anthoceros agrestis HOM05D003740 ORTHO05D004611 1.2e-94 350.9 389 49.6
PRCOL_00006546 Prasinoderma coloniale HOM05D003740 ORTHO05D004611 3.3e-92 342.8 376 50.0
CBR_g48687 Chara braunii HOM05D003740 ORTHO05D004611 2.4e-90 336.7 276 60.9
SEGI_25729 Sequoiadendron giganteum HOM05D003740 ORTHO05D004611 1.3e-85 320.9 196 80.1
SGA_v2.0_scaffold69G23130 Striga asiatica HOM05D003740 ORTHO05D004611 1.5e-76 290.8 268 60.8
MCO05G206 Micromonas commoda HOM05D003740 ORTHO05D004611 9.1e-66 255.0 302 47.0
Haze_26500 Corylus avellana HOM05D003740 ORTHO05D004611 5.9e-65 252.3 292 47.6
Cpa.g.sc120.7 Carica papaya HOM05D003740 ORTHO05D004611 8.5e-64 248.4 151 80.8
Aqoxy6G01654 Aquilegia oxysepala HOM05D003740 ORTHO05D004611 1.2e-62 244.6 222 59.0
Cfa024885 Carpinus fangiana HOM05D003740 ORTHO05D004611 1.0e-56 224.9 304 42.1
HPP92_001282 Vanilla planifolia HOM05D003740 ORTHO05D004611 5.0e-56 222.6 214 55.6
AagrBONN_evm.TU.Sc2ySwM_117.4057 Anthoceros agrestis HOM05D003740 ORTHO05D004611 5.7e-52 209.1 185 60.5
Psat6g050760 Pisum sativum HOM05D003740 ORTHO05D018044 1.8e-50 204.1 120 80.0
Actinidia17677 Actinidia chinensis HOM05D003740 ORTHO05D004611 1.9e-31 141.0 355 32.4
MBI05_g15360_MAGBIO Magnolia biondii HOM05D003740 ORTHO05D004611 8.3e-27 125.6 69 87.0
vmacro09045 Vaccinium macrocarpon HOM05D003740 ORTHO05D004611 1.4e-26 124.8 75 81.3
SMO112G0048 Selaginella moellendorffii HOM05D003740 ORTHO05D004611 1.1e-21 108.6 75 70.7
Cpa.g.c37387 Carica papaya HOM05D003740 ORTHO05D004611 1.7e-16 91.3 67 62.7
Nitab4.5_0001618g0330 Nicotiana tabacum HOM05D003740 ORTHO05D004611 1.1e-15 88.6 68 66.2
Psat6g009800 Pisum sativum HOM05D003740 ORTHO05D004611 1.2e-14 85.1 61 67.2
TPR.G40499 Trifolium pratense HOM05D003740 ORTHO05D004611 1.4e-13 81.6 60 65.0
Pp3c1_19750 Physcomitrium patens HOM05D003740 ORTHO05D004611 4.0e-13 80.1 123 43.1
BcaC02g11255 Brassica carinata HOM05D003740 ORTHO05D015230 1.9e-10 71.2 88 48.9
TPR.G13517 Trifolium pratense HOM05D003740 ORTHO05D027079 5.4e-10 69.7 50 64.0
A03p42520 Brassica napus HOM05D024621 ORTHO05D015230 4.3e-07 60.1 38 73.7
BNapus_Darmor_BZH_scaffold_38p00040 Brassica napus HOM05D003740 ORTHO05D027079 1.2e-06 58.5 49 61.2
BcaC09g48688 Brassica carinata HOM05D003740 ORTHO05D027079 2.8e-06 57.4 49 61.2
BolC4t23402H Brassica oleracea HOM05D003740 ORTHO05D015230 6.2e-06 56.2 35 68.6


User provided reference genes

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