Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1312 Ceratophyllum demersum HOM05D005722 ORTHO05D007934 3.4e-275 951.0 478 100.0
Aqoxy1G01041 Aquilegia oxysepala HOM05D005722 ORTHO05D007934 1.0e-178 630.6 478 67.6
Nn2g13890 Nelumbo nucifera HOM05D005722 ORTHO05D007934 7.2e-177 624.4 485 66.4
Prupe.7G123300 Prunus persica HOM05D005722 ORTHO05D007934 9.4e-177 624.0 485 67.4
MBI18_g39612_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.2e-176 623.6 477 65.8
QL07p041452 Quercus lobata HOM05D005722 ORTHO05D007934 3.6e-176 622.1 494 65.4
Potri.006G119500 Populus trichocarpa HOM05D005722 ORTHO05D007934 2.3e-175 619.4 492 66.7
Ciclev10011424m.g Citrus clementina HOM05D005722 ORTHO05D007934 3.0e-175 619.0 418 73.9
Atru.chr8.1708 Acer truncatum HOM05D005722 ORTHO05D007934 4.0e-175 618.6 493 65.7
TAR623G1222 Trochodendron aralioides HOM05D005722 ORTHO05D007934 5.2e-175 618.2 479 68.1
FAN05G1451 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.2e-174 617.1 492 65.7
FAN05G4610 Fragaria x ananassa HOM05D005722 ORTHO05D007934 2.6e-174 615.9 492 65.4
COL.COLO4_22250 Corchorus olitorius HOM05D005722 ORTHO05D007934 3.4e-174 615.5 391 77.7
A03p01230 Brassica napus HOM05D005722 ORTHO05D007934 9.8e-174 614.0 390 76.9
RcHm_v2.0_Chr3g0471261 Rosa chinensis HOM05D005722 ORTHO05D007934 1.3e-173 613.6 439 70.6
Carub.0006s0238 Capsella rubella HOM05D005722 ORTHO05D007934 1.7e-173 613.2 415 73.0
PGSC0003DMG400003879 Solanum tuberosum HOM05D005722 ORTHO05D007934 2.2e-173 612.8 402 76.4
BraA03t09503Z Brassica rapa HOM05D005722 ORTHO05D007934 2.8e-173 612.5 390 76.7
PSO339G6299 Papaver somniferum HOM05D005722 ORTHO05D007934 2.8e-173 612.5 486 66.5
BolC3t12711H Brassica oleracea HOM05D005722 ORTHO05D007934 3.7e-173 612.1 390 76.7
THA.LOC104816667 Tarenaya hassleriana HOM05D005722 ORTHO05D007934 4.9e-173 611.7 390 77.2
C03p01590 Brassica napus HOM05D005722 ORTHO05D007934 6.3e-173 611.3 390 76.4
Haze_19473 Corylus avellana HOM05D005722 ORTHO05D007934 8.3e-173 610.9 391 77.2
Ah.08g211270 Amaranthus hybridus HOM05D005722 ORTHO05D007934 1.4e-172 610.1 393 77.6
CARHR209770 Cardamine hirsuta HOM05D005722 ORTHO05D007934 1.4e-172 610.1 390 76.9
MD12G1103200 Malus domestica HOM05D005722 ORTHO05D007934 1.4e-172 610.1 456 68.4
Lsat_1_v5_gn_2_20401 Lactuca sativa HOM05D005722 ORTHO05D007934 1.8e-172 609.8 445 69.0
Sabra06G0094100 Salix brachista HOM05D005722 ORTHO05D007934 2.4e-172 609.4 407 74.0
CSS0018899 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 3.1e-172 609.0 480 66.2
AUR62026979 Chenopodium quinoa HOM05D005722 ORTHO05D007934 3.1e-172 609.0 390 76.9
Gohir.A09G143300 Gossypium hirsutum HOM05D005722 ORTHO05D007934 3.1e-172 609.0 478 65.1
Thhalv10015725m.g Eutrema salsugineum HOM05D005722 ORTHO05D007934 4.1e-172 608.6 390 76.7
AT5G03555 Arabidopsis thaliana HOM05D005722 ORTHO05D007934 5.4e-172 608.2 390 76.9
CSS0022139 Camellia sinensis var. sinensis HOM05D005722 ORTHO05D007934 5.4e-172 608.2 414 73.7
FvH4_6g17170 Fragaria vesca HOM05D005722 ORTHO05D007934 5.4e-172 608.2 407 73.5
vmacro23004 Vaccinium macrocarpon HOM05D005722 ORTHO05D007934 7.0e-172 607.8 392 76.0
AL6G13040 Arabidopsis lyrata HOM05D005722 ORTHO05D007934 9.1e-172 607.4 390 76.7
Hma1.2p1_0547F.1_g176330 Hydrangea macrophylla HOM05D005722 ORTHO05D007934 9.1e-172 607.4 390 76.4
Sp6g39190 Schrenkiella parvula HOM05D005722 ORTHO05D007934 9.1e-172 607.4 390 76.4
CAN.G1038.3 Capsicum annuum HOM05D005722 ORTHO05D007934 1.2e-171 607.1 478 66.7
DCAR_015016 Daucus carota HOM05D005722 ORTHO05D007934 1.2e-171 607.1 391 76.2
Cfa016476 Carpinus fangiana HOM05D005722 ORTHO05D007934 2.0e-171 606.3 465 68.4
PSO063G5110 Papaver somniferum HOM05D005722 ORTHO05D007934 2.0e-171 606.3 393 75.8
Solyc09g008550.4 Solanum lycopersicum HOM05D005722 ORTHO05D007934 2.7e-171 605.9 409 74.1
AUR62042706 Chenopodium quinoa HOM05D005722 ORTHO05D007934 3.5e-171 605.5 423 71.9
Sopen09g003380 Solanum pennellii HOM05D005722 ORTHO05D007934 3.5e-171 605.5 410 74.4
Rhsim03G0086400 Rhododendron simsii HOM05D005722 ORTHO05D007934 4.5e-171 605.1 463 68.0
Gohir.D09G139500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 1.0e-170 604.0 391 74.9
Gorai.006G160000 Gossypium raimondii HOM05D005722 ORTHO05D007934 1.0e-170 604.0 391 74.9
Aa31LG1G21640 Aethionema arabicum HOM05D005722 ORTHO05D007934 1.3e-170 603.6 499 64.5
Lalb_Chr25g0288811 Lupinus albus HOM05D005722 ORTHO05D007934 1.3e-170 603.6 407 73.7
CiPaw.09G004900 Carya illinoinensis HOM05D005722 ORTHO05D007934 2.3e-170 602.8 414 73.2
TWI74G0410 Tripterygium wilfordii HOM05D005722 ORTHO05D007934 2.3e-170 602.8 477 65.6
Nitab4.5_0004731g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 3.8e-170 602.1 391 76.2
Lalb_Chr02g0155431 Lupinus albus HOM05D005722 ORTHO05D007934 6.6e-170 601.3 422 72.3
EL10Ac7g16706 Beta vulgaris HOM05D005722 ORTHO05D007934 1.1e-169 600.5 391 75.7
MSTRG.19206 Avicennia marina HOM05D005722 ORTHO05D007934 1.9e-169 599.7 499 64.5
Migut.J00472 Erythranthe guttata HOM05D005722 ORTHO05D007934 1.9e-169 599.7 391 75.2
Medtr1g062130 Medicago truncatula HOM05D005722 ORTHO05D007934 3.3e-169 599.0 462 67.3
Manes.09G048478 Manihot esculenta HOM05D005722 ORTHO05D007934 4.3e-169 598.6 471 67.9
Thecc.05G075200 Theobroma cacao HOM05D005722 ORTHO05D007934 4.3e-169 598.6 407 72.5
arahy.Tifrunner.gnm1.ann1.D7QF3J Arachis hypogaea HOM05D005722 ORTHO05D007934 7.2e-169 597.8 408 72.8
arahy.Tifrunner.gnm1.ann1.P0W3IN Arachis hypogaea HOM05D005722 ORTHO05D007934 7.2e-169 597.8 408 72.8
CANSAT56G0690 Cannabis sativa HOM05D005722 ORTHO05D007934 7.2e-169 597.8 484 64.5
Psat6g077240 Pisum sativum HOM05D005722 ORTHO05D007934 7.2e-169 597.8 450 68.4
TPR.G22453 Trifolium pratense HOM05D005722 ORTHO05D007934 9.5e-169 597.4 446 69.3
Cc06_g04740 Coffea canephora HOM05D005722 ORTHO05D007934 1.2e-168 597.0 393 75.8
Ca_04564_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 1.6e-168 596.7 391 75.4
PGR004G2571 Punica granatum HOM05D005722 ORTHO05D007934 1.6e-168 596.7 480 66.0
Lj1g0006800 Lotus japonicus HOM05D005722 ORTHO05D007934 2.1e-168 596.3 401 73.3
Peaxi162Scf00138g00041 Petunia axillaris HOM05D005722 ORTHO05D007934 2.8e-168 595.9 407 73.2
Duzib128G0866 Durio zibethinus HOM05D005722 ORTHO05D007934 3.6e-168 595.5 485 64.3
ECA238G3369 Erigeron canadensis HOM05D005722 ORTHO05D007934 1.4e-167 593.6 494 63.6
Phvul.007G226300 Phaseolus vulgaris HOM05D005722 ORTHO05D007934 1.4e-167 593.6 494 63.0
Cpa.g.sc5.129 Carica papaya HOM05D005722 ORTHO05D007934 1.8e-167 593.2 390 75.1
HanXRQChr14g0432851 Helianthus annuus HOM05D005722 ORTHO05D007934 8.9e-167 590.9 390 73.1
TPR.G31667 Trifolium pratense HOM05D005722 ORTHO05D007934 8.9e-167 590.9 458 66.6
Medtr7g102810 Medicago truncatula HOM05D005722 ORTHO05D007934 1.2e-166 590.5 467 65.5
Glyma.13G147700 Glycine max HOM05D005722 ORTHO05D007934 1.5e-166 590.1 478 63.8
VMungo0720G2103 Vigna mungo HOM05D005722 ORTHO05D007934 4.9e-165 585.1 430 67.9
Lj5g0013810 Lotus japonicus HOM05D005722 ORTHO05D007934 6.4e-165 584.7 462 65.4
SGA_v2.0_scaffold75G24819 Striga asiatica HOM05D005722 ORTHO05D007934 6.4e-165 584.7 398 72.9
FAN02G1363 Fragaria x ananassa HOM05D005722 ORTHO05D007934 1.4e-164 583.6 406 71.7
Psat3g038760 Pisum sativum HOM05D005722 ORTHO05D007934 1.4e-164 583.6 478 64.0
Glyma.10G063100 Glycine max HOM05D005722 ORTHO05D007934 4.1e-164 582.0 479 63.3
MELO3C009405.2 Cucumis melo HOM05D005722 ORTHO05D007934 5.4e-164 581.6 474 63.3
Sc20g0005780 Simmondsia chinensis HOM05D005722 ORTHO05D007934 5.4e-164 581.6 392 73.5
ClCG10G019670 Citrullus lanatus HOM05D005722 ORTHO05D007934 2.0e-163 579.7 458 64.2
unitig_578.g15784 Utricularia gibba HOM05D005722 ORTHO05D007934 3.5e-163 578.9 482 63.1
ATR0009G019 Amborella trichopoda HOM05D005722 ORTHO05D007934 1.0e-162 577.4 414 69.1
SalBow3G1081 Salvia bowleyana HOM05D005722 ORTHO05D007934 3.0e-162 575.9 390 72.8
SalBow3G1392 Salvia bowleyana HOM05D005722 ORTHO05D007934 3.0e-162 575.9 390 72.8
Sed0005717 Sechium edule HOM05D005722 ORTHO05D007934 5.0e-162 575.1 462 62.8
CsaV3_3G036500 Cucumis sativus L. HOM05D005722 ORTHO05D007934 8.0e-160 567.8 474 62.0
Gohir.D09G139600 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.6e-158 562.8 473 61.3
Ca_30109_v3 Cicer arietinum L. HOM05D005722 ORTHO05D007934 3.4e-158 562.4 374 73.5
Gorai.006G160100 Gossypium raimondii HOM05D005722 ORTHO05D007934 3.4e-158 562.4 473 61.1
Gohir.A09G143500 Gossypium hirsutum HOM05D005722 ORTHO05D007934 2.9e-157 559.3 475 60.8
MBI18_g39457_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 1.4e-156 557.0 421 66.7
MBI18_g31623_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 4.1e-156 555.4 421 66.7
SEGI_35570 Sequoiadendron giganteum HOM05D005722 ORTHO05D007934 9.2e-156 554.3 401 66.8
MBI18_g19054_MAGBIO Magnolia biondii HOM05D005722 ORTHO05D007934 3.9e-154 548.9 421 65.8
HPP92_025568 Vanilla planifolia HOM05D005722 ORTHO05D007934 1.2e-152 543.9 388 69.1
Os02g0666700 Oryza sativa ssp. japonica HOM05D005722 ORTHO05D007934 3.4e-150 535.8 396 66.2
Zm00001eb249990 Zea mays HOM05D005722 ORTHO05D007934 6.4e-149 531.6 398 65.1
FAN14G5091 Fragaria x ananassa HOM05D005722 ORTHO05D007934 8.3e-149 531.2 364 72.0
Nitab4.5_0003906g0050 Nicotiana tabacum HOM05D005722 ORTHO05D007934 3.0e-146 522.7 391 69.1
Dinv35829 Davidia involucrata HOM05D005722 ORTHO05D007934 3.9e-138 495.7 319 76.8
Pp3c14_20990 Physcomitrium patens HOM05D005722 ORTHO05D007934 1.9e-137 493.4 395 60.3
Eucgr.A01597 Eucalyptus grandis HOM05D005722 ORTHO05D007934 9.6e-137 491.1 393 64.4
Mapoly0002s0120 Marchantia polymorpha HOM05D005722 ORTHO05D007934 2.8e-136 489.6 395 58.7
Pp3c1_30640 Physcomitrium patens HOM05D005722 ORTHO05D007934 3.6e-136 489.2 394 60.4
Cc06_g04750 Coffea canephora HOM05D005722 ORTHO05D007934 1.1e-135 487.6 394 62.4
Cfa016468 Carpinus fangiana HOM05D005722 ORTHO05D007934 4.6e-131 472.2 354 68.6
GSVIVG01033705001 Vitis vinifera HOM05D005722 ORTHO05D007934 3.9e-130 469.2 390 62.6
SMO115G0026 Selaginella moellendorffii HOM05D005722 ORTHO05D007934 1.5e-129 467.2 401 58.1
Cre09.g389356 Chlamydomonas reinhardtii HOM05D005722 ORTHO05D007934 1.9e-121 440.3 402 53.5
Actinidia26637 Actinidia chinensis HOM05D005722 ORTHO05D007934 6.9e-119 431.8 391 59.1
MCO11G702 Micromonas commoda HOM05D005722 ORTHO05D007934 7.9e-115 418.3 415 50.8
Actinidia28931 Actinidia chinensis HOM05D005722 ORTHO05D007934 2.3e-114 416.8 348 62.9
PRCOL_00006021 Prasinoderma coloniale HOM05D005722 ORTHO05D007934 3.5e-107 392.9 410 48.5
Sc20g0005800 Simmondsia chinensis HOM05D005722 ORTHO05D007934 1.1e-89 334.7 240 71.7
Lj2P123T37 Lonicera japonica HOM05D005722 ORTHO05D007934 1.3e-88 331.3 232 73.7
Haze_19472 Corylus avellana HOM05D005722 ORTHO05D007934 2.8e-64 250.4 218 59.6
Cfa025019 Carpinus fangiana HOM05D005722 ORTHO05D123305 2.0e-49 201.1 408 30.6
Haze_02843 Corylus avellana HOM05D005722 ORTHO05D029153 6.4e-48 196.1 119 79.0
Pp3s34_270 Physcomitrium patens HOM05D005722 ORTHO05D317165 6.6e-37 159.5 439 26.7
Sc20g0005790 Simmondsia chinensis HOM05D005722 ORTHO05D029153 1.6e-35 154.8 93 74.2
TPR.G39511 Trifolium pratense HOM05D005722 ORTHO05D029153 7.3e-28 129.4 72 80.6
Lsat_1_v5_gn_4_152401 Lactuca sativa HOM05D005722 ORTHO05D007934 6.0e-22 109.8 80 76.2
FAN14G5603 Fragaria x ananassa HOM05D005722 ORTHO05D029153 1.6e-11 75.1 42 81.0
MCO11G808 Micromonas commoda HOM05D005722 ORTHO05D268580 1.6e-11 75.1 382 23.6
MCO10G252 Micromonas commoda HOM05D005722 ORTHO05D270642 1.2e-09 68.9 427 24.8
Cfa016469 Carpinus fangiana HOM05D005722 ORTHO05D125356 4.6e-06 57.0 28 85.7


User provided reference genes

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