Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CDE08G1301 Ceratophyllum demersum HOM05D006387 ORTHO05D008533 1.1e-118 429.9 209 100.0
MBI06_g39563_MAGBIO Magnolia biondii HOM05D006387 ORTHO05D008533 1.3e-85 320.1 195 79.0
Nn5g29908 Nelumbo nucifera HOM05D006387 ORTHO05D008533 4.8e-85 318.2 201 77.1
Thecc.01G091900 Theobroma cacao HOM05D006387 ORTHO05D008533 1.3e-82 310.1 195 74.9
QL06p047416 Quercus lobata HOM05D006387 ORTHO05D008533 6.6e-82 307.8 201 73.6
QL93p1865_0022 Quercus lobata HOM05D006387 ORTHO05D008533 6.6e-82 307.8 201 73.6
TWI53G0307 Tripterygium wilfordii HOM05D006387 ORTHO05D008533 6.6e-82 307.8 206 70.9
Cfa004350 Carpinus fangiana HOM05D006387 ORTHO05D008533 8.6e-82 307.4 206 71.8
MELO3C007722.2 Cucumis melo HOM05D006387 ORTHO05D008533 1.1e-81 307.0 201 73.1
Dinv13619 Davidia involucrata HOM05D006387 ORTHO05D008533 1.1e-81 307.0 195 75.4
CiPaw.01G046800 Carya illinoinensis HOM05D006387 ORTHO05D008533 1.9e-81 306.2 195 74.9
CsaV3_6G045090 Cucumis sativus L. HOM05D006387 ORTHO05D008533 2.5e-81 305.8 195 74.9
PSO541G2357 Papaver somniferum HOM05D006387 ORTHO05D008533 4.2e-81 305.1 195 75.9
Prupe.6G197200 Prunus persica HOM05D006387 ORTHO05D008533 7.2e-81 304.3 195 74.9
Sed0018819 Sechium edule HOM05D006387 ORTHO05D008533 1.2e-80 303.5 195 73.3
arahy.Tifrunner.gnm1.ann1.K640S8 Arachis hypogaea HOM05D006387 ORTHO05D008533 2.8e-80 302.4 207 72.5
arahy.Tifrunner.gnm1.ann1.ZYRR1K Arachis hypogaea HOM05D006387 ORTHO05D008533 2.8e-80 302.4 207 72.5
Gorai.007G233200 Gossypium raimondii HOM05D006387 ORTHO05D008533 6.1e-80 301.2 195 72.3
Rhsim08G0015000 Rhododendron simsii HOM05D006387 ORTHO05D008533 8.0e-80 300.8 195 74.4
PGR102G1540 Punica granatum HOM05D006387 ORTHO05D008533 1.0e-79 300.4 208 69.7
vmacro18567 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.0e-79 300.4 195 74.4
Cpa.g.sc55.48 Carica papaya HOM05D006387 ORTHO05D008533 1.4e-79 300.1 205 69.3
TPR.G14610 Trifolium pratense HOM05D006387 ORTHO05D008533 1.4e-79 300.1 207 68.6
Aqoxy6G01447 Aquilegia oxysepala HOM05D006387 ORTHO05D008533 1.8e-79 299.7 197 73.1
Ca_22597_v3 Cicer arietinum L. HOM05D006387 ORTHO05D008533 1.8e-79 299.7 195 72.3
Lju188A1T76 Lonicera japonica HOM05D006387 ORTHO05D008533 4.0e-79 298.5 195 71.8
Glyma.18G146100 Glycine max HOM05D006387 ORTHO05D008533 5.2e-79 298.1 207 69.6
Nitab4.5_0001468g0050 Nicotiana tabacum HOM05D006387 ORTHO05D008533 5.2e-79 298.1 202 70.3
Nitab4.5_0010196g0030 Nicotiana tabacum HOM05D006387 ORTHO05D008533 6.8e-79 297.7 195 72.3
Sc16g0000480 Simmondsia chinensis HOM05D006387 ORTHO05D008533 6.8e-79 297.7 195 72.8
Potri.007G010400 Populus trichocarpa HOM05D006387 ORTHO05D008533 1.5e-78 296.6 195 73.8
Lj4A270T42 Lonicera japonica HOM05D006387 ORTHO05D008533 2.0e-78 296.2 195 71.3
MD15G1314800 Malus domestica HOM05D006387 ORTHO05D008533 2.6e-78 295.8 195 72.3
Manes.12G127300 Manihot esculenta HOM05D006387 ORTHO05D008533 2.6e-78 295.8 206 69.4
Sabra07G0007900 Salix brachista HOM05D006387 ORTHO05D008533 3.4e-78 295.4 206 69.9
RcHm_v2.0_Chr2g0111431 Rosa chinensis HOM05D006387 ORTHO05D008533 4.4e-78 295.0 195 72.3
EL10Ac6g15218 Beta vulgaris HOM05D006387 ORTHO05D008533 7.5e-78 294.3 195 71.8
Haze_15057 Corylus avellana HOM05D000344 ORTHO05D000934 9.8e-78 293.9 185 76.2
Lj4g0015074 Lotus japonicus HOM05D006387 ORTHO05D008533 1.7e-77 293.1 194 72.2
Sopen11g005290 Solanum pennellii HOM05D006387 ORTHO05D008533 2.2e-77 292.7 195 70.8
Atru.chr3.1288 Acer truncatum HOM05D006387 ORTHO05D008533 2.8e-77 292.4 205 68.8
Medtr8g068855 Medicago truncatula HOM05D006387 ORTHO05D008533 2.8e-77 292.4 195 70.3
PGSC0003DMG400016205 Solanum tuberosum HOM05D006387 ORTHO05D008533 2.8e-77 292.4 206 67.5
Peaxi162Scf00447g00119 Petunia axillaris HOM05D006387 ORTHO05D008533 3.7e-77 292.0 209 67.5
MSTRG.15694 Avicennia marina HOM05D006387 ORTHO05D008533 6.3e-77 291.2 195 70.3
Gohir.D11G217100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 8.3e-77 290.8 195 71.3
Lalb_Chr05g0228491 Lupinus albus HOM05D006387 ORTHO05D008533 1.1e-76 290.4 195 70.3
Solyc11g010510.2 Solanum lycopersicum HOM05D006387 ORTHO05D008533 1.4e-76 290.0 206 67.0
SalBow5G0849 Salvia bowleyana HOM05D006387 ORTHO05D008533 1.8e-76 289.7 195 69.7
Aa31LG6G15050 Aethionema arabicum HOM05D006387 ORTHO05D008533 2.4e-76 289.3 195 70.3
Cc07_g14250 Coffea canephora HOM05D006387 ORTHO05D008533 2.4e-76 289.3 203 67.0
Psat4g119200 Pisum sativum HOM05D006387 ORTHO05D008533 2.4e-76 289.3 195 69.2
THA.LOC104804173 Tarenaya hassleriana HOM05D006387 ORTHO05D008533 3.1e-76 288.9 195 70.3
A04p09020 Brassica napus HOM05D006387 ORTHO05D008533 7.0e-76 287.7 195 70.3
BraA04t16597Z Brassica rapa HOM05D006387 ORTHO05D008533 7.0e-76 287.7 195 70.3
Migut.K00786 Erythranthe guttata HOM05D006387 ORTHO05D008533 7.0e-76 287.7 195 69.2
Carub.0007s0212 Capsella rubella HOM05D006387 ORTHO05D008533 9.2e-76 287.3 196 70.4
Duzib187G0618 Durio zibethinus HOM05D006387 ORTHO05D008533 9.2e-76 287.3 195 70.3
C04p42900 Brassica napus HOM05D006387 ORTHO05D008533 1.2e-75 287.0 195 70.3
AUR62003651 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.6e-75 286.6 195 69.7
FAN26G1841 Fragaria x ananassa HOM05D006387 ORTHO05D008533 1.6e-75 286.6 195 70.8
Gohir.A11G206500 Gossypium hirsutum HOM05D006387 ORTHO05D008533 2.0e-75 286.2 195 69.7
Zm00001eb038350 Zea mays HOM05D006387 ORTHO05D008533 2.0e-75 286.2 196 69.4
ECA238G0943 Erigeron canadensis HOM05D006387 ORTHO05D008533 3.5e-75 285.4 195 70.3
Eucgr.H04725 Eucalyptus grandis HOM05D006387 ORTHO05D008533 3.5e-75 285.4 195 68.7
FvH4_1g19820 Fragaria vesca HOM05D006387 ORTHO05D008533 3.5e-75 285.4 195 70.8
BcaC02g09451 Brassica carinata HOM05D006387 ORTHO05D008533 4.5e-75 285.0 195 69.7
Thhalv10026114m.g Eutrema salsugineum HOM05D006387 ORTHO05D008533 4.5e-75 285.0 203 66.5
Os08g0478100 Oryza sativa ssp. japonica HOM05D006387 ORTHO05D008533 4.5e-75 285.0 193 70.5
CAN.G1388.12 Capsicum annuum HOM05D006387 ORTHO05D008533 5.9e-75 284.6 195 68.2
Ciclev10026362m.g Citrus clementina HOM05D006387 ORTHO05D008533 7.8e-75 284.3 195 68.7
BcaNung03133 Brassica carinata HOM05D006387 ORTHO05D008533 1.3e-74 283.5 195 68.7
BolC4t25859H Brassica oleracea HOM05D006387 ORTHO05D008533 1.3e-74 283.5 195 69.2
AUR62017959 Chenopodium quinoa HOM05D006387 ORTHO05D008533 1.7e-74 283.1 195 69.2
HanXRQChr14g0442661 Helianthus annuus HOM05D006387 ORTHO05D008533 3.9e-74 282.0 195 68.7
ATR0022G066 Amborella trichopoda HOM05D006387 ORTHO05D008533 1.1e-73 280.4 193 69.9
unitig_748.g8645 Utricularia gibba HOM05D006387 ORTHO05D008533 1.1e-73 280.4 185 72.4
Sp7g10120 Schrenkiella parvula HOM05D006387 ORTHO05D008533 2.5e-73 279.3 195 68.2
Hund16539 Selenicereus undatus HOM05D006387 ORTHO05D008533 2.5e-73 279.3 187 70.6
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 4.3e-73 278.5 194 67.5
FAN19G3199 Fragaria x ananassa HOM05D006387 ORTHO05D008533 5.6e-73 278.1 191 70.7
AL7G12534 Arabidopsis lyrata HOM05D006387 ORTHO05D008533 2.8e-72 275.8 198 67.2
Lsat_1_v5_gn_2_70881 Lactuca sativa HOM05D006387 ORTHO05D008533 1.0e-71 273.9 195 68.2
ClCG01G018420 Citrullus lanatus HOM05D006387 ORTHO05D008533 2.3e-71 272.7 195 68.2
GSVIVG01003594001 Vitis vinifera HOM05D006387 ORTHO05D008533 8.9e-71 270.8 195 65.6
GSVIVG01006732001 Vitis vinifera HOM05D006387 ORTHO05D008533 8.9e-71 270.8 195 65.6
Phvul.003G289400 Phaseolus vulgaris HOM05D006387 ORTHO05D008533 2.2e-69 266.2 195 63.6
CANSAT01G3264 Cannabis sativa HOM05D006387 ORTHO05D008533 3.7e-69 265.4 162 79.6
Actinidia26608 Actinidia chinensis HOM05D006387 ORTHO05D008533 1.4e-68 263.5 201 65.2
SEGI_33925 Sequoiadendron giganteum HOM05D006387 ORTHO05D008533 3.3e-65 252.3 195 59.0
FAN28G2490 Fragaria x ananassa HOM05D006387 ORTHO05D008533 9.5e-65 250.8 176 71.0
vmacro09229 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 7.8e-59 231.1 145 77.2
Glyma.08G280000 Glycine max HOM05D006387 ORTHO05D008533 8.1e-56 221.1 140 77.9
CSS0019105 Camellia sinensis var. sinensis HOM05D006387 ORTHO05D008533 1.1e-55 220.7 128 82.8
AT4G38090 Arabidopsis thaliana HOM05D006387 ORTHO05D008533 1.6e-51 206.8 128 78.1
Pp3c7_18820 Physcomitrium patens HOM05D006387 ORTHO05D008533 1.2e-46 190.7 187 49.2
AagrBONN_evm.TU.Sc2ySwM_344.3556 Anthoceros agrestis HOM05D006387 ORTHO05D008533 3.2e-44 182.6 152 55.3
SMO361G0736 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.3e-42 177.2 130 67.7
vmacro14991 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 1.7e-42 176.8 156 58.3
Gorai.007G059200 Gossypium raimondii HOM05D006387 ORTHO05D008533 1.5e-41 173.7 219 44.7
Cre10.g448800 Chlamydomonas reinhardtii HOM05D006387 ORTHO05D008533 6.9e-39 164.9 185 45.4
Gohir.D11G054100 Gossypium hirsutum HOM05D006387 ORTHO05D008533 9.0e-39 164.5 219 43.8
VMungo0251G0198 Vigna mungo HOM05D006387 ORTHO05D008533 2.1e-35 153.3 94 79.8
Gohir.A11G050750 Gossypium hirsutum HOM05D006387 ORTHO05D008533 1.3e-34 150.6 226 40.7
CARHR246490 Cardamine hirsuta HOM05D006387 ORTHO05D008533 2.8e-32 142.9 95 73.7
FAN23G2995 Fragaria x ananassa HOM05D006387 ORTHO05D008533 4.8e-32 142.1 91 75.8
HPP92_016734 Vanilla planifolia HOM05D006387 ORTHO05D008533 6.2e-32 141.7 122 57.4
MCO03G602 Micromonas commoda HOM05D006387 ORTHO05D008533 4.0e-31 139.0 192 39.1
SMO361G0739 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 4.0e-31 139.0 98 67.3
SMO361G0500 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.2e-30 137.5 142 49.3
PRCOL_00004912 Prasinoderma coloniale HOM05D006387 ORTHO05D008533 1.7e-29 133.7 188 39.9
TPR.G1343 Trifolium pratense HOM05D000744 ORTHO05D000332 1.2e-27 127.5 95 62.1
vmacro10806 Vaccinium macrocarpon HOM05D006387 ORTHO05D008533 2.1e-27 126.7 112 58.0
RcHm_v2.0_Chr2g0111411 Rosa chinensis HOM05D006387 ORTHO05D008533 6.7e-26 121.7 128 54.7
COL.COLO4_27345 Corchorus olitorius HOM05D000344 ORTHO05D000934 8.2e-16 88.2 59 67.8
Ah.03g140080 Amaranthus hybridus HOM05D006387 ORTHO05D008533 4.5e-14 82.4 69 47.8
Hma1.2p1_0119F.1_g056580 Hydrangea macrophylla HOM05D006387 ORTHO05D008533 1.1e-12 77.8 52 67.3
SMO004G0012 Selaginella moellendorffii HOM05D006387 ORTHO05D008533 1.9e-12 77.0 64 57.8
HanXRQChr16g0520881 Helianthus annuus HOM05D006387 ORTHO05D008533 1.1e-09 67.8 49 67.3
HPP92_016750 Vanilla planifolia HOM05D006387 ORTHO05D008533 9.0e-07 58.2 68 50.0
Actinidia06523 Actinidia chinensis HOM05D009440 ORTHO05D011919 3.4e-06 56.2 37 73.0


User provided reference genes

Program Settings