Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1329 Ceratophyllum demersum HOM05D002198 ORTHO05D028680 7.4e-78 293.9 158 100.0
CDE08G0787 Ceratophyllum demersum HOM05D002198 ORTHO05D028680 5.0e-42 174.9 133 82.0
CDE06G2532 Ceratophyllum demersum HOM05D002198 ORTHO05D028680 3.1e-36 155.6 132 73.5
CDE06G0631 Ceratophyllum demersum HOM05D002198 ORTHO05D028680 2.0e-35 152.9 132 73.5
Gorai.009G211500 Gossypium raimondii HOM05D002198 ORTHO05D002409 1.6e-11 73.6 132 40.2
Gohir.D05G205200 Gossypium hirsutum HOM05D002198 ORTHO05D002409 3.5e-11 72.4 132 40.2
MSTRG.25094 Avicennia marina HOM05D002198 ORTHO05D002409 3.9e-10 68.9 128 39.8
TPR.G3756 Trifolium pratense HOM05D002198 ORTHO05D002409 5.1e-10 68.6 134 38.8
Lalb_Chr14g0368711 Lupinus albus HOM05D002198 ORTHO05D002409 1.9e-09 66.6 132 37.1
Thhalv10003156m.g Eutrema salsugineum HOM05D002198 ORTHO05D002409 9.5e-09 64.3 79 48.1
HPP92_011180 Vanilla planifolia HOM05D002198 ORTHO05D002409 9.5e-09 64.3 134 36.6
Lalb_Chr22g0355141 Lupinus albus HOM05D002198 ORTHO05D002409 2.1e-08 63.2 126 38.1
Os07g0619100 Oryza sativa ssp. japonica HOM05D002198 ORTHO05D002409 2.1e-08 63.2 134 34.3
PSO541G0218 Papaver somniferum HOM05D002198 ORTHO05D002409 2.8e-08 62.8 139 35.3
Aqoxy6G01330 Aquilegia oxysepala HOM05D002198 ORTHO05D002409 4.7e-08 62.0 133 34.6
Medtr1g019490 Medicago truncatula HOM05D002198 ORTHO05D002409 1.1e-07 60.8 130 36.9
Sp2g07610 Schrenkiella parvula HOM05D002198 ORTHO05D002409 1.1e-07 60.8 74 47.3
Lj4A55G38 Lonicera japonica HOM05D002198 ORTHO05D002409 1.4e-07 60.5 116 41.4
AT5G42880 Arabidopsis thaliana HOM05D002198 ORTHO05D002409 1.8e-07 60.1 74 47.3
MSTRG.24331 Avicennia marina HOM05D002198 ORTHO05D002409 1.8e-07 60.1 137 36.5
AL8G18070 Arabidopsis lyrata HOM05D002198 ORTHO05D002409 4.0e-07 58.9 74 47.3
HPP92_019275 Vanilla planifolia HOM05D002198 ORTHO05D002409 4.0e-07 58.9 127 34.6
Sc26g0004050 Simmondsia chinensis HOM05D002198 ORTHO05D002409 5.2e-07 58.5 134 35.1
BcaC02g10797 Brassica carinata HOM05D002198 ORTHO05D002409 8.9e-07 57.8 73 46.6
C04p25030 Brassica napus HOM05D002198 ORTHO05D002409 8.9e-07 57.8 73 46.6
BolC4t24003H Brassica oleracea HOM05D002198 ORTHO05D002409 8.9e-07 57.8 73 46.6
CARHR181260 Cardamine hirsuta HOM05D002198 ORTHO05D002409 1.5e-06 57.0 74 45.9
A06p48200 Brassica napus HOM05D002198 ORTHO05D002409 2.6e-06 56.2 73 43.8
ATR0618G153 Amborella trichopoda HOM05D002198 ORTHO05D002409 3.4e-06 55.8 141 36.2
BraA06t27689Z Brassica rapa HOM05D002198 ORTHO05D002409 4.4e-06 55.5 73 43.8
Gohir.D01G107800 Gossypium hirsutum HOM05D002198 ORTHO05D002409 4.4e-06 55.5 131 34.4
Gohir.D05G206000 Gossypium hirsutum HOM05D002198 ORTHO05D002409 7.6e-06 54.7 128 35.9
Gorai.009G212300 Gossypium raimondii HOM05D002198 ORTHO05D002409 7.6e-06 54.7 128 35.9


User provided reference genes

Program Settings